SilkBase IMG001 IMG002 IMG003 IMG005 IMG006 IMG007 IMG008 IMG009 kuwako IMG010 IMG011 IMG012

Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= S06A01NCLL0023_K23
         (299 letters)

Database: human 
           237,096 sequences; 76,859,062 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

BC062716-1|AAH62716.1|  140|Homo sapiens ribosomal protein L23 p...   176   1e-44
X55954-1|CAA39417.1|  140|Homo sapiens HL23 ribosomal protein pr...   175   2e-44
X52839-1|CAA37023.1|  140|Homo sapiens ribosomal protein L17 pro...   175   2e-44
BC106061-1|AAI06062.1|  140|Homo sapiens RPL23 protein protein.       175   2e-44
BC104651-1|AAI04652.1|  140|Homo sapiens ribosomal protein L23 p...   175   2e-44
BC010114-1|AAH10114.1|  140|Homo sapiens ribosomal protein L23 p...   175   2e-44
BC003518-1|AAH03518.1|  134|Homo sapiens Similar to ribosomal pr...   175   2e-44
AB061827-1|BAB79465.1|  140|Homo sapiens ribosomal protein L23 p...   175   2e-44
BC034378-1|AAH34378.1|   77|Homo sapiens RPL23 protein protein.       126   1e-29
AB040880-1|BAA95971.1| 1721|Homo sapiens KIAA1447 protein protein.     30   1.5  
BC101482-1|AAI01483.1|  655|Homo sapiens hypothetical protein LO...    29   2.7  
BC065706-1|AAH65706.1|  564|Homo sapiens C12orf51 protein protein.     29   2.7  
AK091473-1|BAC03671.1|  655|Homo sapiens protein ( Homo sapiens ...    29   2.7  
BC011924-1|AAH11924.1|  277|Homo sapiens unkempt-like protein.         28   4.7  
AL032819-2|CAM26346.1|  277|Homo sapiens unkempt-like (Drosophil...    28   4.7  
AL032819-1|CAM26345.1|  332|Homo sapiens unkempt-like (Drosophil...    28   4.7  
AL031721-4|CAM26441.1|  277|Homo sapiens unkempt-like (Drosophil...    28   4.7  
AL031721-3|CAM26440.1|  332|Homo sapiens unkempt-like (Drosophil...    28   4.7  
AE006467-5|AAK61279.1|  756|Homo sapiens Ce protein similar to D...    28   4.7  
BC058032-1|AAH58032.1|  351|Homo sapiens C14orf118 protein protein.    28   6.2  
AB032978-1|BAA86466.1|  354|Homo sapiens KIAA1152 protein protein.     28   6.2  
BC050677-1|AAH50677.1|  585|Homo sapiens proline rich 14 protein.      27   8.2  
BC021934-1|AAH21934.1|  585|Homo sapiens PRR14 protein protein.        27   8.2  
BC000119-1|AAH00119.1|  585|Homo sapiens proline rich 14 protein.      27   8.2  
AK074783-1|BAC11207.1|  585|Homo sapiens protein ( Homo sapiens ...    27   8.2  

>BC062716-1|AAH62716.1|  140|Homo sapiens ribosomal protein L23
           protein.
          Length = 140

 Score =  176 bits (428), Expect = 1e-44
 Identities = 81/97 (83%), Positives = 91/97 (93%)
 Frame = +2

Query: 8   GGSAGAKFRISLGLPVGAVXHCADNTGAKNLYVIAVQGINGRLNRLPAAGSGDMIVATVK 187
           GGS+GAKFRISLGLPVGAV +CADNTGAKNLY+I+V+GI GRLNRLPAAG GDM++ATVK
Sbjct: 7   GGSSGAKFRISLGLPVGAVINCADNTGAKNLYIISVKGIKGRLNRLPAAGVGDMVMATVK 66

Query: 188 KGKPELMKKVMPAVVIRQRKPFRRRDGVFIYFEDNAG 298
           KGKPEL KKV PAVVIRQRK +RR+DGVF+YFEDNAG
Sbjct: 67  KGKPELRKKVRPAVVIRQRKSYRRKDGVFLYFEDNAG 103


>X55954-1|CAA39417.1|  140|Homo sapiens HL23 ribosomal protein
           protein.
          Length = 140

 Score =  175 bits (427), Expect = 2e-44
 Identities = 81/97 (83%), Positives = 91/97 (93%)
 Frame = +2

Query: 8   GGSAGAKFRISLGLPVGAVXHCADNTGAKNLYVIAVQGINGRLNRLPAAGSGDMIVATVK 187
           GGS+GAKFRISLGLPVGAV +CADNTGAKNLY+I+V+GI GRLNRLPAAG GDM++ATVK
Sbjct: 7   GGSSGAKFRISLGLPVGAVINCADNTGAKNLYIISVKGIKGRLNRLPAAGVGDMVMATVK 66

Query: 188 KGKPELMKKVMPAVVIRQRKPFRRRDGVFIYFEDNAG 298
           KGKPEL KKV PAVVIRQRK +RR+DGVF+YFEDNAG
Sbjct: 67  KGKPELRKKVHPAVVIRQRKSYRRKDGVFLYFEDNAG 103


>X52839-1|CAA37023.1|  140|Homo sapiens ribosomal protein L17
           protein.
          Length = 140

 Score =  175 bits (427), Expect = 2e-44
 Identities = 81/97 (83%), Positives = 91/97 (93%)
 Frame = +2

Query: 8   GGSAGAKFRISLGLPVGAVXHCADNTGAKNLYVIAVQGINGRLNRLPAAGSGDMIVATVK 187
           GGS+GAKFRISLGLPVGAV +CADNTGAKNLY+I+V+GI GRLNRLPAAG GDM++ATVK
Sbjct: 7   GGSSGAKFRISLGLPVGAVINCADNTGAKNLYIISVKGIKGRLNRLPAAGVGDMVMATVK 66

Query: 188 KGKPELMKKVMPAVVIRQRKPFRRRDGVFIYFEDNAG 298
           KGKPEL KKV PAVVIRQRK +RR+DGVF+YFEDNAG
Sbjct: 67  KGKPELRKKVHPAVVIRQRKSYRRKDGVFLYFEDNAG 103


>BC106061-1|AAI06062.1|  140|Homo sapiens RPL23 protein protein.
          Length = 140

 Score =  175 bits (427), Expect = 2e-44
 Identities = 81/97 (83%), Positives = 91/97 (93%)
 Frame = +2

Query: 8   GGSAGAKFRISLGLPVGAVXHCADNTGAKNLYVIAVQGINGRLNRLPAAGSGDMIVATVK 187
           GGS+GAKFRISLGLPVGAV +CADNTGAKNLY+I+V+GI GRLNRLPAAG GDM++ATVK
Sbjct: 7   GGSSGAKFRISLGLPVGAVINCADNTGAKNLYIISVKGIKGRLNRLPAAGVGDMVMATVK 66

Query: 188 KGKPELMKKVMPAVVIRQRKPFRRRDGVFIYFEDNAG 298
           KGKPEL KKV PAVVIRQRK +RR+DGVF+YFEDNAG
Sbjct: 67  KGKPELRKKVHPAVVIRQRKSYRRKDGVFLYFEDNAG 103


>BC104651-1|AAI04652.1|  140|Homo sapiens ribosomal protein L23
           protein.
          Length = 140

 Score =  175 bits (427), Expect = 2e-44
 Identities = 81/97 (83%), Positives = 91/97 (93%)
 Frame = +2

Query: 8   GGSAGAKFRISLGLPVGAVXHCADNTGAKNLYVIAVQGINGRLNRLPAAGSGDMIVATVK 187
           GGS+GAKFRISLGLPVGAV +CADNTGAKNLY+I+V+GI GRLNRLPAAG GDM++ATVK
Sbjct: 7   GGSSGAKFRISLGLPVGAVINCADNTGAKNLYIISVKGIKGRLNRLPAAGVGDMVMATVK 66

Query: 188 KGKPELMKKVMPAVVIRQRKPFRRRDGVFIYFEDNAG 298
           KGKPEL KKV PAVVIRQRK +RR+DGVF+YFEDNAG
Sbjct: 67  KGKPELRKKVHPAVVIRQRKSYRRKDGVFLYFEDNAG 103


>BC010114-1|AAH10114.1|  140|Homo sapiens ribosomal protein L23
           protein.
          Length = 140

 Score =  175 bits (427), Expect = 2e-44
 Identities = 81/97 (83%), Positives = 91/97 (93%)
 Frame = +2

Query: 8   GGSAGAKFRISLGLPVGAVXHCADNTGAKNLYVIAVQGINGRLNRLPAAGSGDMIVATVK 187
           GGS+GAKFRISLGLPVGAV +CADNTGAKNLY+I+V+GI GRLNRLPAAG GDM++ATVK
Sbjct: 7   GGSSGAKFRISLGLPVGAVINCADNTGAKNLYIISVKGIKGRLNRLPAAGVGDMVMATVK 66

Query: 188 KGKPELMKKVMPAVVIRQRKPFRRRDGVFIYFEDNAG 298
           KGKPEL KKV PAVVIRQRK +RR+DGVF+YFEDNAG
Sbjct: 67  KGKPELRKKVHPAVVIRQRKSYRRKDGVFLYFEDNAG 103


>BC003518-1|AAH03518.1|  134|Homo sapiens Similar to ribosomal
           protein L23 protein.
          Length = 134

 Score =  175 bits (427), Expect = 2e-44
 Identities = 81/97 (83%), Positives = 91/97 (93%)
 Frame = +2

Query: 8   GGSAGAKFRISLGLPVGAVXHCADNTGAKNLYVIAVQGINGRLNRLPAAGSGDMIVATVK 187
           GGS+GAKFRISLGLPVGAV +CADNTGAKNLY+I+V+GI GRLNRLPAAG GDM++ATVK
Sbjct: 1   GGSSGAKFRISLGLPVGAVINCADNTGAKNLYIISVKGIKGRLNRLPAAGVGDMVMATVK 60

Query: 188 KGKPELMKKVMPAVVIRQRKPFRRRDGVFIYFEDNAG 298
           KGKPEL KKV PAVVIRQRK +RR+DGVF+YFEDNAG
Sbjct: 61  KGKPELRKKVHPAVVIRQRKSYRRKDGVFLYFEDNAG 97


>AB061827-1|BAB79465.1|  140|Homo sapiens ribosomal protein L23
           protein.
          Length = 140

 Score =  175 bits (427), Expect = 2e-44
 Identities = 81/97 (83%), Positives = 91/97 (93%)
 Frame = +2

Query: 8   GGSAGAKFRISLGLPVGAVXHCADNTGAKNLYVIAVQGINGRLNRLPAAGSGDMIVATVK 187
           GGS+GAKFRISLGLPVGAV +CADNTGAKNLY+I+V+GI GRLNRLPAAG GDM++ATVK
Sbjct: 7   GGSSGAKFRISLGLPVGAVINCADNTGAKNLYIISVKGIKGRLNRLPAAGVGDMVMATVK 66

Query: 188 KGKPELMKKVMPAVVIRQRKPFRRRDGVFIYFEDNAG 298
           KGKPEL KKV PAVVIRQRK +RR+DGVF+YFEDNAG
Sbjct: 67  KGKPELRKKVHPAVVIRQRKSYRRKDGVFLYFEDNAG 103


>BC034378-1|AAH34378.1|   77|Homo sapiens RPL23 protein protein.
          Length = 77

 Score =  126 bits (304), Expect = 1e-29
 Identities = 58/69 (84%), Positives = 65/69 (94%)
 Frame = +2

Query: 8   GGSAGAKFRISLGLPVGAVXHCADNTGAKNLYVIAVQGINGRLNRLPAAGSGDMIVATVK 187
           GGS+GAKFRISLGLPVGAV +CADNTGAKNLY+I+V+GI GRLNRLPAAG GDM++ATVK
Sbjct: 7   GGSSGAKFRISLGLPVGAVINCADNTGAKNLYIISVKGIKGRLNRLPAAGVGDMVMATVK 66

Query: 188 KGKPELMKK 214
           KGKPEL KK
Sbjct: 67  KGKPELRKK 75


>AB040880-1|BAA95971.1| 1721|Homo sapiens KIAA1447 protein protein.
          Length = 1721

 Score = 29.9 bits (64), Expect = 1.5
 Identities = 11/21 (52%), Positives = 12/21 (57%)
 Frame = -3

Query: 63  TAPTGRPSEMRNFAPAEPPSC 1
           TAP  +P   R F P EPP C
Sbjct: 376 TAPGAQPEPTRTFLPGEPPPC 396


>BC101482-1|AAI01483.1|  655|Homo sapiens hypothetical protein
           LOC283450 protein.
          Length = 655

 Score = 29.1 bits (62), Expect = 2.7
 Identities = 13/35 (37%), Positives = 19/35 (54%)
 Frame = -3

Query: 288 SSKYMNTPSRLLNGFRCLITTAGITFFMSSGLPFL 184
           S +  NTP + + GF C +     +  +S GLPFL
Sbjct: 497 SGREHNTPDKAMWGFACTVRAQESSEDVSGGLPFL 531


>BC065706-1|AAH65706.1|  564|Homo sapiens C12orf51 protein protein.
          Length = 564

 Score = 29.1 bits (62), Expect = 2.7
 Identities = 13/35 (37%), Positives = 19/35 (54%)
 Frame = -3

Query: 288 SSKYMNTPSRLLNGFRCLITTAGITFFMSSGLPFL 184
           S +  NTP + + GF C +     +  +S GLPFL
Sbjct: 495 SGREHNTPDKAMWGFACTVRAQESSEDVSGGLPFL 529


>AK091473-1|BAC03671.1|  655|Homo sapiens protein ( Homo sapiens
           cDNA FLJ34154 fis, clone FCBBF3013058. ).
          Length = 655

 Score = 29.1 bits (62), Expect = 2.7
 Identities = 13/35 (37%), Positives = 19/35 (54%)
 Frame = -3

Query: 288 SSKYMNTPSRLLNGFRCLITTAGITFFMSSGLPFL 184
           S +  NTP + + GF C +     +  +S GLPFL
Sbjct: 497 SGREHNTPDKAMWGFACTVRAQESSEDVSGGLPFL 531


>BC011924-1|AAH11924.1|  277|Homo sapiens unkempt-like protein.
          Length = 277

 Score = 28.3 bits (60), Expect = 4.7
 Identities = 11/18 (61%), Positives = 13/18 (72%)
 Frame = +2

Query: 236 RQRKPFRRRDGVFIYFED 289
           R+R+P RRRDG F Y  D
Sbjct: 61  RRRRPLRRRDGTFNYSPD 78


>AL032819-2|CAM26346.1|  277|Homo sapiens unkempt-like (Drosophila)
           protein.
          Length = 277

 Score = 28.3 bits (60), Expect = 4.7
 Identities = 11/18 (61%), Positives = 13/18 (72%)
 Frame = +2

Query: 236 RQRKPFRRRDGVFIYFED 289
           R+R+P RRRDG F Y  D
Sbjct: 61  RRRRPLRRRDGTFNYSPD 78


>AL032819-1|CAM26345.1|  332|Homo sapiens unkempt-like (Drosophila)
           protein.
          Length = 332

 Score = 28.3 bits (60), Expect = 4.7
 Identities = 11/18 (61%), Positives = 13/18 (72%)
 Frame = +2

Query: 236 RQRKPFRRRDGVFIYFED 289
           R+R+P RRRDG F Y  D
Sbjct: 61  RRRRPLRRRDGTFNYSPD 78


>AL031721-4|CAM26441.1|  277|Homo sapiens unkempt-like (Drosophila)
           protein.
          Length = 277

 Score = 28.3 bits (60), Expect = 4.7
 Identities = 11/18 (61%), Positives = 13/18 (72%)
 Frame = +2

Query: 236 RQRKPFRRRDGVFIYFED 289
           R+R+P RRRDG F Y  D
Sbjct: 61  RRRRPLRRRDGTFNYSPD 78


>AL031721-3|CAM26440.1|  332|Homo sapiens unkempt-like (Drosophila)
           protein.
          Length = 332

 Score = 28.3 bits (60), Expect = 4.7
 Identities = 11/18 (61%), Positives = 13/18 (72%)
 Frame = +2

Query: 236 RQRKPFRRRDGVFIYFED 289
           R+R+P RRRDG F Y  D
Sbjct: 61  RRRRPLRRRDGTFNYSPD 78


>AE006467-5|AAK61279.1|  756|Homo sapiens Ce protein similar to Dm
           Cys3His finger protein protein.
          Length = 756

 Score = 28.3 bits (60), Expect = 4.7
 Identities = 11/18 (61%), Positives = 13/18 (72%)
 Frame = +2

Query: 236 RQRKPFRRRDGVFIYFED 289
           R+R+P RRRDG F Y  D
Sbjct: 61  RRRRPLRRRDGTFNYSPD 78


>BC058032-1|AAH58032.1|  351|Homo sapiens C14orf118 protein protein.
          Length = 351

 Score = 27.9 bits (59), Expect = 6.2
 Identities = 16/41 (39%), Positives = 24/41 (58%)
 Frame = +2

Query: 110 AVQGINGRLNRLPAAGSGDMIVATVKKGKPELMKKVMPAVV 232
           A +G + RLNRLP A +       ++KG+  L+ KV+P  V
Sbjct: 299 AQRGYHTRLNRLPGAAA-----RCLRKGRRRLVGKVIPLTV 334


>AB032978-1|BAA86466.1|  354|Homo sapiens KIAA1152 protein protein.
          Length = 354

 Score = 27.9 bits (59), Expect = 6.2
 Identities = 16/41 (39%), Positives = 24/41 (58%)
 Frame = +2

Query: 110 AVQGINGRLNRLPAAGSGDMIVATVKKGKPELMKKVMPAVV 232
           A +G + RLNRLP A +       ++KG+  L+ KV+P  V
Sbjct: 302 AQRGYHTRLNRLPGAAA-----RCLRKGRRRLVGKVIPLTV 337


>BC050677-1|AAH50677.1|  585|Homo sapiens proline rich 14 protein.
          Length = 585

 Score = 27.5 bits (58), Expect = 8.2
 Identities = 9/24 (37%), Positives = 15/24 (62%)
 Frame = -2

Query: 289 ILEIYEHPVPPSKWFPLPDHHCWH 218
           ++ ++  PV PSK   +P HH +H
Sbjct: 59  VMAVHMVPVVPSKQTSIPQHHSYH 82


>BC021934-1|AAH21934.1|  585|Homo sapiens PRR14 protein protein.
          Length = 585

 Score = 27.5 bits (58), Expect = 8.2
 Identities = 9/24 (37%), Positives = 15/24 (62%)
 Frame = -2

Query: 289 ILEIYEHPVPPSKWFPLPDHHCWH 218
           ++ ++  PV PSK   +P HH +H
Sbjct: 59  VMAVHMVPVVPSKQTSIPQHHSYH 82


>BC000119-1|AAH00119.1|  585|Homo sapiens proline rich 14 protein.
          Length = 585

 Score = 27.5 bits (58), Expect = 8.2
 Identities = 9/24 (37%), Positives = 15/24 (62%)
 Frame = -2

Query: 289 ILEIYEHPVPPSKWFPLPDHHCWH 218
           ++ ++  PV PSK   +P HH +H
Sbjct: 59  VMAVHMVPVVPSKQTSIPQHHSYH 82


>AK074783-1|BAC11207.1|  585|Homo sapiens protein ( Homo sapiens
           cDNA FLJ90302 fis, clone NT2RP2000616, weakly similar to
           EXTENSIN PRECURSOR. ).
          Length = 585

 Score = 27.5 bits (58), Expect = 8.2
 Identities = 9/24 (37%), Positives = 15/24 (62%)
 Frame = -2

Query: 289 ILEIYEHPVPPSKWFPLPDHHCWH 218
           ++ ++  PV PSK   +P HH +H
Sbjct: 59  VMAVHMVPVVPSKQTSIPQHHSYH 82


  Database: human
    Posted date:  Oct 23, 2007  1:18 PM
  Number of letters in database: 76,859,062
  Number of sequences in database:  237,096
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 51,849,838
Number of Sequences: 237096
Number of extensions: 1129622
Number of successful extensions: 2368
Number of sequences better than 10.0: 25
Number of HSP's better than 10.0 without gapping: 2324
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 2368
length of database: 76,859,062
effective HSP length: 76
effective length of database: 58,839,766
effective search space used: 1353314618
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)

- SilkBase 1999-2023 -