Samia BLAST Result against mosquito

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= S06A01NCLL0023_K23
         (299 letters)

Database: mosquito 
           2352 sequences; 563,979 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

AJ438610-1|CAD27473.1|  838|Anopheles gambiae putative microtubu...    26   0.35 
AY341161-1|AAR13725.1|  159|Anopheles gambiae CED6 protein.            25   0.82 
AY753541-1|AAV28544.1| 3398|Anopheles gambiae SGS4 protein.            24   1.1  
AY341160-1|AAR13724.1|  159|Anopheles gambiae CED6 protein.            24   1.4  
AY341159-1|AAR13723.1|  159|Anopheles gambiae CED6 protein.            24   1.4  
AY341158-1|AAR13722.1|  159|Anopheles gambiae CED6 protein.            24   1.4  
AY341157-1|AAR13721.1|  159|Anopheles gambiae CED6 protein.            24   1.4  
AJ438610-3|CAD27475.1|  190|Anopheles gambiae putative RHO small...    23   1.9  
CR954257-5|CAJ14156.1|  227|Anopheles gambiae predicted protein ...    23   2.5  
AY705401-1|AAU12510.1|  490|Anopheles gambiae nicotinic acetylch...    23   3.3  
AY705400-1|AAU12509.1|  490|Anopheles gambiae nicotinic acetylch...    23   3.3  
AJ130949-1|CAA10258.1|  401|Anopheles gambiae SG1 protein protein.     22   4.3  
AF364130-1|AAL35506.1|  417|Anopheles gambiae putative odorant r...    22   5.7  

>AJ438610-1|CAD27473.1|  838|Anopheles gambiae putative microtubule
           binding protein protein.
          Length = 838

 Score = 25.8 bits (54), Expect = 0.35
 Identities = 14/29 (48%), Positives = 18/29 (62%), Gaps = 2/29 (6%)
 Frame = -3

Query: 90  APVLSAQXITAPTGRPSE--MRNFAPAEP 10
           APV+ +  +TAP  RPS+     FAP EP
Sbjct: 91  APVVPSSVVTAPPARPSQPPTTRFAP-EP 118


>AY341161-1|AAR13725.1|  159|Anopheles gambiae CED6 protein.
          Length = 159

 Score = 24.6 bits (51), Expect = 0.82
 Identities = 11/39 (28%), Positives = 16/39 (41%)
 Frame = +2

Query: 50  PVGAVXHCADNTGAKNLYVIAVQGINGRLNRLPAAGSGD 166
           P+  + +CAD  G K  +    +   G       A SGD
Sbjct: 67  PLHKISYCADEKGVKKFFSFIAKTGTGATPTSSIASSGD 105


>AY753541-1|AAV28544.1| 3398|Anopheles gambiae SGS4 protein.
          Length = 3398

 Score = 24.2 bits (50), Expect = 1.1
 Identities = 12/43 (27%), Positives = 23/43 (53%)
 Frame = -2

Query: 292  IILEIYEHPVPPSKWFPLPDHHCWHYLFHEFWFAFLNCGHNHV 164
            II +  + P+  +KW  L  H   ++ F+E +   ++ G +HV
Sbjct: 1727 IIYDEIDRPIMQTKWTKLTSHLKEYFAFYENFITQVH-GTSHV 1768


>AY341160-1|AAR13724.1|  159|Anopheles gambiae CED6 protein.
          Length = 159

 Score = 23.8 bits (49), Expect = 1.4
 Identities = 11/39 (28%), Positives = 16/39 (41%)
 Frame = +2

Query: 50  PVGAVXHCADNTGAKNLYVIAVQGINGRLNRLPAAGSGD 166
           P+  + +CAD  G K  +    +   G       A SGD
Sbjct: 67  PLHKISYCADEKGVKKFFSFIAKTGTGVTPTSSIASSGD 105


>AY341159-1|AAR13723.1|  159|Anopheles gambiae CED6 protein.
          Length = 159

 Score = 23.8 bits (49), Expect = 1.4
 Identities = 11/39 (28%), Positives = 16/39 (41%)
 Frame = +2

Query: 50  PVGAVXHCADNTGAKNLYVIAVQGINGRLNRLPAAGSGD 166
           P+  + +CAD  G K  +    +   G       A SGD
Sbjct: 67  PLHKISYCADEKGVKKFFSFIAKTGTGVTPTSSIASSGD 105


>AY341158-1|AAR13722.1|  159|Anopheles gambiae CED6 protein.
          Length = 159

 Score = 23.8 bits (49), Expect = 1.4
 Identities = 11/39 (28%), Positives = 16/39 (41%)
 Frame = +2

Query: 50  PVGAVXHCADNTGAKNLYVIAVQGINGRLNRLPAAGSGD 166
           P+  + +CAD  G K  +    +   G       A SGD
Sbjct: 67  PLHKISYCADEKGVKKFFSFIAKTGTGVTPTSSIASSGD 105


>AY341157-1|AAR13721.1|  159|Anopheles gambiae CED6 protein.
          Length = 159

 Score = 23.8 bits (49), Expect = 1.4
 Identities = 11/39 (28%), Positives = 16/39 (41%)
 Frame = +2

Query: 50  PVGAVXHCADNTGAKNLYVIAVQGINGRLNRLPAAGSGD 166
           P+  + +CAD  G K  +    +   G       A SGD
Sbjct: 67  PLHKISYCADEKGVKKFFSFIAKTGTGVTPTSSIASSGD 105


>AJ438610-3|CAD27475.1|  190|Anopheles gambiae putative RHO small
           GTPase protein.
          Length = 190

 Score = 23.4 bits (48), Expect = 1.9
 Identities = 7/11 (63%), Positives = 8/11 (72%)
 Frame = -2

Query: 256 SKWFPLPDHHC 224
           SKW+P   HHC
Sbjct: 98  SKWYPEIKHHC 108


>CR954257-5|CAJ14156.1|  227|Anopheles gambiae predicted protein
           protein.
          Length = 227

 Score = 23.0 bits (47), Expect = 2.5
 Identities = 10/19 (52%), Positives = 12/19 (63%)
 Frame = +1

Query: 100 VCDCRTRYQWSSEQVTSCW 156
           VCDCR  Y +S  Q  SC+
Sbjct: 81  VCDCRPGYVYSPPQ-DSCY 98


>AY705401-1|AAU12510.1|  490|Anopheles gambiae nicotinic
           acetylcholine receptor subunitalpha 6 protein.
          Length = 490

 Score = 22.6 bits (46), Expect = 3.3
 Identities = 6/9 (66%), Positives = 6/9 (66%)
 Frame = -2

Query: 250 WFPLPDHHC 224
           WFP  D HC
Sbjct: 154 WFPFDDQHC 162


>AY705400-1|AAU12509.1|  490|Anopheles gambiae nicotinic
           acetylcholine receptor subunitalpha 6 protein.
          Length = 490

 Score = 22.6 bits (46), Expect = 3.3
 Identities = 6/9 (66%), Positives = 6/9 (66%)
 Frame = -2

Query: 250 WFPLPDHHC 224
           WFP  D HC
Sbjct: 154 WFPFDDQHC 162


>AJ130949-1|CAA10258.1|  401|Anopheles gambiae SG1 protein protein.
          Length = 401

 Score = 22.2 bits (45), Expect = 4.3
 Identities = 14/43 (32%), Positives = 19/43 (44%)
 Frame = +2

Query: 47  LPVGAVXHCADNTGAKNLYVIAVQGINGRLNRLPAAGSGDMIV 175
           L +G +   + N  A+ LY+        RL     AGS D IV
Sbjct: 234 LDLGKLAFLSQNADARQLYLGLFNPALKRLQAAVIAGSYDEIV 276


>AF364130-1|AAL35506.1|  417|Anopheles gambiae putative odorant
           receptor Or1 protein.
          Length = 417

 Score = 21.8 bits (44), Expect = 5.7
 Identities = 7/16 (43%), Positives = 9/16 (56%)
 Frame = -2

Query: 274 EHPVPPSKWFPLPDHH 227
           E  +P   WFP+  HH
Sbjct: 161 ERRLPVPAWFPVDYHH 176


  Database: mosquito
    Posted date:  Oct 23, 2007  1:18 PM
  Number of letters in database: 563,979
  Number of sequences in database:  2352
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 358,558
Number of Sequences: 2352
Number of extensions: 7156
Number of successful extensions: 17
Number of sequences better than 10.0: 13
Number of HSP's better than 10.0 without gapping: 17
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 17
length of database: 563,979
effective HSP length: 55
effective length of database: 434,619
effective search space used: 19123236
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)