Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= S06A01NCLL0023_K24
(385 letters)
Database: bee
438 sequences; 146,343 total letters
Searching......................................................done
Score E
Sequences producing significant alignments: (bits) Value
AF015267-1|AAC38959.1| 461|Apis mellifera elongation factor-1al... 257 4e-71
X52884-1|CAA37066.1| 461|Apis mellifera elongation factor 1 alp... 251 2e-69
EF013227-1|ABK54581.1| 119|Apis mellifera elongation factor 1-a... 180 7e-48
AY208278-1|AAO48970.1| 274|Apis mellifera elongation factor 1-a... 164 4e-43
DQ435335-1|ABD92650.1| 135|Apis mellifera OBP18 protein. 30 0.011
AY686596-1|AAT96374.1| 1946|Apis mellifera Dscam protein. 24 0.70
AF388659-4|AAK71996.1| 1308|Apis mellifera NFRKB-like protein pr... 22 2.1
AY937243-1|AAX33677.1| 1370|Apis mellifera Toll-like receptor pr... 22 2.8
DQ026032-1|AAY87891.1| 566|Apis mellifera nicotinic acetylcholi... 21 3.7
AB264313-1|BAF43600.1| 900|Apis mellifera ecdysone-induced prot... 21 6.5
>AF015267-1|AAC38959.1| 461|Apis mellifera elongation factor-1alpha
F2 protein.
Length = 461
Score = 257 bits (629), Expect = 4e-71
Identities = 118/125 (94%), Positives = 122/125 (97%)
Frame = +1
Query: 10 LQDVYKIGGIGTVPVGRVETGILKPGTVVVFAPANITTEVKSVEMHHEALQEAVPGDNVG 189
LQDVYKIGGIGTVPVGRVETG+LKPG VV FAPA +TTEVKSVEMHHEALQEAVPGDNVG
Sbjct: 250 LQDVYKIGGIGTVPVGRVETGVLKPGMVVTFAPAGLTTEVKSVEMHHEALQEAVPGDNVG 309
Query: 190 FNVKNVSVKELRRGYVAGDSKNNPPRGAADFTAQVIVLNHPGQISNGYTPVLDCHTAHIA 369
FNVKNVSVKELRRGYVAGDSKNNPP+GAADFTAQVIVLNHPGQISNGYTPVLDCHTAHIA
Sbjct: 310 FNVKNVSVKELRRGYVAGDSKNNPPKGAADFTAQVIVLNHPGQISNGYTPVLDCHTAHIA 369
Query: 370 CKFAE 384
CKFA+
Sbjct: 370 CKFAD 374
>X52884-1|CAA37066.1| 461|Apis mellifera elongation factor 1 alpha
protein.
Length = 461
Score = 251 bits (615), Expect = 2e-69
Identities = 116/125 (92%), Positives = 120/125 (96%)
Frame = +1
Query: 10 LQDVYKIGGIGTVPVGRVETGILKPGTVVVFAPANITTEVKSVEMHHEALQEAVPGDNVG 189
LQDVYKIGGIGTVPVGRVETGILKPG +V FAPA +TTEVKSVEMHHEAL EA+PGDNVG
Sbjct: 250 LQDVYKIGGIGTVPVGRVETGILKPGMLVTFAPAALTTEVKSVEMHHEALTEALPGDNVG 309
Query: 190 FNVKNVSVKELRRGYVAGDSKNNPPRGAADFTAQVIVLNHPGQISNGYTPVLDCHTAHIA 369
FNVKN+SVKELRRGYVAGDSKN PPRGAADFTAQVIVLNHPGQISNGYTPVLDCHTAHIA
Sbjct: 310 FNVKNISVKELRRGYVAGDSKNQPPRGAADFTAQVIVLNHPGQISNGYTPVLDCHTAHIA 369
Query: 370 CKFAE 384
CKFAE
Sbjct: 370 CKFAE 374
Score = 21.4 bits (43), Expect = 3.7
Identities = 12/34 (35%), Positives = 17/34 (50%)
Frame = -3
Query: 182 LSPGTASCRASWCISTDLTSVVMLAGAKTTTVPG 81
L PG A ++T++ SV M A T +PG
Sbjct: 272 LKPGMLVTFAPAALTTEVKSVEMHHEALTEALPG 305
>EF013227-1|ABK54581.1| 119|Apis mellifera elongation factor
1-alpha protein.
Length = 119
Score = 180 bits (437), Expect = 7e-48
Identities = 81/85 (95%), Positives = 83/85 (97%)
Frame = +1
Query: 130 KSVEMHHEALQEAVPGDNVGFNVKNVSVKELRRGYVAGDSKNNPPRGAADFTAQVIVLNH 309
KSVEMHHEAL EA+PGDNVGFNVKN+SVKELRRGYVAGDSKN PPRGAADFTAQVIVLNH
Sbjct: 1 KSVEMHHEALTEALPGDNVGFNVKNISVKELRRGYVAGDSKNQPPRGAADFTAQVIVLNH 60
Query: 310 PGQISNGYTPVLDCHTAHIACKFAE 384
PGQISNGYTPVLDCHTAHIACKFAE
Sbjct: 61 PGQISNGYTPVLDCHTAHIACKFAE 85
>AY208278-1|AAO48970.1| 274|Apis mellifera elongation factor
1-alpha protein.
Length = 274
Score = 164 bits (398), Expect = 4e-43
Identities = 77/82 (93%), Positives = 79/82 (96%)
Frame = +1
Query: 10 LQDVYKIGGIGTVPVGRVETGILKPGTVVVFAPANITTEVKSVEMHHEALQEAVPGDNVG 189
LQDVYKIGGIGTVPVGRVETG+LKPG VV FAPA +TTEVKSVEMHHEALQEAVPGDNVG
Sbjct: 193 LQDVYKIGGIGTVPVGRVETGVLKPGMVVTFAPAGLTTEVKSVEMHHEALQEAVPGDNVG 252
Query: 190 FNVKNVSVKELRRGYVAGDSKN 255
FNVKNVSVKELRRGYVAGDSKN
Sbjct: 253 FNVKNVSVKELRRGYVAGDSKN 274
>DQ435335-1|ABD92650.1| 135|Apis mellifera OBP18 protein.
Length = 135
Score = 29.9 bits (64), Expect = 0.011
Identities = 20/67 (29%), Positives = 32/67 (47%)
Frame = +1
Query: 22 YKIGGIGTVPVGRVETGILKPGTVVVFAPANITTEVKSVEMHHEALQEAVPGDNVGFNVK 201
++IG VP+ R+ET I F NI E + V++ E L + G + G N
Sbjct: 22 FQIGLRAVVPICRIETSI-DQQKEDDFRDGNIDVEDEKVQLFSECLIKKFNGYDDGGNFN 80
Query: 202 NVSVKEL 222
V ++E+
Sbjct: 81 EVVIREI 87
>AY686596-1|AAT96374.1| 1946|Apis mellifera Dscam protein.
Length = 1946
Score = 23.8 bits (49), Expect = 0.70
Identities = 12/37 (32%), Positives = 17/37 (45%)
Frame = +3
Query: 252 KQPTQGSCRLHSASHCAKSPRSNIKRIHTCIGLPHSP 362
K TQ S + + + P S +R HT G+P P
Sbjct: 1048 KTYTQYSVVVQAFNKVGSGPMSEERRQHTAEGVPEQP 1084
>AF388659-4|AAK71996.1| 1308|Apis mellifera NFRKB-like protein
protein.
Length = 1308
Score = 22.2 bits (45), Expect = 2.1
Identities = 8/39 (20%), Positives = 20/39 (51%)
Frame = -3
Query: 143 ISTDLTSVVMLAGAKTTTVPGFRIPVSTLPTGTVPIPPI 27
+ T++T+ + ++ G +P+++LP + I I
Sbjct: 831 VVTNVTTTINTPTTSVISMSGTTVPITSLPASSTSINSI 869
>AY937243-1|AAX33677.1| 1370|Apis mellifera Toll-like receptor
protein.
Length = 1370
Score = 21.8 bits (44), Expect = 2.8
Identities = 11/36 (30%), Positives = 20/36 (55%)
Frame = +1
Query: 208 SVKELRRGYVAGDSKNNPPRGAADFTAQVIVLNHPG 315
S ++LR ++A + + P+G Q++VLN G
Sbjct: 283 STRDLREIHLAYNGLRDLPKGIFTRLEQLLVLNLAG 318
>DQ026032-1|AAY87891.1| 566|Apis mellifera nicotinic acetylcholine
receptor alpha3subunit protein.
Length = 566
Score = 21.4 bits (43), Expect = 3.7
Identities = 11/41 (26%), Positives = 18/41 (43%)
Frame = +2
Query: 179 TMLVSTSKTYLSRNCAVVTLQEIRKTTHPGELQTSQRKSLC 301
++ V TS + L + + + R HP EL+ S C
Sbjct: 402 SLFVETSASELVESSVLFPSLDSRDELHPRELEAVNLGSAC 442
>AB264313-1|BAF43600.1| 900|Apis mellifera ecdysone-induced protein
75 protein.
Length = 900
Score = 20.6 bits (41), Expect = 6.5
Identities = 10/21 (47%), Positives = 11/21 (52%)
Frame = +3
Query: 255 QPTQGSCRLHSASHCAKSPRS 317
Q TQ LH S A+SP S
Sbjct: 665 QHTQSQLHLHLTSPPARSPSS 685
Database: bee
Posted date: Oct 23, 2007 1:17 PM
Number of letters in database: 146,343
Number of sequences in database: 438
Lambda K H
0.317 0.136 0.402
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 119,684
Number of Sequences: 438
Number of extensions: 2352
Number of successful extensions: 11
Number of sequences better than 10.0: 10
Number of HSP's better than 10.0 without gapping: 10
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 11
length of database: 146,343
effective HSP length: 51
effective length of database: 124,005
effective search space used: 9424380
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 40 (21.2 bits)
- SilkBase 1999-2023 -