Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= S06A01NCLL0023_L06
(209 letters)
Database: celegans
27,780 sequences; 12,740,198 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
U65429-1|AAB48241.1| 450|Caenorhabditis elegans alpha-tubulin M... 78 7e-16
D21134-1|BAA22203.1| 449|Caenorhabditis elegans alpha-3 tubulin... 78 7e-16
AF003387-1|AAB54263.2| 450|Caenorhabditis elegans Mechanosensor... 78 7e-16
AB017190-1|BAA32600.1| 450|Caenorhabditis elegans Alpha tubulin... 78 7e-16
U40420-4|AAA81432.2| 456|Caenorhabditis elegans Tubulin, alpha ... 77 2e-15
Z81070-8|CAB03001.1| 449|Caenorhabditis elegans Hypothetical pr... 76 3e-15
D16439-1|BAA03909.1| 449|Caenorhabditis elegans alpha-1 tubulin... 76 3e-15
Z99709-10|CAB16856.1| 448|Caenorhabditis elegans Hypothetical p... 75 5e-15
D14965-1|BAA03610.1| 448|Caenorhabditis elegans alpha-2 tubulin... 75 5e-15
Z37092-12|CAA85463.1| 448|Caenorhabditis elegans Hypothetical p... 75 9e-15
AL023832-2|CAA19476.1| 448|Caenorhabditis elegans Hypothetical ... 75 9e-15
Z81523-9|CAB04246.2| 464|Caenorhabditis elegans Hypothetical pr... 72 5e-14
Z78062-1|CAB01495.1| 447|Caenorhabditis elegans Hypothetical pr... 72 6e-14
Z81134-1|CAB03447.1| 444|Caenorhabditis elegans Hypothetical pr... 71 1e-13
Z37140-7|CAA85497.2| 452|Caenorhabditis elegans Hypothetical pr... 65 6e-12
Z92803-10|CAB07246.1| 449|Caenorhabditis elegans Hypothetical p... 42 5e-05
Z35597-5|CAA84648.1| 450|Caenorhabditis elegans Hypothetical pr... 42 5e-05
Z77131-2|CAB00853.4| 444|Caenorhabditis elegans Hypothetical pr... 41 1e-04
Z78200-11|CAB01587.2| 426|Caenorhabditis elegans Hypothetical p... 40 2e-04
Z78198-13|CAB01575.2| 426|Caenorhabditis elegans Hypothetical p... 40 2e-04
X15242-1|CAA33320.1| 441|Caenorhabditis elegans beta-tubulin pr... 40 2e-04
U70844-1|AAB09092.1| 441|Caenorhabditis elegans Mechanosensory ... 40 2e-04
Z46240-1|CAA86310.1| 444|Caenorhabditis elegans Hypothetical pr... 37 0.002
Z22179-11|CAA80164.1| 444|Caenorhabditis elegans Hypothetical p... 35 0.009
AF287259-1|AAG24513.1| 444|Caenorhabditis elegans gamma-tubulin... 35 0.009
AB017191-1|BAA32601.1| 435|Caenorhabditis elegans alpha tubulin... 30 0.20
AF067950-6|AAG24156.2| 372|Caenorhabditis elegans Serpentine re... 29 0.34
U80028-6|AAQ01536.1| 365|Caenorhabditis elegans Serpentine rece... 28 1.0
Z81119-3|CAB03334.1| 550|Caenorhabditis elegans Hypothetical pr... 26 3.2
Z93392-1|CAB07687.2| 1737|Caenorhabditis elegans Hypothetical pr... 25 7.3
Z83219-9|CAB05699.2| 1737|Caenorhabditis elegans Hypothetical pr... 25 7.3
Z48009-5|CAA88086.1| 329|Caenorhabditis elegans Hypothetical pr... 25 7.3
U80455-4|AAY55873.2| 315|Caenorhabditis elegans Hypothetical pr... 25 7.3
AL032648-9|CAB54460.1| 1737|Caenorhabditis elegans Hypothetical ... 25 7.3
AF003389-10|AAC71135.2| 289|Caenorhabditis elegans Hypothetical... 25 7.3
Z81546-4|CAB04453.1| 184|Caenorhabditis elegans Hypothetical pr... 25 9.7
U77412-1|AAB63465.1| 1151|Caenorhabditis elegans O-linked GlcNAc... 25 9.7
U21320-2|ABC71824.1| 973|Caenorhabditis elegans O-linked glcnac... 25 9.7
U21320-1|AAA62535.2| 1151|Caenorhabditis elegans O-linked glcnac... 25 9.7
>U65429-1|AAB48241.1| 450|Caenorhabditis elegans alpha-tubulin
MEC-12 protein.
Length = 450
Score = 78.2 bits (184), Expect = 7e-16
Identities = 31/37 (83%), Positives = 35/37 (94%)
Frame = +1
Query: 97 ECISVHVGQAGVQIGNACWELYCLEHGIQPDGQISTD 207
E IS+H+GQAGVQIGNACWELYCLEHGIQPDGQ+ +D
Sbjct: 3 EVISIHIGQAGVQIGNACWELYCLEHGIQPDGQMPSD 39
>D21134-1|BAA22203.1| 449|Caenorhabditis elegans alpha-3 tubulin
protein.
Length = 449
Score = 78.2 bits (184), Expect = 7e-16
Identities = 31/37 (83%), Positives = 35/37 (94%)
Frame = +1
Query: 97 ECISVHVGQAGVQIGNACWELYCLEHGIQPDGQISTD 207
E IS+H+GQAGVQIGNACWELYCLEHGIQPDGQ+ +D
Sbjct: 2 EVISIHIGQAGVQIGNACWELYCLEHGIQPDGQMPSD 38
>AF003387-1|AAB54263.2| 450|Caenorhabditis elegans Mechanosensory
abnormality protein12 protein.
Length = 450
Score = 78.2 bits (184), Expect = 7e-16
Identities = 31/37 (83%), Positives = 35/37 (94%)
Frame = +1
Query: 97 ECISVHVGQAGVQIGNACWELYCLEHGIQPDGQISTD 207
E IS+H+GQAGVQIGNACWELYCLEHGIQPDGQ+ +D
Sbjct: 3 EVISIHIGQAGVQIGNACWELYCLEHGIQPDGQMPSD 39
>AB017190-1|BAA32600.1| 450|Caenorhabditis elegans Alpha tubulin
(tba-3) protein.
Length = 450
Score = 78.2 bits (184), Expect = 7e-16
Identities = 31/37 (83%), Positives = 35/37 (94%)
Frame = +1
Query: 97 ECISVHVGQAGVQIGNACWELYCLEHGIQPDGQISTD 207
E IS+H+GQAGVQIGNACWELYCLEHGIQPDGQ+ +D
Sbjct: 3 EVISIHIGQAGVQIGNACWELYCLEHGIQPDGQMPSD 39
>U40420-4|AAA81432.2| 456|Caenorhabditis elegans Tubulin, alpha
protein 9 protein.
Length = 456
Score = 77.0 bits (181), Expect = 2e-15
Identities = 31/43 (72%), Positives = 37/43 (86%)
Frame = +1
Query: 79 LNTKCVECISVHVGQAGVQIGNACWELYCLEHGIQPDGQISTD 207
+N + E IS+HVGQAGVQ+GNACWELYCLEHGIQPDG I+ +
Sbjct: 2 VNNRSREVISIHVGQAGVQMGNACWELYCLEHGIQPDGMINEE 44
>Z81070-8|CAB03001.1| 449|Caenorhabditis elegans Hypothetical
protein F26E4.8 protein.
Length = 449
Score = 76.2 bits (179), Expect = 3e-15
Identities = 31/37 (83%), Positives = 34/37 (91%)
Frame = +1
Query: 97 ECISVHVGQAGVQIGNACWELYCLEHGIQPDGQISTD 207
E IS+HVGQAGVQIGNACWELYCLEHGIQPDG + +D
Sbjct: 3 EVISIHVGQAGVQIGNACWELYCLEHGIQPDGTMPSD 39
>D16439-1|BAA03909.1| 449|Caenorhabditis elegans alpha-1 tubulin
protein.
Length = 449
Score = 76.2 bits (179), Expect = 3e-15
Identities = 31/37 (83%), Positives = 34/37 (91%)
Frame = +1
Query: 97 ECISVHVGQAGVQIGNACWELYCLEHGIQPDGQISTD 207
E IS+HVGQAGVQIGNACWELYCLEHGIQPDG + +D
Sbjct: 3 EVISIHVGQAGVQIGNACWELYCLEHGIQPDGTMPSD 39
>Z99709-10|CAB16856.1| 448|Caenorhabditis elegans Hypothetical
protein C47B2.3 protein.
Length = 448
Score = 75.4 bits (177), Expect = 5e-15
Identities = 31/36 (86%), Positives = 33/36 (91%)
Frame = +1
Query: 97 ECISVHVGQAGVQIGNACWELYCLEHGIQPDGQIST 204
E IS+HVGQAGVQIGNACWELYCLEHGIQPDG + T
Sbjct: 3 EVISIHVGQAGVQIGNACWELYCLEHGIQPDGTMPT 38
>D14965-1|BAA03610.1| 448|Caenorhabditis elegans alpha-2 tubulin
protein.
Length = 448
Score = 75.4 bits (177), Expect = 5e-15
Identities = 31/36 (86%), Positives = 33/36 (91%)
Frame = +1
Query: 97 ECISVHVGQAGVQIGNACWELYCLEHGIQPDGQIST 204
E IS+HVGQAGVQIGNACWELYCLEHGIQPDG + T
Sbjct: 3 EVISIHVGQAGVQIGNACWELYCLEHGIQPDGTMPT 38
>Z37092-12|CAA85463.1| 448|Caenorhabditis elegans Hypothetical
protein F44F4.11 protein.
Length = 448
Score = 74.5 bits (175), Expect = 9e-15
Identities = 30/37 (81%), Positives = 34/37 (91%)
Frame = +1
Query: 97 ECISVHVGQAGVQIGNACWELYCLEHGIQPDGQISTD 207
E IS+HVGQAGVQIGNACWELYCLEHGIQPDG + ++
Sbjct: 3 EVISIHVGQAGVQIGNACWELYCLEHGIQPDGTMPSE 39
>AL023832-2|CAA19476.1| 448|Caenorhabditis elegans Hypothetical
protein F44F4.11 protein.
Length = 448
Score = 74.5 bits (175), Expect = 9e-15
Identities = 30/37 (81%), Positives = 34/37 (91%)
Frame = +1
Query: 97 ECISVHVGQAGVQIGNACWELYCLEHGIQPDGQISTD 207
E IS+HVGQAGVQIGNACWELYCLEHGIQPDG + ++
Sbjct: 3 EVISIHVGQAGVQIGNACWELYCLEHGIQPDGTMPSE 39
>Z81523-9|CAB04246.2| 464|Caenorhabditis elegans Hypothetical
protein F32H2.9 protein.
Length = 464
Score = 72.1 bits (169), Expect = 5e-14
Identities = 29/32 (90%), Positives = 31/32 (96%)
Frame = +1
Query: 97 ECISVHVGQAGVQIGNACWELYCLEHGIQPDG 192
E IS+HVGQAGVQIGNACWEL+CLEHGIQPDG
Sbjct: 9 EVISIHVGQAGVQIGNACWELFCLEHGIQPDG 40
>Z78062-1|CAB01495.1| 447|Caenorhabditis elegans Hypothetical
protein F16D3.1 protein.
Length = 447
Score = 71.7 bits (168), Expect = 6e-14
Identities = 28/37 (75%), Positives = 32/37 (86%)
Frame = +1
Query: 97 ECISVHVGQAGVQIGNACWELYCLEHGIQPDGQISTD 207
E +S+H+GQAGVQIGNACWELYCLEHGI PDG + D
Sbjct: 3 EIVSIHIGQAGVQIGNACWELYCLEHGITPDGLMPDD 39
>Z81134-1|CAB03447.1| 444|Caenorhabditis elegans Hypothetical
protein T28D6.2 protein.
Length = 444
Score = 70.9 bits (166), Expect = 1e-13
Identities = 29/32 (90%), Positives = 30/32 (93%)
Frame = +1
Query: 97 ECISVHVGQAGVQIGNACWELYCLEHGIQPDG 192
E IS+HVGQAGVQIGNACWELYCLEHGI PDG
Sbjct: 3 EVISIHVGQAGVQIGNACWELYCLEHGILPDG 34
>Z37140-7|CAA85497.2| 452|Caenorhabditis elegans Hypothetical
protein ZK899.4 protein.
Length = 452
Score = 65.3 bits (152), Expect = 6e-12
Identities = 23/32 (71%), Positives = 28/32 (87%)
Frame = +1
Query: 97 ECISVHVGQAGVQIGNACWELYCLEHGIQPDG 192
EC+S+H+GQAG QIGNACWELYC+EHG+ G
Sbjct: 7 ECVSIHIGQAGAQIGNACWELYCIEHGLDEAG 38
>Z92803-10|CAB07246.1| 449|Caenorhabditis elegans Hypothetical
protein K01G5.7 protein.
Length = 449
Score = 42.3 bits (95), Expect = 5e-05
Identities = 18/32 (56%), Positives = 21/32 (65%)
Frame = +1
Query: 97 ECISVHVGQAGVQIGNACWELYCLEHGIQPDG 192
E + V GQ G QIG+ WE+ EHGIQPDG
Sbjct: 3 EIVHVQAGQCGNQIGSKFWEVISDEHGIQPDG 34
>Z35597-5|CAA84648.1| 450|Caenorhabditis elegans Hypothetical
protein C36E8.5 protein.
Length = 450
Score = 42.3 bits (95), Expect = 5e-05
Identities = 18/32 (56%), Positives = 21/32 (65%)
Frame = +1
Query: 97 ECISVHVGQAGVQIGNACWELYCLEHGIQPDG 192
E + V GQ G QIG+ WE+ EHGIQPDG
Sbjct: 3 EIVHVQAGQCGNQIGSKFWEVISDEHGIQPDG 34
>Z77131-2|CAB00853.4| 444|Caenorhabditis elegans Hypothetical
protein C54C6.2 protein.
Length = 444
Score = 41.1 bits (92), Expect = 1e-04
Identities = 18/32 (56%), Positives = 20/32 (62%)
Frame = +1
Query: 97 ECISVHVGQAGVQIGNACWELYCLEHGIQPDG 192
E + V GQ G QIG WE+ EHGIQPDG
Sbjct: 3 EIVHVQAGQCGNQIGAKFWEVISDEHGIQPDG 34
>Z78200-11|CAB01587.2| 426|Caenorhabditis elegans Hypothetical
protein T04H1.9 protein.
Length = 426
Score = 40.3 bits (90), Expect = 2e-04
Identities = 19/37 (51%), Positives = 21/37 (56%)
Frame = +1
Query: 97 ECISVHVGQAGVQIGNACWELYCLEHGIQPDGQISTD 207
E I+V VGQ G QIG WE EHG+Q DG D
Sbjct: 3 EIINVQVGQCGNQIGAKFWEYISEEHGLQTDGTYKGD 39
>Z78198-13|CAB01575.2| 426|Caenorhabditis elegans Hypothetical
protein T04H1.9 protein.
Length = 426
Score = 40.3 bits (90), Expect = 2e-04
Identities = 19/37 (51%), Positives = 21/37 (56%)
Frame = +1
Query: 97 ECISVHVGQAGVQIGNACWELYCLEHGIQPDGQISTD 207
E I+V VGQ G QIG WE EHG+Q DG D
Sbjct: 3 EIINVQVGQCGNQIGAKFWEYISEEHGLQTDGTYKGD 39
>X15242-1|CAA33320.1| 441|Caenorhabditis elegans beta-tubulin
protein.
Length = 441
Score = 39.9 bits (89), Expect = 2e-04
Identities = 17/37 (45%), Positives = 21/37 (56%)
Frame = +1
Query: 97 ECISVHVGQAGVQIGNACWELYCLEHGIQPDGQISTD 207
E + + GQ G QIG+ WE+ EHGI P GQ D
Sbjct: 3 EIVHIQAGQCGNQIGSKFWEVISDEHGIDPSGQYVGD 39
>U70844-1|AAB09092.1| 441|Caenorhabditis elegans Mechanosensory
abnormality protein7 protein.
Length = 441
Score = 39.9 bits (89), Expect = 2e-04
Identities = 17/37 (45%), Positives = 21/37 (56%)
Frame = +1
Query: 97 ECISVHVGQAGVQIGNACWELYCLEHGIQPDGQISTD 207
E + + GQ G QIG+ WE+ EHGI P GQ D
Sbjct: 3 EIVHIQAGQCGNQIGSKFWEVISDEHGIDPSGQYVGD 39
>Z46240-1|CAA86310.1| 444|Caenorhabditis elegans Hypothetical
protein B0272.1 protein.
Length = 444
Score = 37.1 bits (82), Expect = 0.002
Identities = 16/37 (43%), Positives = 20/37 (54%)
Frame = +1
Query: 97 ECISVHVGQAGVQIGNACWELYCLEHGIQPDGQISTD 207
E + + GQ G QIG WE+ EHGI P G + D
Sbjct: 3 EIVHIQAGQCGNQIGAKFWEVISDEHGIDPTGAYNGD 39
>Z22179-11|CAA80164.1| 444|Caenorhabditis elegans Hypothetical
protein F58A4.8 protein.
Length = 444
Score = 34.7 bits (76), Expect = 0.009
Identities = 15/31 (48%), Positives = 19/31 (61%)
Frame = +1
Query: 103 ISVHVGQAGVQIGNACWELYCLEHGIQPDGQ 195
++VHVGQ G Q+ A W+ EHGI GQ
Sbjct: 8 MTVHVGQCGNQLAQAFWKSMVDEHGINERGQ 38
>AF287259-1|AAG24513.1| 444|Caenorhabditis elegans gamma-tubulin
protein.
Length = 444
Score = 34.7 bits (76), Expect = 0.009
Identities = 15/31 (48%), Positives = 19/31 (61%)
Frame = +1
Query: 103 ISVHVGQAGVQIGNACWELYCLEHGIQPDGQ 195
++VHVGQ G Q+ A W+ EHGI GQ
Sbjct: 8 MTVHVGQCGNQLAQAFWKSMVDEHGINERGQ 38
>AB017191-1|BAA32601.1| 435|Caenorhabditis elegans alpha tubulin
(tba-6) protein.
Length = 435
Score = 30.3 bits (65), Expect = 0.20
Identities = 10/12 (83%), Positives = 12/12 (100%)
Frame = +1
Query: 157 LYCLEHGIQPDG 192
++CLEHGIQPDG
Sbjct: 1 MFCLEHGIQPDG 12
>AF067950-6|AAG24156.2| 372|Caenorhabditis elegans Serpentine
receptor, class w protein122 protein.
Length = 372
Score = 29.5 bits (63), Expect = 0.34
Identities = 20/53 (37%), Positives = 29/53 (54%)
Frame = +2
Query: 44 LIYFIYTLRSXNSIQNALSASLYTLAKPESRSEMPAGSCIALSTASNLMVRFL 202
LI+FI +R+ IQN LS+ L KP++ + G C+A S M +FL
Sbjct: 132 LIFFIAFIRTL-IIQNPLSSKYEALGKPKASIIVITGICVATFPIS--MFKFL 181
>U80028-6|AAQ01536.1| 365|Caenorhabditis elegans Serpentine
receptor, class w protein123 protein.
Length = 365
Score = 27.9 bits (59), Expect = 1.0
Identities = 19/53 (35%), Positives = 28/53 (52%)
Frame = +2
Query: 44 LIYFIYTLRSXNSIQNALSASLYTLAKPESRSEMPAGSCIALSTASNLMVRFL 202
LI+FI +R+ IQN LS+ L KP++ + G C+ S M +FL
Sbjct: 132 LIFFIAFIRTL-IIQNPLSSKYEALGKPKASIIVITGICVVTLPIS--MFKFL 181
>Z81119-3|CAB03334.1| 550|Caenorhabditis elegans Hypothetical
protein T10H4.4 protein.
Length = 550
Score = 26.2 bits (55), Expect = 3.2
Identities = 13/38 (34%), Positives = 18/38 (47%)
Frame = -1
Query: 122 WPTCTEMHSTHFVLSFXNVKCR*NKLISRRSARPVKRL 9
W ++THFV+ NVK + + SRR RL
Sbjct: 138 WNNNMAQNNTHFVIFATNVKTKTKRTFSRRFNEKTFRL 175
>Z93392-1|CAB07687.2| 1737|Caenorhabditis elegans Hypothetical
protein Y48E1A.1a protein.
Length = 1737
Score = 25.0 bits (52), Expect = 7.3
Identities = 13/48 (27%), Positives = 19/48 (39%)
Frame = +1
Query: 40 LINLFYLHFTFXKLNTKCVECISVHVGQAGVQIGNACWELYCLEHGIQ 183
+ N FT+ L CV C + GV +L C E G++
Sbjct: 90 VFNPLLFQFTYNLLKGSCVHCHRLTCKGDGVNARMLLAQLRCFELGVE 137
>Z83219-9|CAB05699.2| 1737|Caenorhabditis elegans Hypothetical
protein Y48E1A.1a protein.
Length = 1737
Score = 25.0 bits (52), Expect = 7.3
Identities = 13/48 (27%), Positives = 19/48 (39%)
Frame = +1
Query: 40 LINLFYLHFTFXKLNTKCVECISVHVGQAGVQIGNACWELYCLEHGIQ 183
+ N FT+ L CV C + GV +L C E G++
Sbjct: 90 VFNPLLFQFTYNLLKGSCVHCHRLTCKGDGVNARMLLAQLRCFELGVE 137
>Z48009-5|CAA88086.1| 329|Caenorhabditis elegans Hypothetical
protein AH6.7 protein.
Length = 329
Score = 25.0 bits (52), Expect = 7.3
Identities = 8/18 (44%), Positives = 12/18 (66%)
Frame = +3
Query: 108 CTRWPSRSPDRKCLLGAV 161
CT WPS+S DR + ++
Sbjct: 175 CTSWPSKSRDRSTMFFSI 192
>U80455-4|AAY55873.2| 315|Caenorhabditis elegans Hypothetical
protein T01D1.7 protein.
Length = 315
Score = 25.0 bits (52), Expect = 7.3
Identities = 8/22 (36%), Positives = 14/22 (63%)
Frame = +2
Query: 47 IYFIYTLRSXNSIQNALSASLY 112
+Y+ YTL + N +N +S +Y
Sbjct: 50 VYYCYTLTTYNIFKNTMSGPIY 71
>AL032648-9|CAB54460.1| 1737|Caenorhabditis elegans Hypothetical
protein Y48E1A.1a protein.
Length = 1737
Score = 25.0 bits (52), Expect = 7.3
Identities = 13/48 (27%), Positives = 19/48 (39%)
Frame = +1
Query: 40 LINLFYLHFTFXKLNTKCVECISVHVGQAGVQIGNACWELYCLEHGIQ 183
+ N FT+ L CV C + GV +L C E G++
Sbjct: 90 VFNPLLFQFTYNLLKGSCVHCHRLTCKGDGVNARMLLAQLRCFELGVE 137
>AF003389-10|AAC71135.2| 289|Caenorhabditis elegans Hypothetical
protein F23H11.7 protein.
Length = 289
Score = 25.0 bits (52), Expect = 7.3
Identities = 10/15 (66%), Positives = 11/15 (73%)
Frame = +2
Query: 110 YTLAKPESRSEMPAG 154
Y + PESRSE PAG
Sbjct: 30 YQVCAPESRSECPAG 44
>Z81546-4|CAB04453.1| 184|Caenorhabditis elegans Hypothetical
protein F53A2.5 protein.
Length = 184
Score = 24.6 bits (51), Expect = 9.7
Identities = 9/16 (56%), Positives = 12/16 (75%)
Frame = -3
Query: 123 LANVYRDALNAFCIEF 76
+AN RD +NA C+EF
Sbjct: 40 IANESRDMINACCVEF 55
>U77412-1|AAB63465.1| 1151|Caenorhabditis elegans O-linked GlcNAc
transferase protein.
Length = 1151
Score = 24.6 bits (51), Expect = 9.7
Identities = 10/25 (40%), Positives = 17/25 (68%)
Frame = -3
Query: 168 KAIQLPAGISDLDSGLANVYRDALN 94
+AIQ+ +D S LA++++DA N
Sbjct: 524 RAIQINPAFADAHSNLASIHKDAGN 548
>U21320-2|ABC71824.1| 973|Caenorhabditis elegans O-linked glcnac
transferase protein1, isoform b protein.
Length = 973
Score = 24.6 bits (51), Expect = 9.7
Identities = 10/25 (40%), Positives = 17/25 (68%)
Frame = -3
Query: 168 KAIQLPAGISDLDSGLANVYRDALN 94
+AIQ+ +D S LA++++DA N
Sbjct: 346 RAIQINPAFADAHSNLASIHKDAGN 370
>U21320-1|AAA62535.2| 1151|Caenorhabditis elegans O-linked glcnac
transferase protein1, isoform a protein.
Length = 1151
Score = 24.6 bits (51), Expect = 9.7
Identities = 10/25 (40%), Positives = 17/25 (68%)
Frame = -3
Query: 168 KAIQLPAGISDLDSGLANVYRDALN 94
+AIQ+ +D S LA++++DA N
Sbjct: 524 RAIQINPAFADAHSNLASIHKDAGN 548
Database: celegans
Posted date: Oct 23, 2007 1:18 PM
Number of letters in database: 12,740,198
Number of sequences in database: 27,780
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 4,379,175
Number of Sequences: 27780
Number of extensions: 67239
Number of successful extensions: 280
Number of sequences better than 10.0: 39
Number of HSP's better than 10.0 without gapping: 273
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 280
length of database: 12,740,198
effective HSP length: 49
effective length of database: 11,378,978
effective search space used: 227579560
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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