Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= S06A01NCLL0023_L06
(209 letters)
Database: bee
438 sequences; 146,343 total letters
Searching......................................................done
Score E
Sequences producing significant alignments: (bits) Value
DQ869053-1|ABJ09600.1| 459|Apis mellifera capa-like receptor pr... 21 1.6
EF625897-1|ABR45904.1| 684|Apis mellifera hexamerin protein. 21 2.1
EF591128-1|ABQ59246.1| 684|Apis mellifera hexamerin 70a protein. 21 2.1
EF625896-1|ABR45903.1| 683|Apis mellifera hexamerin protein. 20 2.8
AY601637-1|AAT11850.1| 683|Apis mellifera hexamerin 70b protein. 20 2.8
DQ026039-1|AAY87898.1| 427|Apis mellifera nicotinic acetylcholi... 20 3.7
AY395073-1|AAQ96729.1| 203|Apis mellifera GABA neurotransmitter... 20 3.7
Y13429-1|CAA73841.1| 402|Apis mellifera dopamine receptor, D1 p... 19 4.9
DQ026036-1|AAY87895.1| 529|Apis mellifera nicotinic acetylcholi... 19 8.5
DQ026035-1|AAY87894.1| 529|Apis mellifera nicotinic acetylcholi... 19 8.5
DQ011227-1|AAY63896.1| 484|Apis mellifera Amt-1-like protein pr... 19 8.5
AY661557-1|AAT74557.1| 411|Apis mellifera yellow-f-like protein... 19 8.5
>DQ869053-1|ABJ09600.1| 459|Apis mellifera capa-like receptor
protein.
Length = 459
Score = 21.0 bits (42), Expect = 1.6
Identities = 7/10 (70%), Positives = 9/10 (90%)
Frame = -2
Query: 154 PSRHFRSGLR 125
P RH+RSGL+
Sbjct: 139 PLRHYRSGLK 148
>EF625897-1|ABR45904.1| 684|Apis mellifera hexamerin protein.
Length = 684
Score = 20.6 bits (41), Expect = 2.1
Identities = 6/10 (60%), Positives = 8/10 (80%)
Frame = -1
Query: 152 QQAFPIWTPA 123
+QAFP W P+
Sbjct: 237 RQAFPFWLPS 246
>EF591128-1|ABQ59246.1| 684|Apis mellifera hexamerin 70a protein.
Length = 684
Score = 20.6 bits (41), Expect = 2.1
Identities = 6/10 (60%), Positives = 8/10 (80%)
Frame = -1
Query: 152 QQAFPIWTPA 123
+QAFP W P+
Sbjct: 237 RQAFPFWLPS 246
>EF625896-1|ABR45903.1| 683|Apis mellifera hexamerin protein.
Length = 683
Score = 20.2 bits (40), Expect = 2.8
Identities = 7/13 (53%), Positives = 10/13 (76%)
Frame = +1
Query: 166 LEHGIQPDGQIST 204
L+HG+ P GQ+ T
Sbjct: 84 LKHGMLPRGQVFT 96
>AY601637-1|AAT11850.1| 683|Apis mellifera hexamerin 70b protein.
Length = 683
Score = 20.2 bits (40), Expect = 2.8
Identities = 7/13 (53%), Positives = 10/13 (76%)
Frame = +1
Query: 166 LEHGIQPDGQIST 204
L+HG+ P GQ+ T
Sbjct: 84 LKHGMLPRGQVFT 96
>DQ026039-1|AAY87898.1| 427|Apis mellifera nicotinic acetylcholine
receptor beta2subunit protein.
Length = 427
Score = 19.8 bits (39), Expect = 3.7
Identities = 8/20 (40%), Positives = 12/20 (60%)
Frame = +2
Query: 140 EMPAGSCIALSTASNLMVRF 199
EMP+ CI ++ + L V F
Sbjct: 133 EMPSVECIVFNSGTILCVPF 152
>AY395073-1|AAQ96729.1| 203|Apis mellifera GABA neurotransmitter
transporter-1A protein.
Length = 203
Score = 19.8 bits (39), Expect = 3.7
Identities = 7/9 (77%), Positives = 8/9 (88%)
Frame = +2
Query: 134 RSEMPAGSC 160
RSE+P GSC
Sbjct: 93 RSELPWGSC 101
>Y13429-1|CAA73841.1| 402|Apis mellifera dopamine receptor, D1
protein.
Length = 402
Score = 19.4 bits (38), Expect = 4.9
Identities = 7/35 (20%), Positives = 17/35 (48%)
Frame = +1
Query: 40 LINLFYLHFTFXKLNTKCVECISVHVGQAGVQIGN 144
L+ +L F + + C++++ + +IGN
Sbjct: 27 LVGFLFLILIFLSVAGNILVCVAIYTDRGLRRIGN 61
Score = 19.0 bits (37), Expect = 6.4
Identities = 9/29 (31%), Positives = 13/29 (44%)
Frame = +1
Query: 10 SLLTGRAERRLINLFYLHFTFXKLNTKCV 96
++ T R RR+ NLF L C+
Sbjct: 49 AIYTDRGLRRIGNLFLASLAIADLFVGCL 77
>DQ026036-1|AAY87895.1| 529|Apis mellifera nicotinic
acetylcholine receptor alpha6subunit protein.
Length = 529
Score = 18.6 bits (36), Expect = 8.5
Identities = 7/11 (63%), Positives = 9/11 (81%)
Frame = +1
Query: 16 LTGRAERRLIN 48
L GR E+RL+N
Sbjct: 50 LCGRHEKRLLN 60
>DQ026035-1|AAY87894.1| 529|Apis mellifera nicotinic
acetylcholine receptor alpha6subunit protein.
Length = 529
Score = 18.6 bits (36), Expect = 8.5
Identities = 7/11 (63%), Positives = 9/11 (81%)
Frame = +1
Query: 16 LTGRAERRLIN 48
L GR E+RL+N
Sbjct: 50 LCGRHEKRLLN 60
>DQ011227-1|AAY63896.1| 484|Apis mellifera Amt-1-like protein
protein.
Length = 484
Score = 18.6 bits (36), Expect = 8.5
Identities = 8/49 (16%), Positives = 20/49 (40%)
Frame = +2
Query: 50 YFIYTLRSXNSIQNALSASLYTLAKPESRSEMPAGSCIALSTASNLMVR 196
YF+ N + + + + ++ M C++L N+M++
Sbjct: 19 YFVSAYNLNQEDSNWIITNSFIIFTMQTGFGMLESGCVSLKNEVNIMMK 67
>AY661557-1|AAT74557.1| 411|Apis mellifera yellow-f-like protein
protein.
Length = 411
Score = 18.6 bits (36), Expect = 8.5
Identities = 7/18 (38%), Positives = 10/18 (55%)
Frame = -1
Query: 122 WPTCTEMHSTHFVLSFXN 69
W T TE++ F+L N
Sbjct: 324 WDTNTELNPNTFILVAEN 341
Database: bee
Posted date: Oct 23, 2007 1:17 PM
Number of letters in database: 146,343
Number of sequences in database: 438
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 50,630
Number of Sequences: 438
Number of extensions: 824
Number of successful extensions: 13
Number of sequences better than 10.0: 12
Number of HSP's better than 10.0 without gapping: 12
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 13
length of database: 146,343
effective HSP length: 45
effective length of database: 126,633
effective search space used: 3039192
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 36 (19.4 bits)
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