Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= S06A01NCLL0023_L06
(209 letters)
Database: rice
37,544 sequences; 14,793,348 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
11_02_0058 + 7879859-7879951,7880844-7881078,7881165-7881535,788... 80 2e-16
03_05_0974 + 29324025-29324117,29325064-29325298,29325385-293257... 78 8e-16
07_03_0994 + 23190344-23190456,23191367-23191581,23191663-231918... 74 2e-14
03_02_0186 - 6243487-6243799,6243892-6244400,6244495-6244557,624... 73 4e-14
05_01_0412 - 3248405-3248458,3248533-3248637,3248950-3249078,324... 42 7e-05
05_04_0306 + 20058640-20059159,20060406-20060819,20060921-200611... 40 2e-04
01_02_0004 - 10097759-10098438,10098973-10099242,10099956-10100349 40 3e-04
01_06_1060 + 34162161-34162554,34162613-34162675,34163262-341635... 39 6e-04
06_03_1086 - 27494238-27494914,27495471-27495740,27495986-27496379 38 0.001
03_05_0575 + 25747813-25748206,25748567-25748614,25750296-257505... 38 0.001
03_01_0034 + 318432-318825,318902-319851 38 0.001
02_01_0499 + 3619909-3620302,3621123-3621392,3621788-3622467 38 0.001
03_06_0176 + 32158462-32158855,32159960-32160229,32160328-32160998 37 0.003
09_06_0269 - 21947847-21947904,21947988-21948169,21948268-219489... 27 1.6
08_02_1414 + 26901937-26902597,26903361-26903397,26903733-269037... 27 2.7
03_05_1078 + 30205876-30206346,30206624-30207001,30207967-302080... 26 4.8
01_05_0685 + 24273331-24273569,24275429-24275465,24275739-242758... 26 4.8
01_01_0524 - 3845637-3845727,3845803-3845896,3846415-3846497,384... 26 4.8
07_03_0741 - 21107566-21107838,21107964-21108102,21108189-211084... 25 6.3
04_01_0383 + 5085697-5085724,5085816-5085927,5087249-5087285,508... 25 6.3
02_01_0108 - 789597-790224,790441-790570,790946-791081 25 6.3
09_06_0115 + 20944586-20945185 25 8.4
02_03_0229 + 16617371-16617970 25 8.4
>11_02_0058 +
7879859-7879951,7880844-7881078,7881165-7881535,
7881648-7882304
Length = 451
Score = 80.2 bits (189), Expect = 2e-16
Identities = 30/37 (81%), Positives = 35/37 (94%)
Frame = +1
Query: 97 ECISVHVGQAGVQIGNACWELYCLEHGIQPDGQISTD 207
ECIS+H+GQAG+Q+GNACWELYCLEHGIQPDGQ+ D
Sbjct: 3 ECISIHIGQAGIQVGNACWELYCLEHGIQPDGQMPGD 39
>03_05_0974 +
29324025-29324117,29325064-29325298,29325385-29325755,
29325864-29326520
Length = 451
Score = 78.2 bits (184), Expect = 8e-16
Identities = 29/37 (78%), Positives = 35/37 (94%)
Frame = +1
Query: 97 ECISVHVGQAGVQIGNACWELYCLEHGIQPDGQISTD 207
ECIS+H+GQAG+Q+GNACWELYCLEHGIQ DGQ+ +D
Sbjct: 3 ECISIHIGQAGIQVGNACWELYCLEHGIQADGQMPSD 39
>07_03_0994 +
23190344-23190456,23191367-23191581,23191663-23191862,
23192420-23192928,23193048-23193363
Length = 450
Score = 73.7 bits (173), Expect = 2e-14
Identities = 27/37 (72%), Positives = 34/37 (91%)
Frame = +1
Query: 97 ECISVHVGQAGVQIGNACWELYCLEHGIQPDGQISTD 207
E IS+H+GQAG+Q+GNACWELYCLEHGI+PDG + +D
Sbjct: 3 EIISIHIGQAGIQVGNACWELYCLEHGIEPDGTMPSD 39
>03_02_0186 -
6243487-6243799,6243892-6244400,6244495-6244557,
6245482-6245681,6246125-6246519,6246776-6246888
Length = 530
Score = 72.5 bits (170), Expect = 4e-14
Identities = 27/37 (72%), Positives = 33/37 (89%)
Frame = +1
Query: 97 ECISVHVGQAGVQIGNACWELYCLEHGIQPDGQISTD 207
E IS+H+GQAG+Q+GN+CWELYCLEHGIQPDG + D
Sbjct: 3 EIISIHIGQAGIQVGNSCWELYCLEHGIQPDGLMPRD 39
>05_01_0412 -
3248405-3248458,3248533-3248637,3248950-3249078,
3249279-3249353,3249520-3249624,3249714-3249767,
3249970-3250370,3250583-3250694,3250886-3251086,
3251844-3251972
Length = 454
Score = 41.9 bits (94), Expect = 7e-05
Identities = 18/32 (56%), Positives = 21/32 (65%)
Frame = +1
Query: 97 ECISVHVGQAGVQIGNACWELYCLEHGIQPDG 192
E I++ VGQ G QIG W+ CLEHGI DG
Sbjct: 4 EIITIQVGQCGNQIGMEFWKQLCLEHGIGKDG 35
>05_04_0306 +
20058640-20059159,20060406-20060819,20060921-20061190,
20062179-20062849
Length = 624
Score = 40.3 bits (90), Expect = 2e-04
Identities = 17/36 (47%), Positives = 22/36 (61%)
Frame = +1
Query: 88 KCVECISVHVGQAGVQIGNACWELYCLEHGIQPDGQ 195
K E + + GQ G QIG+ WE+ C EHGI P G+
Sbjct: 180 KMREILHIQGGQCGNQIGSKFWEVVCDEHGIDPTGR 215
>01_02_0004 - 10097759-10098438,10098973-10099242,10099956-10100349
Length = 447
Score = 39.9 bits (89), Expect = 3e-04
Identities = 16/33 (48%), Positives = 21/33 (63%)
Frame = +1
Query: 97 ECISVHVGQAGVQIGNACWELYCLEHGIQPDGQ 195
E + + GQ G QIG+ WE+ C EHGI P G+
Sbjct: 3 EILHIQGGQCGNQIGSKFWEVVCDEHGIDPTGR 35
>01_06_1060 +
34162161-34162554,34162613-34162675,34163262-34163531,
34163944-34164623
Length = 468
Score = 38.7 bits (86), Expect = 6e-04
Identities = 16/33 (48%), Positives = 20/33 (60%)
Frame = +1
Query: 97 ECISVHVGQAGVQIGNACWELYCLEHGIQPDGQ 195
E + + GQ G QIG WE+ C EHGI P G+
Sbjct: 3 EILHIQGGQCGNQIGAKFWEVVCDEHGIDPTGR 35
>06_03_1086 - 27494238-27494914,27495471-27495740,27495986-27496379
Length = 446
Score = 37.9 bits (84), Expect = 0.001
Identities = 17/37 (45%), Positives = 21/37 (56%)
Frame = +1
Query: 97 ECISVHVGQAGVQIGNACWELYCLEHGIQPDGQISTD 207
E + + GQ G QIG WE+ C EHGI G+ S D
Sbjct: 3 EILHIQGGQCGNQIGAKFWEVICDEHGIDHTGKYSGD 39
>03_05_0575 +
25747813-25748206,25748567-25748614,25750296-25750565,
25750658-25751334
Length = 462
Score = 37.9 bits (84), Expect = 0.001
Identities = 15/32 (46%), Positives = 19/32 (59%)
Frame = +1
Query: 97 ECISVHVGQAGVQIGNACWELYCLEHGIQPDG 192
E + + GQ G QIG WE+ C EHG+ P G
Sbjct: 3 EILHIQGGQCGNQIGAKFWEVICGEHGVDPTG 34
>03_01_0034 + 318432-318825,318902-319851
Length = 447
Score = 37.9 bits (84), Expect = 0.001
Identities = 16/37 (43%), Positives = 20/37 (54%)
Frame = +1
Query: 97 ECISVHVGQAGVQIGNACWELYCLEHGIQPDGQISTD 207
E + + GQ G QIG WE+ C EHGI G+ D
Sbjct: 3 EILHIQGGQCGNQIGAKFWEVVCAEHGIDATGRYDGD 39
>02_01_0499 + 3619909-3620302,3621123-3621392,3621788-3622467
Length = 447
Score = 37.9 bits (84), Expect = 0.001
Identities = 17/37 (45%), Positives = 21/37 (56%)
Frame = +1
Query: 97 ECISVHVGQAGVQIGNACWELYCLEHGIQPDGQISTD 207
E + + GQ G QIG WE+ C EHGI G+ S D
Sbjct: 3 EILHIQGGQCGNQIGAKFWEVICDEHGIDHTGKYSGD 39
>03_06_0176 + 32158462-32158855,32159960-32160229,32160328-32160998
Length = 444
Score = 36.7 bits (81), Expect = 0.003
Identities = 15/37 (40%), Positives = 21/37 (56%)
Frame = +1
Query: 97 ECISVHVGQAGVQIGNACWELYCLEHGIQPDGQISTD 207
E + + GQ G QIG WE+ C EHG+ G+ + D
Sbjct: 3 EILHIQGGQCGNQIGAKFWEVICDEHGVDATGRYAGD 39
>09_06_0269 -
21947847-21947904,21947988-21948169,21948268-21948963,
21949378-21950021,21950441-21950543,21950618-21950812,
21951308-21951931
Length = 833
Score = 27.5 bits (58), Expect = 1.6
Identities = 10/36 (27%), Positives = 23/36 (63%)
Frame = +2
Query: 77 NSIQNALSASLYTLAKPESRSEMPAGSCIALSTASN 184
++++NA+ ++YT+ + ESR +P I +A++
Sbjct: 540 HNLENAVDKTVYTITQSESRYHLPGSKFIKNQSATS 575
>08_02_1414 +
26901937-26902597,26903361-26903397,26903733-26903791,
26904198-26904388,26904591-26904680,26904833-26904926,
26905008-26905159,26905250-26905347,26905400-26905459,
26905460-26905598,26905686-26905784,26905883-26906018,
26906352-26906413
Length = 625
Score = 26.6 bits (56), Expect = 2.7
Identities = 7/13 (53%), Positives = 10/13 (76%)
Frame = +1
Query: 142 NACWELYCLEHGI 180
N CW+L C+EH +
Sbjct: 467 NLCWKLICMEHAV 479
>03_05_1078 +
30205876-30206346,30206624-30207001,30207967-30208092,
30209569-30209805
Length = 403
Score = 25.8 bits (54), Expect = 4.8
Identities = 10/27 (37%), Positives = 16/27 (59%)
Frame = +1
Query: 112 HVGQAGVQIGNACWELYCLEHGIQPDG 192
H G V++ AC+ L L++G + DG
Sbjct: 373 HEGDGSVEVDEACFYLMGLDYGPKRDG 399
>01_05_0685 +
24273331-24273569,24275429-24275465,24275739-24275808,
24275978-24276082,24276205-24276355,24276454-24276536,
24276619-24276712,24276796-24276883
Length = 288
Score = 25.8 bits (54), Expect = 4.8
Identities = 11/20 (55%), Positives = 13/20 (65%)
Frame = -1
Query: 209 LSVEI*PSGWMPCSRQYSSQ 150
LS I SGW+PCSR S+
Sbjct: 187 LSAVIGLSGWLPCSRTLKSK 206
>01_01_0524 -
3845637-3845727,3845803-3845896,3846415-3846497,
3846587-3846737,3847113-3847217,3847351-3847420,
3847551-3847587,3848155-3848257,3848441-3848480
Length = 257
Score = 25.8 bits (54), Expect = 4.8
Identities = 9/20 (45%), Positives = 14/20 (70%)
Frame = -1
Query: 209 LSVEI*PSGWMPCSRQYSSQ 150
LSV + SGW+PC+R ++
Sbjct: 155 LSVSVGLSGWLPCARSLKNK 174
>07_03_0741 -
21107566-21107838,21107964-21108102,21108189-21108426,
21108629-21108836,21108945-21109066,21109146-21109271,
21109356-21109774,21109844-21110268
Length = 649
Score = 25.4 bits (53), Expect = 6.3
Identities = 9/15 (60%), Positives = 11/15 (73%)
Frame = -3
Query: 153 PAGISDLDSGLANVY 109
PAGI+D D G+ N Y
Sbjct: 21 PAGIADCDEGVGNTY 35
>04_01_0383 +
5085697-5085724,5085816-5085927,5087249-5087285,
5087512-5087581,5087704-5087808,5088022-5088172,
5088257-5088339,5089152-5089372,5089465-5089501,
5089668-5089753
Length = 309
Score = 25.4 bits (53), Expect = 6.3
Identities = 11/20 (55%), Positives = 13/20 (65%)
Frame = -1
Query: 209 LSVEI*PSGWMPCSRQYSSQ 150
LS I SGW+PCSR S+
Sbjct: 154 LSAVISLSGWLPCSRTLRSK 173
>02_01_0108 - 789597-790224,790441-790570,790946-791081
Length = 297
Score = 25.4 bits (53), Expect = 6.3
Identities = 9/25 (36%), Positives = 13/25 (52%)
Frame = -1
Query: 182 WMPCSRQYSSQQAFPIWTPAWPTCT 108
WMP S + Q+++ I WP T
Sbjct: 207 WMPMSAAAAGQESYSISAQHWPAST 231
>09_06_0115 + 20944586-20945185
Length = 199
Score = 25.0 bits (52), Expect = 8.4
Identities = 10/21 (47%), Positives = 13/21 (61%)
Frame = +3
Query: 120 PSRSPDRKCLLGAVLP*ARHP 182
PS + D+ CL G+ LP HP
Sbjct: 12 PSSTSDKGCLAGSPLPRPPHP 32
>02_03_0229 + 16617371-16617970
Length = 199
Score = 25.0 bits (52), Expect = 8.4
Identities = 10/21 (47%), Positives = 13/21 (61%)
Frame = +3
Query: 120 PSRSPDRKCLLGAVLP*ARHP 182
PS + D+ CL G+ LP HP
Sbjct: 12 PSSTSDKGCLAGSPLPRPPHP 32
Database: rice
Posted date: Oct 4, 2007 10:57 AM
Number of letters in database: 14,793,348
Number of sequences in database: 37,544
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 5,149,812
Number of Sequences: 37544
Number of extensions: 78627
Number of successful extensions: 242
Number of sequences better than 10.0: 23
Number of HSP's better than 10.0 without gapping: 241
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 242
length of database: 14,793,348
effective HSP length: 49
effective length of database: 12,953,692
effective search space used: 259073840
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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