Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= S06A01NCLL0023_L04
(125 letters)
Database: celegans
27,780 sequences; 12,740,198 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
U40413-4|AAM51516.1| 699|Caenorhabditis elegans Hypothetical pr... 29 0.60
U40413-3|AAK39176.1| 673|Caenorhabditis elegans Hypothetical pr... 29 0.60
Z83120-9|CAB05589.2| 773|Caenorhabditis elegans Hypothetical pr... 27 1.8
Z81515-11|CAB04199.2| 773|Caenorhabditis elegans Hypothetical p... 27 1.8
AF011893-1|AAC27124.1| 773|Caenorhabditis elegans maternal-effe... 27 1.8
Z81118-4|CAB03327.1| 309|Caenorhabditis elegans Hypothetical pr... 27 2.4
Z81579-4|CAE17915.1| 212|Caenorhabditis elegans Hypothetical pr... 26 3.2
Z66499-4|CAA91301.1| 164|Caenorhabditis elegans Hypothetical pr... 26 3.2
U58760-7|AAK31463.1| 188|Caenorhabditis elegans Hypothetical pr... 26 3.2
U55854-7|AAK68158.1| 166|Caenorhabditis elegans Hypothetical pr... 26 3.2
U55854-6|AAK68161.1| 197|Caenorhabditis elegans Hypothetical pr... 26 3.2
AL032632-5|CAA21585.1| 297|Caenorhabditis elegans Hypothetical ... 26 4.3
Z81498-3|CAB04084.3| 260|Caenorhabditis elegans Hypothetical pr... 25 5.6
Z75952-5|CAB00093.2| 149|Caenorhabditis elegans Hypothetical pr... 25 5.6
EF445112-1|ABQ01579.1| 265|Caenorhabditis elegans scramblase 4 ... 25 5.6
AF039718-3|AAB96744.1| 329|Caenorhabditis elegans Hypothetical ... 25 5.6
AC199170-6|ABO33264.1| 325|Caenorhabditis elegans Hypothetical ... 25 5.6
Z70757-1|CAA94805.1| 497|Caenorhabditis elegans Hypothetical pr... 25 9.8
Z49886-6|CAI79131.1| 149|Caenorhabditis elegans Hypothetical pr... 25 9.8
Z49886-5|CAA90055.1| 152|Caenorhabditis elegans Hypothetical pr... 25 9.8
U40415-10|AAK39254.1| 215|Caenorhabditis elegans Dnaj domain (p... 25 9.8
L41807-1|AAA67369.1| 402|Caenorhabditis elegans fatty acid desa... 25 9.8
AL132951-8|CAC44309.1| 402|Caenorhabditis elegans Hypothetical ... 25 9.8
>U40413-4|AAM51516.1| 699|Caenorhabditis elegans Hypothetical
protein C18B2.5b protein.
Length = 699
Score = 28.7 bits (61), Expect = 0.60
Identities = 10/21 (47%), Positives = 13/21 (61%)
Frame = +2
Query: 38 VHSYTHRHTHVHIPIEMHSQH 100
V SY+H H H H+P + S H
Sbjct: 375 VRSYSHEHDHHHLPPQPKSSH 395
>U40413-3|AAK39176.1| 673|Caenorhabditis elegans Hypothetical
protein C18B2.5a protein.
Length = 673
Score = 28.7 bits (61), Expect = 0.60
Identities = 10/21 (47%), Positives = 13/21 (61%)
Frame = +2
Query: 38 VHSYTHRHTHVHIPIEMHSQH 100
V SY+H H H H+P + S H
Sbjct: 349 VRSYSHEHDHHHLPPQPKSSH 369
>Z83120-9|CAB05589.2| 773|Caenorhabditis elegans Hypothetical
protein R06A4.7 protein.
Length = 773
Score = 27.1 bits (57), Expect = 1.8
Identities = 7/23 (30%), Positives = 13/23 (56%)
Frame = -3
Query: 96 CECISMGICTCVCLCVYECTNKY 28
C C G+C+ +C C C+ ++
Sbjct: 544 CACRENGVCSYMCKCDINCSQRF 566
>Z81515-11|CAB04199.2| 773|Caenorhabditis elegans Hypothetical
protein R06A4.7 protein.
Length = 773
Score = 27.1 bits (57), Expect = 1.8
Identities = 7/23 (30%), Positives = 13/23 (56%)
Frame = -3
Query: 96 CECISMGICTCVCLCVYECTNKY 28
C C G+C+ +C C C+ ++
Sbjct: 544 CACRENGVCSYMCKCDINCSQRF 566
>AF011893-1|AAC27124.1| 773|Caenorhabditis elegans maternal-effect
sterile 2 protein.
Length = 773
Score = 27.1 bits (57), Expect = 1.8
Identities = 7/23 (30%), Positives = 13/23 (56%)
Frame = -3
Query: 96 CECISMGICTCVCLCVYECTNKY 28
C C G+C+ +C C C+ ++
Sbjct: 544 CACRENGVCSYMCKCDINCSQRF 566
>Z81118-4|CAB03327.1| 309|Caenorhabditis elegans Hypothetical
protein T10G3.4 protein.
Length = 309
Score = 26.6 bits (56), Expect = 2.4
Identities = 10/29 (34%), Positives = 17/29 (58%)
Frame = -1
Query: 110 YVFYVASASLWVYVRVCVCVYMNVRINMC 24
++ YV A LWVY+ + CV + + +C
Sbjct: 80 FIDYVDKAYLWVYMYIQPCVVIGLIERLC 108
>Z81579-4|CAE17915.1| 212|Caenorhabditis elegans Hypothetical
protein R13H4.8 protein.
Length = 212
Score = 26.2 bits (55), Expect = 3.2
Identities = 9/23 (39%), Positives = 9/23 (39%)
Frame = -3
Query: 108 CILCCECISMGICTCVCLCVYEC 40
C CC C CT C C C
Sbjct: 97 CRRCCTCCRTCCCTRCCTCCRPC 119
Score = 25.4 bits (53), Expect = 5.6
Identities = 9/23 (39%), Positives = 9/23 (39%)
Frame = -3
Query: 108 CILCCECISMGICTCVCLCVYEC 40
C CC C C C C C C
Sbjct: 109 CTRCCTCCRPCCCGCGCGCGCGC 131
>Z66499-4|CAA91301.1| 164|Caenorhabditis elegans Hypothetical
protein T01B7.8 protein.
Length = 164
Score = 26.2 bits (55), Expect = 3.2
Identities = 9/23 (39%), Positives = 9/23 (39%)
Frame = -3
Query: 108 CILCCECISMGICTCVCLCVYEC 40
C CC C CT C C C
Sbjct: 95 CRRCCTCCRTCCCTRCCTCCRPC 117
Score = 24.6 bits (51), Expect = 9.8
Identities = 8/19 (42%), Positives = 8/19 (42%)
Frame = -3
Query: 108 CILCCECISMGICTCVCLC 52
C CC C C C C C
Sbjct: 107 CTRCCTCCRPCCCGCGCGC 125
>U58760-7|AAK31463.1| 188|Caenorhabditis elegans Hypothetical
protein C27A2.5 protein.
Length = 188
Score = 26.2 bits (55), Expect = 3.2
Identities = 9/23 (39%), Positives = 9/23 (39%)
Frame = -3
Query: 108 CILCCECISMGICTCVCLCVYEC 40
C CC C CT C C C
Sbjct: 96 CRRCCTCCRTCCCTRCCTCCRPC 118
Score = 24.6 bits (51), Expect = 9.8
Identities = 8/19 (42%), Positives = 8/19 (42%)
Frame = -3
Query: 108 CILCCECISMGICTCVCLC 52
C CC C C C C C
Sbjct: 108 CTRCCTCCRPCCCGCGCGC 126
>U55854-7|AAK68158.1| 166|Caenorhabditis elegans Hypothetical
protein C04G6.10 protein.
Length = 166
Score = 26.2 bits (55), Expect = 3.2
Identities = 9/23 (39%), Positives = 9/23 (39%)
Frame = -3
Query: 108 CILCCECISMGICTCVCLCVYEC 40
C CC C CT C C C
Sbjct: 96 CRRCCTCCRTCCCTRCCTCCRPC 118
Score = 24.6 bits (51), Expect = 9.8
Identities = 8/19 (42%), Positives = 8/19 (42%)
Frame = -3
Query: 108 CILCCECISMGICTCVCLC 52
C CC C C C C C
Sbjct: 108 CTRCCTCCRPCCCGCGCGC 126
>U55854-6|AAK68161.1| 197|Caenorhabditis elegans Hypothetical
protein C04G6.7 protein.
Length = 197
Score = 26.2 bits (55), Expect = 3.2
Identities = 9/23 (39%), Positives = 9/23 (39%)
Frame = -3
Query: 108 CILCCECISMGICTCVCLCVYEC 40
C CC C CT C C C
Sbjct: 97 CRRCCTCCRTCCCTRCCTCCRPC 119
Score = 24.6 bits (51), Expect = 9.8
Identities = 8/19 (42%), Positives = 8/19 (42%)
Frame = -3
Query: 108 CILCCECISMGICTCVCLC 52
C CC C C C C C
Sbjct: 109 CTRCCTCCRPCCCGCGCGC 127
>AL032632-5|CAA21585.1| 297|Caenorhabditis elegans Hypothetical
protein Y11D7A.9 protein.
Length = 297
Score = 25.8 bits (54), Expect = 4.3
Identities = 9/30 (30%), Positives = 14/30 (46%)
Frame = -1
Query: 113 SYVFYVASASLWVYVRVCVCVYMNVRINMC 24
S++ Y W Y +C Y V +N+C
Sbjct: 228 SFILYWRKCITWAYDVFALCEYSGVFLNIC 257
>Z81498-3|CAB04084.3| 260|Caenorhabditis elegans Hypothetical
protein F11A6.2 protein.
Length = 260
Score = 25.4 bits (53), Expect = 5.6
Identities = 8/20 (40%), Positives = 10/20 (50%)
Frame = -3
Query: 99 CCECISMGICTCVCLCVYEC 40
CC G C CV C ++C
Sbjct: 103 CCGGCCYGCCACVGCCQHDC 122
>Z75952-5|CAB00093.2| 149|Caenorhabditis elegans Hypothetical
protein F29D10.2 protein.
Length = 149
Score = 25.4 bits (53), Expect = 5.6
Identities = 9/23 (39%), Positives = 9/23 (39%)
Frame = -3
Query: 108 CILCCECISMGICTCVCLCVYEC 40
C CC C C C C C C
Sbjct: 91 CTRCCTCCRPCCCGCGCGCGCGC 113
Score = 24.6 bits (51), Expect = 9.8
Identities = 8/20 (40%), Positives = 8/20 (40%)
Frame = -3
Query: 99 CCECISMGICTCVCLCVYEC 40
CC C CT C C C
Sbjct: 82 CCTCCRTCCCTRCCTCCRPC 101
>EF445112-1|ABQ01579.1| 265|Caenorhabditis elegans scramblase 4
protein.
Length = 265
Score = 25.4 bits (53), Expect = 5.6
Identities = 8/20 (40%), Positives = 10/20 (50%)
Frame = -3
Query: 99 CCECISMGICTCVCLCVYEC 40
CC G C CV C ++C
Sbjct: 103 CCGGCCYGCCACVGCCQHDC 122
>AF039718-3|AAB96744.1| 329|Caenorhabditis elegans Hypothetical
protein T12F5.2 protein.
Length = 329
Score = 25.4 bits (53), Expect = 5.6
Identities = 10/27 (37%), Positives = 18/27 (66%)
Frame = +2
Query: 41 HSYTHRHTHVHIPIEMHSQHKIHTKSA 121
H+ TH ++PI ++ Q +++TKSA
Sbjct: 99 HNTTHHTVIEYLPIRLNYQLRMNTKSA 125
>AC199170-6|ABO33264.1| 325|Caenorhabditis elegans Hypothetical
protein T08D2.5 protein.
Length = 325
Score = 25.4 bits (53), Expect = 5.6
Identities = 10/27 (37%), Positives = 18/27 (66%)
Frame = +2
Query: 41 HSYTHRHTHVHIPIEMHSQHKIHTKSA 121
H+ TH ++PI ++ Q +++TKSA
Sbjct: 49 HNTTHHTVIEYLPIRLNYQLRMNTKSA 75
>Z70757-1|CAA94805.1| 497|Caenorhabditis elegans Hypothetical
protein ZK287.1 protein.
Length = 497
Score = 24.6 bits (51), Expect = 9.8
Identities = 9/27 (33%), Positives = 15/27 (55%), Gaps = 1/27 (3%)
Frame = -3
Query: 96 CECISMGI-CTCVCLCVYECTNKYVPR 19
C+C+ + C+ +C C C NK P+
Sbjct: 77 CDCLRIKEGCSKLCACKQICKNKEAPK 103
Score = 24.6 bits (51), Expect = 9.8
Identities = 9/22 (40%), Positives = 13/22 (59%), Gaps = 1/22 (4%)
Frame = -3
Query: 96 CECISM-GICTCVCLCVYECTN 34
C C ++ G C+ C C +CTN
Sbjct: 129 CACRTVYGFCSASCKCGGDCTN 150
>Z49886-6|CAI79131.1| 149|Caenorhabditis elegans Hypothetical
protein C06A1.7 protein.
Length = 149
Score = 24.6 bits (51), Expect = 9.8
Identities = 8/20 (40%), Positives = 8/20 (40%)
Frame = -3
Query: 99 CCECISMGICTCVCLCVYEC 40
CC C CT C C C
Sbjct: 84 CCTCCRTCCCTRCCTCCRPC 103
Score = 24.6 bits (51), Expect = 9.8
Identities = 8/19 (42%), Positives = 8/19 (42%)
Frame = -3
Query: 108 CILCCECISMGICTCVCLC 52
C CC C C C C C
Sbjct: 93 CTRCCTCCRPCCCGCGCGC 111
>Z49886-5|CAA90055.1| 152|Caenorhabditis elegans Hypothetical
protein C06A1.6 protein.
Length = 152
Score = 24.6 bits (51), Expect = 9.8
Identities = 8/20 (40%), Positives = 8/20 (40%)
Frame = -3
Query: 99 CCECISMGICTCVCLCVYEC 40
CC C CT C C C
Sbjct: 87 CCTCCRTCCCTRCCTCCRPC 106
Score = 24.6 bits (51), Expect = 9.8
Identities = 8/19 (42%), Positives = 8/19 (42%)
Frame = -3
Query: 108 CILCCECISMGICTCVCLC 52
C CC C C C C C
Sbjct: 96 CTRCCTCCRPCCCGCGCGC 114
>U40415-10|AAK39254.1| 215|Caenorhabditis elegans Dnaj domain
(prokaryotic heat shockprotein) protein 14 protein.
Length = 215
Score = 24.6 bits (51), Expect = 9.8
Identities = 11/27 (40%), Positives = 12/27 (44%)
Frame = -3
Query: 99 CCECISMGICTCVCLCVYECTNKYVPR 19
CC C M C C C C KY P+
Sbjct: 145 CCCCGCMCCCQC---CCNFCCGKYKPK 168
>L41807-1|AAA67369.1| 402|Caenorhabditis elegans fatty acid
desaturase protein.
Length = 402
Score = 24.6 bits (51), Expect = 9.8
Identities = 7/12 (58%), Positives = 9/12 (75%)
Frame = -3
Query: 93 ECISMGICTCVC 58
+C+ GIC CVC
Sbjct: 234 QCVISGICCCVC 245
>AL132951-8|CAC44309.1| 402|Caenorhabditis elegans Hypothetical
protein Y67H2A.8 protein.
Length = 402
Score = 24.6 bits (51), Expect = 9.8
Identities = 7/12 (58%), Positives = 9/12 (75%)
Frame = -3
Query: 93 ECISMGICTCVC 58
+C+ GIC CVC
Sbjct: 234 QCVISGICCCVC 245
Database: celegans
Posted date: Oct 23, 2007 1:18 PM
Number of letters in database: 12,740,198
Number of sequences in database: 27,780
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 3,197,387
Number of Sequences: 27780
Number of extensions: 48131
Number of successful extensions: 313
Number of sequences better than 10.0: 23
Number of HSP's better than 10.0 without gapping: 274
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 309
length of database: 12,740,198
effective HSP length: 22
effective length of database: 12,129,038
effective search space used: 230451722
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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