Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= S06A01NCLL0023_L03
(211 letters)
Database: tribolium
336 sequences; 122,585 total letters
Searching.......................................................done
Score E
Sequences producing significant alignments: (bits) Value
AY887136-1|AAW78361.1| 580|Tribolium castaneum vasa RNA helicas... 42 9e-07
DQ659250-1|ABG47448.1| 2700|Tribolium castaneum chitinase 10 pro... 24 0.19
EU019713-1|ABU25225.1| 528|Tribolium castaneum chitin deacetyla... 20 2.4
EU019712-1|ABU25224.1| 535|Tribolium castaneum chitin deacetyla... 20 2.4
EF468474-1|ABR25244.1| 516|Tribolium castaneum methoprene-toler... 19 4.1
AM292351-1|CAL23163.2| 394|Tribolium castaneum gustatory recept... 19 4.1
AM292350-1|CAL23162.2| 429|Tribolium castaneum gustatory recept... 19 4.1
AM292328-1|CAL23140.2| 429|Tribolium castaneum gustatory recept... 19 4.1
DQ372925-1|ABD17350.1| 596|Tribolium castaneum telomerase rever... 19 7.2
AM292369-1|CAL23181.1| 408|Tribolium castaneum gustatory recept... 18 9.5
>AY887136-1|AAW78361.1| 580|Tribolium castaneum vasa RNA helicase
protein.
Length = 580
Score = 41.5 bits (93), Expect = 9e-07
Identities = 22/65 (33%), Positives = 37/65 (56%), Gaps = 4/65 (6%)
Frame = +2
Query: 17 CMNSARGKTLAYILPAIVHI--NNQPPIRRGD--GPIALVLAPTRELAQQIQQVASEFGN 184
C + GKT A++LP I ++ + PP + P+ ++++PTRELA QI +F
Sbjct: 201 CAQTGSGKTAAFMLPIIHNLLSDKNPPNTENNCAQPVVVIMSPTRELAIQIADQGKKFAY 260
Query: 185 SSYVR 199
+S V+
Sbjct: 261 NSTVK 265
>DQ659250-1|ABG47448.1| 2700|Tribolium castaneum chitinase 10 protein.
Length = 2700
Score = 23.8 bits (49), Expect = 0.19
Identities = 10/20 (50%), Positives = 13/20 (65%)
Frame = +3
Query: 150 NKYSRLLQNLAIHLMFVIHV 209
+KYSRL+ N A F+ HV
Sbjct: 1484 DKYSRLVNNPAARARFIKHV 1503
Score = 23.0 bits (47), Expect = 0.34
Identities = 9/20 (45%), Positives = 13/20 (65%)
Frame = +3
Query: 150 NKYSRLLQNLAIHLMFVIHV 209
+KYSRL+ N + F+ HV
Sbjct: 1909 DKYSRLVNNPSARRRFIAHV 1928
Score = 22.6 bits (46), Expect = 0.44
Identities = 9/20 (45%), Positives = 12/20 (60%)
Frame = +3
Query: 150 NKYSRLLQNLAIHLMFVIHV 209
NKYSRL+ + F+ HV
Sbjct: 2407 NKYSRLVNDPQARAAFIAHV 2426
>EU019713-1|ABU25225.1| 528|Tribolium castaneum chitin deacetylase
2B protein.
Length = 528
Score = 20.2 bits (40), Expect = 2.4
Identities = 7/15 (46%), Positives = 12/15 (80%)
Frame = -3
Query: 59 VKYKPKFCLVPNSCS 15
+K +P +C +PNSC+
Sbjct: 477 IKGQP-YCSLPNSCA 490
>EU019712-1|ABU25224.1| 535|Tribolium castaneum chitin deacetylase
2A protein.
Length = 535
Score = 20.2 bits (40), Expect = 2.4
Identities = 7/15 (46%), Positives = 12/15 (80%)
Frame = -3
Query: 59 VKYKPKFCLVPNSCS 15
+K +P +C +PNSC+
Sbjct: 484 IKGQP-YCSLPNSCA 497
>EF468474-1|ABR25244.1| 516|Tribolium castaneum methoprene-tolerant
protein.
Length = 516
Score = 19.4 bits (38), Expect = 4.1
Identities = 9/15 (60%), Positives = 11/15 (73%)
Frame = -2
Query: 96 RMGG*LLICTMAGKI 52
++GG LLI T GKI
Sbjct: 111 QLGGFLLILTPNGKI 125
>AM292351-1|CAL23163.2| 394|Tribolium castaneum gustatory receptor
candidate 30 protein.
Length = 394
Score = 19.4 bits (38), Expect = 4.1
Identities = 10/30 (33%), Positives = 17/30 (56%)
Frame = -1
Query: 106 ITTPNGRLIINMYYGR*NISQSFASCRIHA 17
++T + +IN G+ N+ +SFA I A
Sbjct: 15 LSTADTANLINKSLGKHNLQKSFAKVVILA 44
>AM292350-1|CAL23162.2| 429|Tribolium castaneum gustatory receptor
candidate 29 protein.
Length = 429
Score = 19.4 bits (38), Expect = 4.1
Identities = 10/30 (33%), Positives = 17/30 (56%)
Frame = -1
Query: 106 ITTPNGRLIINMYYGR*NISQSFASCRIHA 17
++T + +IN G+ N+ +SFA I A
Sbjct: 15 LSTADTANLINKSLGKHNLQKSFAKVVILA 44
>AM292328-1|CAL23140.2| 429|Tribolium castaneum gustatory receptor
candidate 7 protein.
Length = 429
Score = 19.4 bits (38), Expect = 4.1
Identities = 10/30 (33%), Positives = 17/30 (56%)
Frame = -1
Query: 106 ITTPNGRLIINMYYGR*NISQSFASCRIHA 17
++T + +IN G+ N+ +SFA I A
Sbjct: 15 LSTADTANLINKSLGKHNLQKSFAKVVILA 44
>DQ372925-1|ABD17350.1| 596|Tribolium castaneum telomerase reverse
transcriptase protein.
Length = 596
Score = 18.6 bits (36), Expect = 7.2
Identities = 6/8 (75%), Positives = 7/8 (87%)
Frame = +3
Query: 24 IRHEAKLW 47
IRH+ KLW
Sbjct: 413 IRHKFKLW 420
>AM292369-1|CAL23181.1| 408|Tribolium castaneum gustatory receptor
candidate 48 protein.
Length = 408
Score = 18.2 bits (35), Expect = 9.5
Identities = 7/17 (41%), Positives = 11/17 (64%)
Frame = -1
Query: 91 GRLIINMYYGR*NISQS 41
G+L+IN+Y N +S
Sbjct: 116 GKLLINLYTINYNFKES 132
Database: tribolium
Posted date: Oct 23, 2007 1:18 PM
Number of letters in database: 122,585
Number of sequences in database: 336
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 51,108
Number of Sequences: 336
Number of extensions: 734
Number of successful extensions: 13
Number of sequences better than 10.0: 10
Number of HSP's better than 10.0 without gapping: 10
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 12
length of database: 122,585
effective HSP length: 45
effective length of database: 107,465
effective search space used: 2579160
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 35 (18.9 bits)
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