Samia BLAST Result against celegans

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= S06A01NCLL0023_L08
         (267 letters)

Database: celegans 
           27,780 sequences; 12,740,198 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

Z81117-9|CAB03317.2|  333|Caenorhabditis elegans Hypothetical pr...    30   0.20 
AF047657-2|AAK18950.2|  358|Caenorhabditis elegans Serpentine re...    30   0.20 
U40799-4|AAA81482.1|  426|Caenorhabditis elegans Hypothetical pr...    27   1.4  
AL110498-4|CAE18014.2|  336|Caenorhabditis elegans Hypothetical ...    27   1.8  
Z36752-1|CAA85323.2|  150|Caenorhabditis elegans Hypothetical pr...    27   2.4  
AL117199-3|CAB55043.3|  868|Caenorhabditis elegans Hypothetical ...    26   3.2  
AF003385-7|AAB54247.1|  381|Caenorhabditis elegans Serpentine re...    26   4.2  
AC024835-2|AAK68537.1|  684|Caenorhabditis elegans Hypothetical ...    26   4.2  
AF399825-1|AAK77200.1| 1262|Caenorhabditis elegans separase prot...    25   5.6  
AC024791-1|AAF60651.1| 1262|Caenorhabditis elegans Separase prot...    25   5.6  
Z83231-2|CAB05750.1|  357|Caenorhabditis elegans Hypothetical pr...    25   7.4  
Z81506-8|CAB04125.2|  225|Caenorhabditis elegans Hypothetical pr...    25   7.4  
Z80219-7|CAN86594.1|  804|Caenorhabditis elegans Hypothetical pr...    25   7.4  
Z80219-6|CAI70409.1|  734|Caenorhabditis elegans Hypothetical pr...    25   7.4  
Z80219-5|CAB02302.2|  784|Caenorhabditis elegans Hypothetical pr...    25   7.4  
Z75546-12|CAN86896.1|  804|Caenorhabditis elegans Hypothetical p...    25   7.4  
Z75546-11|CAI70402.1|  734|Caenorhabditis elegans Hypothetical p...    25   7.4  
Z75546-10|CAA99896.2|  784|Caenorhabditis elegans Hypothetical p...    25   7.4  
Z54327-9|CAA91122.2|  839|Caenorhabditis elegans Hypothetical pr...    25   7.4  
AF016449-12|AAG24004.2|  365|Caenorhabditis elegans Serpentine r...    25   7.4  
AC006777-6|AAK72307.1|  517|Caenorhabditis elegans Hypothetical ...    25   9.7  

>Z81117-9|CAB03317.2|  333|Caenorhabditis elegans Hypothetical
           protein T06E6.8 protein.
          Length = 333

 Score = 30.3 bits (65), Expect = 0.20
 Identities = 20/68 (29%), Positives = 35/68 (51%)
 Frame = +2

Query: 8   VFFLLPRVYLNI*FSKFPYLQVSPVSTLTHTRGLYISIFQIYLLLSCTKSLETLNYKLFD 187
           + F +    L + F  FP L  +P+  LT   G+  S FQIYL  +   ++   +  +F+
Sbjct: 55  ILFDISVTALTMPFLVFPVLGAAPLGILTTMFGVS-SDFQIYLEFTLLFTVLFSDMLIFE 113

Query: 188 NKLFKWFA 211
           N+ ++ FA
Sbjct: 114 NRYYQLFA 121


>AF047657-2|AAK18950.2|  358|Caenorhabditis elegans Serpentine
           receptor, class h protein270 protein.
          Length = 358

 Score = 30.3 bits (65), Expect = 0.20
 Identities = 22/64 (34%), Positives = 34/64 (53%)
 Frame = +2

Query: 47  FSKFPYLQVSPVSTLTHTRGLYISIFQIYLLLSCTKSLETLNYKLFDNKLFKWFAYKN*N 226
           F  FP     P+  L +T G+ I + Q YL+L    +L +    LF+N+ F  FA K+ +
Sbjct: 75  FVLFPAFAGFPLGVLKYT-GISIDV-QTYLILISYSALGSSILTLFENRYFLMFA-KHSS 131

Query: 227 AKNY 238
            +NY
Sbjct: 132 WRNY 135


>U40799-4|AAA81482.1|  426|Caenorhabditis elegans Hypothetical
           protein F42C5.2 protein.
          Length = 426

 Score = 27.5 bits (58), Expect = 1.4
 Identities = 11/26 (42%), Positives = 18/26 (69%), Gaps = 1/26 (3%)
 Frame = +3

Query: 186 IINYSNGLHTKI-KMQKIMKSSNIKC 260
           I NY+NG H K+ K  + + ++N+KC
Sbjct: 9   IKNYANGFHQKLCKFDEPVTANNVKC 34


>AL110498-4|CAE18014.2|  336|Caenorhabditis elegans Hypothetical
           protein Y64G10A.8 protein.
          Length = 336

 Score = 27.1 bits (57), Expect = 1.8
 Identities = 9/29 (31%), Positives = 15/29 (51%)
 Frame = -1

Query: 153 FVHDNSKYIWNMEMYRPRVCVSVLTGDTC 67
           F+H +  Y W++ MY    C  + T + C
Sbjct: 75  FLHTSDLYNWHVAMYETSSCDIISTSERC 103


>Z36752-1|CAA85323.2|  150|Caenorhabditis elegans Hypothetical
           protein F35H8.1 protein.
          Length = 150

 Score = 26.6 bits (56), Expect = 2.4
 Identities = 10/19 (52%), Positives = 12/19 (63%)
 Frame = -1

Query: 165 VSSDFVHDNSKYIWNMEMY 109
           VS DF +D  K IWN + Y
Sbjct: 51  VSRDFTYDTCKGIWNRDKY 69


>AL117199-3|CAB55043.3|  868|Caenorhabditis elegans Hypothetical
           protein Y43F11A.5 protein.
          Length = 868

 Score = 26.2 bits (55), Expect = 3.2
 Identities = 10/21 (47%), Positives = 16/21 (76%)
 Frame = +2

Query: 158 LETLNYKLFDNKLFKWFAYKN 220
           L  +NY+LF+N+LF + A K+
Sbjct: 518 LSRVNYELFENELFAFLAEKS 538


>AF003385-7|AAB54247.1|  381|Caenorhabditis elegans Serpentine
           receptor, class w protein7 protein.
          Length = 381

 Score = 25.8 bits (54), Expect = 4.2
 Identities = 19/72 (26%), Positives = 33/72 (45%)
 Frame = +2

Query: 2   HEVFFLLPRVYLNI*FSKFPYLQVSPVSTLTHTRGLYISIFQIYLLLSCTKSLETLNYKL 181
           HEV ++L RVY+   F +F ++ +  ++ LT  R L  ++    ++  C          +
Sbjct: 45  HEVLYILSRVYVVFSFIQF-FINIFHMTVLTR-RELRTNLVYQVMIAICIGETAQAFVTM 102

Query: 182 FDNKLFKWFAYK 217
           FD  L     YK
Sbjct: 103 FDEFLTWNIFYK 114


>AC024835-2|AAK68537.1|  684|Caenorhabditis elegans Hypothetical
           protein Y57E12B.3 protein.
          Length = 684

 Score = 25.8 bits (54), Expect = 4.2
 Identities = 8/24 (33%), Positives = 18/24 (75%)
 Frame = +2

Query: 62  YLQVSPVSTLTHTRGLYISIFQIY 133
           +  ++PV+ ++H +GL+ ++ QIY
Sbjct: 440 FFAMAPVARMSHVKGLFQNLGQIY 463


>AF399825-1|AAK77200.1| 1262|Caenorhabditis elegans separase
           protein.
          Length = 1262

 Score = 25.4 bits (53), Expect = 5.6
 Identities = 12/31 (38%), Positives = 16/31 (51%)
 Frame = -1

Query: 162 SSDFVHDNSKYIWNMEMYRPRVCVSVLTGDT 70
           S+ +VH  S   W+ EM R    V+V T  T
Sbjct: 298 SNYYVHIGSTIAWHFEMRRECALVNVTTAQT 328


>AC024791-1|AAF60651.1| 1262|Caenorhabditis elegans Separase protein
           1 protein.
          Length = 1262

 Score = 25.4 bits (53), Expect = 5.6
 Identities = 12/31 (38%), Positives = 16/31 (51%)
 Frame = -1

Query: 162 SSDFVHDNSKYIWNMEMYRPRVCVSVLTGDT 70
           S+ +VH  S   W+ EM R    V+V T  T
Sbjct: 298 SNYYVHIGSTIAWHFEMRRECALVNVTTAQT 328


>Z83231-2|CAB05750.1|  357|Caenorhabditis elegans Hypothetical
           protein F57G9.2 protein.
          Length = 357

 Score = 25.0 bits (52), Expect = 7.4
 Identities = 15/46 (32%), Positives = 21/46 (45%)
 Frame = +1

Query: 46  IFKVPLLTSITSEYTNTYSRSVHLHIPNIFTIIMYKVTGNFELQII 183
           I  V    +I S Y   Y     ++IP I TII   ++ +  L II
Sbjct: 140 ILAVATERTIASVYIKDYESKERIYIPIILTIISQLLSISISLAII 185


>Z81506-8|CAB04125.2|  225|Caenorhabditis elegans Hypothetical
           protein F16H6.7 protein.
          Length = 225

 Score = 25.0 bits (52), Expect = 7.4
 Identities = 13/39 (33%), Positives = 18/39 (46%)
 Frame = +3

Query: 144 HVQSHWKL*ITNYLIINYSNGLHTKIKMQKIMKSSNIKC 260
           H+ SH +  +       YSNG   K K  KI +   +KC
Sbjct: 92  HLCSHSQKNVIEIFQSAYSNGYTEKDKKGKIPEGGKVKC 130


>Z80219-7|CAN86594.1|  804|Caenorhabditis elegans Hypothetical
           protein T01H8.1e protein.
          Length = 804

 Score = 25.0 bits (52), Expect = 7.4
 Identities = 13/41 (31%), Positives = 23/41 (56%), Gaps = 3/41 (7%)
 Frame = +1

Query: 67  TSITSEYTNTYSRSVHLHIP---NIFTIIMYKVTGNFELQI 180
           T  +S+ TNT+  S+H+  P   N F ++ +K   + E +I
Sbjct: 41  TDCSSDTTNTFHSSIHIIQPPPNNGFRLMNWKTDSSSETEI 81


>Z80219-6|CAI70409.1|  734|Caenorhabditis elegans Hypothetical
           protein T01H8.1d protein.
          Length = 734

 Score = 25.0 bits (52), Expect = 7.4
 Identities = 13/41 (31%), Positives = 23/41 (56%), Gaps = 3/41 (7%)
 Frame = +1

Query: 67  TSITSEYTNTYSRSVHLHIP---NIFTIIMYKVTGNFELQI 180
           T  +S+ TNT+  S+H+  P   N F ++ +K   + E +I
Sbjct: 28  TDCSSDTTNTFHSSIHIIQPPPNNGFRLMNWKTDSSSETEI 68


>Z80219-5|CAB02302.2|  784|Caenorhabditis elegans Hypothetical
           protein T01H8.1a protein.
          Length = 784

 Score = 25.0 bits (52), Expect = 7.4
 Identities = 13/41 (31%), Positives = 23/41 (56%), Gaps = 3/41 (7%)
 Frame = +1

Query: 67  TSITSEYTNTYSRSVHLHIP---NIFTIIMYKVTGNFELQI 180
           T  +S+ TNT+  S+H+  P   N F ++ +K   + E +I
Sbjct: 47  TDCSSDTTNTFHSSIHIIQPPPNNGFRLMNWKTDSSSETEI 87


>Z75546-12|CAN86896.1|  804|Caenorhabditis elegans Hypothetical
           protein T01H8.1e protein.
          Length = 804

 Score = 25.0 bits (52), Expect = 7.4
 Identities = 13/41 (31%), Positives = 23/41 (56%), Gaps = 3/41 (7%)
 Frame = +1

Query: 67  TSITSEYTNTYSRSVHLHIP---NIFTIIMYKVTGNFELQI 180
           T  +S+ TNT+  S+H+  P   N F ++ +K   + E +I
Sbjct: 41  TDCSSDTTNTFHSSIHIIQPPPNNGFRLMNWKTDSSSETEI 81


>Z75546-11|CAI70402.1|  734|Caenorhabditis elegans Hypothetical
           protein T01H8.1d protein.
          Length = 734

 Score = 25.0 bits (52), Expect = 7.4
 Identities = 13/41 (31%), Positives = 23/41 (56%), Gaps = 3/41 (7%)
 Frame = +1

Query: 67  TSITSEYTNTYSRSVHLHIP---NIFTIIMYKVTGNFELQI 180
           T  +S+ TNT+  S+H+  P   N F ++ +K   + E +I
Sbjct: 28  TDCSSDTTNTFHSSIHIIQPPPNNGFRLMNWKTDSSSETEI 68


>Z75546-10|CAA99896.2|  784|Caenorhabditis elegans Hypothetical
           protein T01H8.1a protein.
          Length = 784

 Score = 25.0 bits (52), Expect = 7.4
 Identities = 13/41 (31%), Positives = 23/41 (56%), Gaps = 3/41 (7%)
 Frame = +1

Query: 67  TSITSEYTNTYSRSVHLHIP---NIFTIIMYKVTGNFELQI 180
           T  +S+ TNT+  S+H+  P   N F ++ +K   + E +I
Sbjct: 47  TDCSSDTTNTFHSSIHIIQPPPNNGFRLMNWKTDSSSETEI 87


>Z54327-9|CAA91122.2|  839|Caenorhabditis elegans Hypothetical
           protein C26D10.4 protein.
          Length = 839

 Score = 25.0 bits (52), Expect = 7.4
 Identities = 12/45 (26%), Positives = 23/45 (51%)
 Frame = +2

Query: 47  FSKFPYLQVSPVSTLTHTRGLYISIFQIYLLLSCTKSLETLNYKL 181
           +S+FP    + +   ++   L +S+F  + L +CT   E +  KL
Sbjct: 224 YSEFPVAATTYLGVDSNVTPLKLSLFFDFFLATCTSEEEFIKNKL 268


>AF016449-12|AAG24004.2|  365|Caenorhabditis elegans Serpentine
           receptor, class t protein71 protein.
          Length = 365

 Score = 25.0 bits (52), Expect = 7.4
 Identities = 17/63 (26%), Positives = 28/63 (44%), Gaps = 6/63 (9%)
 Frame = +3

Query: 96  ILAVCTSPYSKYIYYY------HVQSHWKL*ITNYLIINYSNGLHTKIKMQKIMKSSNIK 257
           +L +CTS    YI Y+      +  S W       + +   N   +K K+QKI+  + + 
Sbjct: 162 VLVLCTSTLYCYISYHLLFNFGYSTSSWLYKSKRQVFLIVENIFKSKKKLQKIIFQAAML 221

Query: 258 CTF 266
           C F
Sbjct: 222 CIF 224


>AC006777-6|AAK72307.1|  517|Caenorhabditis elegans Hypothetical
           protein Y46H3D.4 protein.
          Length = 517

 Score = 24.6 bits (51), Expect = 9.7
 Identities = 12/56 (21%), Positives = 24/56 (42%)
 Frame = +2

Query: 53  KFPYLQVSPVSTLTHTRGLYISIFQIYLLLSCTKSLETLNYKLFDNKLFKWFAYKN 220
           +F Y + + +  L     ++     + +  S   +LE LN+    N    ++AY N
Sbjct: 88  QFSYTKYASIEFLLSLEEIHCDAVTLGVSFSFNSNLEVLNFNNLTNITCDFYAYNN 143


  Database: celegans
    Posted date:  Oct 23, 2007  1:18 PM
  Number of letters in database: 12,740,198
  Number of sequences in database:  27,780
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 5,641,021
Number of Sequences: 27780
Number of extensions: 102653
Number of successful extensions: 276
Number of sequences better than 10.0: 21
Number of HSP's better than 10.0 without gapping: 271
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 276
length of database: 12,740,198
effective HSP length: 67
effective length of database: 10,878,938
effective search space used: 228457698
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)