BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= S06A01NCLL0023_K23
(299 letters)
Database: human
237,096 sequences; 76,859,062 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
BC062716-1|AAH62716.1| 140|Homo sapiens ribosomal protein L23 p... 176 1e-44
X55954-1|CAA39417.1| 140|Homo sapiens HL23 ribosomal protein pr... 175 2e-44
X52839-1|CAA37023.1| 140|Homo sapiens ribosomal protein L17 pro... 175 2e-44
BC106061-1|AAI06062.1| 140|Homo sapiens RPL23 protein protein. 175 2e-44
BC104651-1|AAI04652.1| 140|Homo sapiens ribosomal protein L23 p... 175 2e-44
BC010114-1|AAH10114.1| 140|Homo sapiens ribosomal protein L23 p... 175 2e-44
BC003518-1|AAH03518.1| 134|Homo sapiens Similar to ribosomal pr... 175 2e-44
AB061827-1|BAB79465.1| 140|Homo sapiens ribosomal protein L23 p... 175 2e-44
BC034378-1|AAH34378.1| 77|Homo sapiens RPL23 protein protein. 126 1e-29
AB040880-1|BAA95971.1| 1721|Homo sapiens KIAA1447 protein protein. 30 1.5
BC101482-1|AAI01483.1| 655|Homo sapiens hypothetical protein LO... 29 2.7
BC065706-1|AAH65706.1| 564|Homo sapiens C12orf51 protein protein. 29 2.7
AK091473-1|BAC03671.1| 655|Homo sapiens protein ( Homo sapiens ... 29 2.7
BC011924-1|AAH11924.1| 277|Homo sapiens unkempt-like protein. 28 4.7
AL032819-2|CAM26346.1| 277|Homo sapiens unkempt-like (Drosophil... 28 4.7
AL032819-1|CAM26345.1| 332|Homo sapiens unkempt-like (Drosophil... 28 4.7
AL031721-4|CAM26441.1| 277|Homo sapiens unkempt-like (Drosophil... 28 4.7
AL031721-3|CAM26440.1| 332|Homo sapiens unkempt-like (Drosophil... 28 4.7
AE006467-5|AAK61279.1| 756|Homo sapiens Ce protein similar to D... 28 4.7
BC058032-1|AAH58032.1| 351|Homo sapiens C14orf118 protein protein. 28 6.2
AB032978-1|BAA86466.1| 354|Homo sapiens KIAA1152 protein protein. 28 6.2
BC050677-1|AAH50677.1| 585|Homo sapiens proline rich 14 protein. 27 8.2
BC021934-1|AAH21934.1| 585|Homo sapiens PRR14 protein protein. 27 8.2
BC000119-1|AAH00119.1| 585|Homo sapiens proline rich 14 protein. 27 8.2
AK074783-1|BAC11207.1| 585|Homo sapiens protein ( Homo sapiens ... 27 8.2
>BC062716-1|AAH62716.1| 140|Homo sapiens ribosomal protein L23
protein.
Length = 140
Score = 176 bits (428), Expect = 1e-44
Identities = 81/97 (83%), Positives = 91/97 (93%)
Frame = +2
Query: 8 GGSAGAKFRISLGLPVGAVXHCADNTGAKNLYVIAVQGINGRLNRLPAAGSGDMIVATVK 187
GGS+GAKFRISLGLPVGAV +CADNTGAKNLY+I+V+GI GRLNRLPAAG GDM++ATVK
Sbjct: 7 GGSSGAKFRISLGLPVGAVINCADNTGAKNLYIISVKGIKGRLNRLPAAGVGDMVMATVK 66
Query: 188 KGKPELMKKVMPAVVIRQRKPFRRRDGVFIYFEDNAG 298
KGKPEL KKV PAVVIRQRK +RR+DGVF+YFEDNAG
Sbjct: 67 KGKPELRKKVRPAVVIRQRKSYRRKDGVFLYFEDNAG 103
>X55954-1|CAA39417.1| 140|Homo sapiens HL23 ribosomal protein
protein.
Length = 140
Score = 175 bits (427), Expect = 2e-44
Identities = 81/97 (83%), Positives = 91/97 (93%)
Frame = +2
Query: 8 GGSAGAKFRISLGLPVGAVXHCADNTGAKNLYVIAVQGINGRLNRLPAAGSGDMIVATVK 187
GGS+GAKFRISLGLPVGAV +CADNTGAKNLY+I+V+GI GRLNRLPAAG GDM++ATVK
Sbjct: 7 GGSSGAKFRISLGLPVGAVINCADNTGAKNLYIISVKGIKGRLNRLPAAGVGDMVMATVK 66
Query: 188 KGKPELMKKVMPAVVIRQRKPFRRRDGVFIYFEDNAG 298
KGKPEL KKV PAVVIRQRK +RR+DGVF+YFEDNAG
Sbjct: 67 KGKPELRKKVHPAVVIRQRKSYRRKDGVFLYFEDNAG 103
>X52839-1|CAA37023.1| 140|Homo sapiens ribosomal protein L17
protein.
Length = 140
Score = 175 bits (427), Expect = 2e-44
Identities = 81/97 (83%), Positives = 91/97 (93%)
Frame = +2
Query: 8 GGSAGAKFRISLGLPVGAVXHCADNTGAKNLYVIAVQGINGRLNRLPAAGSGDMIVATVK 187
GGS+GAKFRISLGLPVGAV +CADNTGAKNLY+I+V+GI GRLNRLPAAG GDM++ATVK
Sbjct: 7 GGSSGAKFRISLGLPVGAVINCADNTGAKNLYIISVKGIKGRLNRLPAAGVGDMVMATVK 66
Query: 188 KGKPELMKKVMPAVVIRQRKPFRRRDGVFIYFEDNAG 298
KGKPEL KKV PAVVIRQRK +RR+DGVF+YFEDNAG
Sbjct: 67 KGKPELRKKVHPAVVIRQRKSYRRKDGVFLYFEDNAG 103
>BC106061-1|AAI06062.1| 140|Homo sapiens RPL23 protein protein.
Length = 140
Score = 175 bits (427), Expect = 2e-44
Identities = 81/97 (83%), Positives = 91/97 (93%)
Frame = +2
Query: 8 GGSAGAKFRISLGLPVGAVXHCADNTGAKNLYVIAVQGINGRLNRLPAAGSGDMIVATVK 187
GGS+GAKFRISLGLPVGAV +CADNTGAKNLY+I+V+GI GRLNRLPAAG GDM++ATVK
Sbjct: 7 GGSSGAKFRISLGLPVGAVINCADNTGAKNLYIISVKGIKGRLNRLPAAGVGDMVMATVK 66
Query: 188 KGKPELMKKVMPAVVIRQRKPFRRRDGVFIYFEDNAG 298
KGKPEL KKV PAVVIRQRK +RR+DGVF+YFEDNAG
Sbjct: 67 KGKPELRKKVHPAVVIRQRKSYRRKDGVFLYFEDNAG 103
>BC104651-1|AAI04652.1| 140|Homo sapiens ribosomal protein L23
protein.
Length = 140
Score = 175 bits (427), Expect = 2e-44
Identities = 81/97 (83%), Positives = 91/97 (93%)
Frame = +2
Query: 8 GGSAGAKFRISLGLPVGAVXHCADNTGAKNLYVIAVQGINGRLNRLPAAGSGDMIVATVK 187
GGS+GAKFRISLGLPVGAV +CADNTGAKNLY+I+V+GI GRLNRLPAAG GDM++ATVK
Sbjct: 7 GGSSGAKFRISLGLPVGAVINCADNTGAKNLYIISVKGIKGRLNRLPAAGVGDMVMATVK 66
Query: 188 KGKPELMKKVMPAVVIRQRKPFRRRDGVFIYFEDNAG 298
KGKPEL KKV PAVVIRQRK +RR+DGVF+YFEDNAG
Sbjct: 67 KGKPELRKKVHPAVVIRQRKSYRRKDGVFLYFEDNAG 103
>BC010114-1|AAH10114.1| 140|Homo sapiens ribosomal protein L23
protein.
Length = 140
Score = 175 bits (427), Expect = 2e-44
Identities = 81/97 (83%), Positives = 91/97 (93%)
Frame = +2
Query: 8 GGSAGAKFRISLGLPVGAVXHCADNTGAKNLYVIAVQGINGRLNRLPAAGSGDMIVATVK 187
GGS+GAKFRISLGLPVGAV +CADNTGAKNLY+I+V+GI GRLNRLPAAG GDM++ATVK
Sbjct: 7 GGSSGAKFRISLGLPVGAVINCADNTGAKNLYIISVKGIKGRLNRLPAAGVGDMVMATVK 66
Query: 188 KGKPELMKKVMPAVVIRQRKPFRRRDGVFIYFEDNAG 298
KGKPEL KKV PAVVIRQRK +RR+DGVF+YFEDNAG
Sbjct: 67 KGKPELRKKVHPAVVIRQRKSYRRKDGVFLYFEDNAG 103
>BC003518-1|AAH03518.1| 134|Homo sapiens Similar to ribosomal
protein L23 protein.
Length = 134
Score = 175 bits (427), Expect = 2e-44
Identities = 81/97 (83%), Positives = 91/97 (93%)
Frame = +2
Query: 8 GGSAGAKFRISLGLPVGAVXHCADNTGAKNLYVIAVQGINGRLNRLPAAGSGDMIVATVK 187
GGS+GAKFRISLGLPVGAV +CADNTGAKNLY+I+V+GI GRLNRLPAAG GDM++ATVK
Sbjct: 1 GGSSGAKFRISLGLPVGAVINCADNTGAKNLYIISVKGIKGRLNRLPAAGVGDMVMATVK 60
Query: 188 KGKPELMKKVMPAVVIRQRKPFRRRDGVFIYFEDNAG 298
KGKPEL KKV PAVVIRQRK +RR+DGVF+YFEDNAG
Sbjct: 61 KGKPELRKKVHPAVVIRQRKSYRRKDGVFLYFEDNAG 97
>AB061827-1|BAB79465.1| 140|Homo sapiens ribosomal protein L23
protein.
Length = 140
Score = 175 bits (427), Expect = 2e-44
Identities = 81/97 (83%), Positives = 91/97 (93%)
Frame = +2
Query: 8 GGSAGAKFRISLGLPVGAVXHCADNTGAKNLYVIAVQGINGRLNRLPAAGSGDMIVATVK 187
GGS+GAKFRISLGLPVGAV +CADNTGAKNLY+I+V+GI GRLNRLPAAG GDM++ATVK
Sbjct: 7 GGSSGAKFRISLGLPVGAVINCADNTGAKNLYIISVKGIKGRLNRLPAAGVGDMVMATVK 66
Query: 188 KGKPELMKKVMPAVVIRQRKPFRRRDGVFIYFEDNAG 298
KGKPEL KKV PAVVIRQRK +RR+DGVF+YFEDNAG
Sbjct: 67 KGKPELRKKVHPAVVIRQRKSYRRKDGVFLYFEDNAG 103
>BC034378-1|AAH34378.1| 77|Homo sapiens RPL23 protein protein.
Length = 77
Score = 126 bits (304), Expect = 1e-29
Identities = 58/69 (84%), Positives = 65/69 (94%)
Frame = +2
Query: 8 GGSAGAKFRISLGLPVGAVXHCADNTGAKNLYVIAVQGINGRLNRLPAAGSGDMIVATVK 187
GGS+GAKFRISLGLPVGAV +CADNTGAKNLY+I+V+GI GRLNRLPAAG GDM++ATVK
Sbjct: 7 GGSSGAKFRISLGLPVGAVINCADNTGAKNLYIISVKGIKGRLNRLPAAGVGDMVMATVK 66
Query: 188 KGKPELMKK 214
KGKPEL KK
Sbjct: 67 KGKPELRKK 75
>AB040880-1|BAA95971.1| 1721|Homo sapiens KIAA1447 protein protein.
Length = 1721
Score = 29.9 bits (64), Expect = 1.5
Identities = 11/21 (52%), Positives = 12/21 (57%)
Frame = -3
Query: 63 TAPTGRPSEMRNFAPAEPPSC 1
TAP +P R F P EPP C
Sbjct: 376 TAPGAQPEPTRTFLPGEPPPC 396
>BC101482-1|AAI01483.1| 655|Homo sapiens hypothetical protein
LOC283450 protein.
Length = 655
Score = 29.1 bits (62), Expect = 2.7
Identities = 13/35 (37%), Positives = 19/35 (54%)
Frame = -3
Query: 288 SSKYMNTPSRLLNGFRCLITTAGITFFMSSGLPFL 184
S + NTP + + GF C + + +S GLPFL
Sbjct: 497 SGREHNTPDKAMWGFACTVRAQESSEDVSGGLPFL 531
>BC065706-1|AAH65706.1| 564|Homo sapiens C12orf51 protein protein.
Length = 564
Score = 29.1 bits (62), Expect = 2.7
Identities = 13/35 (37%), Positives = 19/35 (54%)
Frame = -3
Query: 288 SSKYMNTPSRLLNGFRCLITTAGITFFMSSGLPFL 184
S + NTP + + GF C + + +S GLPFL
Sbjct: 495 SGREHNTPDKAMWGFACTVRAQESSEDVSGGLPFL 529
>AK091473-1|BAC03671.1| 655|Homo sapiens protein ( Homo sapiens
cDNA FLJ34154 fis, clone FCBBF3013058. ).
Length = 655
Score = 29.1 bits (62), Expect = 2.7
Identities = 13/35 (37%), Positives = 19/35 (54%)
Frame = -3
Query: 288 SSKYMNTPSRLLNGFRCLITTAGITFFMSSGLPFL 184
S + NTP + + GF C + + +S GLPFL
Sbjct: 497 SGREHNTPDKAMWGFACTVRAQESSEDVSGGLPFL 531
>BC011924-1|AAH11924.1| 277|Homo sapiens unkempt-like protein.
Length = 277
Score = 28.3 bits (60), Expect = 4.7
Identities = 11/18 (61%), Positives = 13/18 (72%)
Frame = +2
Query: 236 RQRKPFRRRDGVFIYFED 289
R+R+P RRRDG F Y D
Sbjct: 61 RRRRPLRRRDGTFNYSPD 78
>AL032819-2|CAM26346.1| 277|Homo sapiens unkempt-like (Drosophila)
protein.
Length = 277
Score = 28.3 bits (60), Expect = 4.7
Identities = 11/18 (61%), Positives = 13/18 (72%)
Frame = +2
Query: 236 RQRKPFRRRDGVFIYFED 289
R+R+P RRRDG F Y D
Sbjct: 61 RRRRPLRRRDGTFNYSPD 78
>AL032819-1|CAM26345.1| 332|Homo sapiens unkempt-like (Drosophila)
protein.
Length = 332
Score = 28.3 bits (60), Expect = 4.7
Identities = 11/18 (61%), Positives = 13/18 (72%)
Frame = +2
Query: 236 RQRKPFRRRDGVFIYFED 289
R+R+P RRRDG F Y D
Sbjct: 61 RRRRPLRRRDGTFNYSPD 78
>AL031721-4|CAM26441.1| 277|Homo sapiens unkempt-like (Drosophila)
protein.
Length = 277
Score = 28.3 bits (60), Expect = 4.7
Identities = 11/18 (61%), Positives = 13/18 (72%)
Frame = +2
Query: 236 RQRKPFRRRDGVFIYFED 289
R+R+P RRRDG F Y D
Sbjct: 61 RRRRPLRRRDGTFNYSPD 78
>AL031721-3|CAM26440.1| 332|Homo sapiens unkempt-like (Drosophila)
protein.
Length = 332
Score = 28.3 bits (60), Expect = 4.7
Identities = 11/18 (61%), Positives = 13/18 (72%)
Frame = +2
Query: 236 RQRKPFRRRDGVFIYFED 289
R+R+P RRRDG F Y D
Sbjct: 61 RRRRPLRRRDGTFNYSPD 78
>AE006467-5|AAK61279.1| 756|Homo sapiens Ce protein similar to Dm
Cys3His finger protein protein.
Length = 756
Score = 28.3 bits (60), Expect = 4.7
Identities = 11/18 (61%), Positives = 13/18 (72%)
Frame = +2
Query: 236 RQRKPFRRRDGVFIYFED 289
R+R+P RRRDG F Y D
Sbjct: 61 RRRRPLRRRDGTFNYSPD 78
>BC058032-1|AAH58032.1| 351|Homo sapiens C14orf118 protein protein.
Length = 351
Score = 27.9 bits (59), Expect = 6.2
Identities = 16/41 (39%), Positives = 24/41 (58%)
Frame = +2
Query: 110 AVQGINGRLNRLPAAGSGDMIVATVKKGKPELMKKVMPAVV 232
A +G + RLNRLP A + ++KG+ L+ KV+P V
Sbjct: 299 AQRGYHTRLNRLPGAAA-----RCLRKGRRRLVGKVIPLTV 334
>AB032978-1|BAA86466.1| 354|Homo sapiens KIAA1152 protein protein.
Length = 354
Score = 27.9 bits (59), Expect = 6.2
Identities = 16/41 (39%), Positives = 24/41 (58%)
Frame = +2
Query: 110 AVQGINGRLNRLPAAGSGDMIVATVKKGKPELMKKVMPAVV 232
A +G + RLNRLP A + ++KG+ L+ KV+P V
Sbjct: 302 AQRGYHTRLNRLPGAAA-----RCLRKGRRRLVGKVIPLTV 337
>BC050677-1|AAH50677.1| 585|Homo sapiens proline rich 14 protein.
Length = 585
Score = 27.5 bits (58), Expect = 8.2
Identities = 9/24 (37%), Positives = 15/24 (62%)
Frame = -2
Query: 289 ILEIYEHPVPPSKWFPLPDHHCWH 218
++ ++ PV PSK +P HH +H
Sbjct: 59 VMAVHMVPVVPSKQTSIPQHHSYH 82
>BC021934-1|AAH21934.1| 585|Homo sapiens PRR14 protein protein.
Length = 585
Score = 27.5 bits (58), Expect = 8.2
Identities = 9/24 (37%), Positives = 15/24 (62%)
Frame = -2
Query: 289 ILEIYEHPVPPSKWFPLPDHHCWH 218
++ ++ PV PSK +P HH +H
Sbjct: 59 VMAVHMVPVVPSKQTSIPQHHSYH 82
>BC000119-1|AAH00119.1| 585|Homo sapiens proline rich 14 protein.
Length = 585
Score = 27.5 bits (58), Expect = 8.2
Identities = 9/24 (37%), Positives = 15/24 (62%)
Frame = -2
Query: 289 ILEIYEHPVPPSKWFPLPDHHCWH 218
++ ++ PV PSK +P HH +H
Sbjct: 59 VMAVHMVPVVPSKQTSIPQHHSYH 82
>AK074783-1|BAC11207.1| 585|Homo sapiens protein ( Homo sapiens
cDNA FLJ90302 fis, clone NT2RP2000616, weakly similar to
EXTENSIN PRECURSOR. ).
Length = 585
Score = 27.5 bits (58), Expect = 8.2
Identities = 9/24 (37%), Positives = 15/24 (62%)
Frame = -2
Query: 289 ILEIYEHPVPPSKWFPLPDHHCWH 218
++ ++ PV PSK +P HH +H
Sbjct: 59 VMAVHMVPVVPSKQTSIPQHHSYH 82
Database: human
Posted date: Oct 23, 2007 1:18 PM
Number of letters in database: 76,859,062
Number of sequences in database: 237,096
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 51,849,838
Number of Sequences: 237096
Number of extensions: 1129622
Number of successful extensions: 2368
Number of sequences better than 10.0: 25
Number of HSP's better than 10.0 without gapping: 2324
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 2368
length of database: 76,859,062
effective HSP length: 76
effective length of database: 58,839,766
effective search space used: 1353314618
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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