Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= S06A01NCLL0023_K22
(331 letters)
Database: spombe
5004 sequences; 2,362,478 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
SPAC8E11.02c |rad24||14-3-3 protein Rad24|Schizosaccharomyces po... 150 5e-38
SPAC17A2.13c |rad25||14-3-3 protein Rad25|Schizosaccharomyces po... 149 1e-37
SPBC16H5.05c |cyp7|cwf27|cyclophilin family peptidyl-prolyl cis-... 27 0.97
SPAC24C9.07c |bgs2|meu21, pgs2|1,3-beta-glucan synthase subunit ... 27 0.97
SPAC323.04 |||mitochondrial ATPase |Schizosaccharomyces pombe|ch... 26 1.7
SPCC188.11 |prp45|cwf13, snw1, SPCC584.08|transcriptional regula... 25 2.2
SPAC3G6.11 |||ATP-dependent DNA helicase Chl1|Schizosaccharomyce... 25 2.2
SPAC21E11.08 |lcb2|SPAC2C4.02|serine palmitoyltransferase |Schiz... 25 2.2
SPBC211.07c |ubc8||ubiquitin conjugating enzyme Ubc8|Schizosacch... 25 3.0
SPBC839.10 |usp107|snu71|U1 snRNP-associated protein Usp107|Schi... 25 3.0
SPAC1486.05 |nup189||nucleoporin Nup189|Schizosaccharomyces pomb... 25 3.0
SPBP35G2.04c |||sequence orphan|Schizosaccharomyces pombe|chr 2|... 25 3.0
SPAC3A11.05c |kms1||meiotic spindle pole body protein Kms1|Schiz... 25 3.9
SPBC15C4.04c |||amino acid permease, unknown 10|Schizosaccharomy... 25 3.9
SPAC664.02c |||actin-like protein Arp8 |Schizosaccharomyces pomb... 25 3.9
SPBC11C11.07 |rpl1801|rpl18-1, rpl18|60S ribosomal protein L18|S... 25 3.9
SPBC1683.05 |||thiamine transporter |Schizosaccharomyces pombe|c... 24 5.2
SPAPB17E12.13 |rpl1802|rpl18-2|60S ribosomal protein L18|Schizos... 24 5.2
SPBC902.02c |ctf18|chl12|DNA replication factor C complex subuni... 24 5.2
SPCC622.16c |epe1||Jmjc domain chromatin associated protein Epe1... 24 5.2
SPBC6B1.04 |mde4||monopolin-like complex subunit Mde4|Schizosacc... 24 5.2
SPBC21C3.05 |sap62||zinc finger protein Sap62|Schizosaccharomyce... 24 6.8
SPAC31G5.15 |||phosphatidylserine decarboxylase |Schizosaccharom... 23 9.0
SPAC6G9.04 |mug79||meiotically upregulated gene Mug79|Schizosacc... 23 9.0
SPBC119.07 |ppk19||serine/threonine protein kinase Ppk19|Schizos... 23 9.0
SPBC12C2.02c |ste20|ste16|sterility protein Ste20|Schizosaccharo... 23 9.0
SPAC17H9.06c |||conserved fungal protein|Schizosaccharomyces pom... 23 9.0
>SPAC8E11.02c |rad24||14-3-3 protein Rad24|Schizosaccharomyces
pombe|chr 1|||Manual
Length = 270
Score = 150 bits (364), Expect = 5e-38
Identities = 73/109 (66%), Positives = 89/109 (81%), Gaps = 3/109 (2%)
Frame = +3
Query: 9 ELSNEERNLLSVAYKNVVGARRSSWRVISSIEQKTE--GSERKQQMAKEYRVKVEKELRE 182
EL+ EERNLLSVAYKNV+GARR+SWR++SSIEQK E G+ + ++ KEYR K+E+EL
Sbjct: 38 ELTVEERNLLSVAYKNVIGARRASWRIVSSIEQKEESKGNTAQVELIKEYRQKIEQELDT 97
Query: 183 ICYDVLCLLDKHLIPKASNPESKVFYLKMKGDYYRYLAEVATGETR-HS 326
IC D+L +L+KHLIP A++ ESKVFY KMKGDYYRYLAE A GE R HS
Sbjct: 98 ICQDILTVLEKHLIPNAASAESKVFYYKMKGDYYRYLAEFAVGEKRQHS 146
>SPAC17A2.13c |rad25||14-3-3 protein Rad25|Schizosaccharomyces
pombe|chr 1|||Manual
Length = 270
Score = 149 bits (361), Expect = 1e-37
Identities = 71/104 (68%), Positives = 85/104 (81%), Gaps = 2/104 (1%)
Frame = +3
Query: 9 ELSNEERNLLSVAYKNVVGARRSSWRVISSIEQKTE--GSERKQQMAKEYRVKVEKELRE 182
+LS EERNLLSVAYKN++GARR+SWR+ISSIEQK E G+ R+ + KEYR K+E EL +
Sbjct: 37 KLSVEERNLLSVAYKNIIGARRASWRIISSIEQKEESRGNTRQAALIKEYRKKIEDELSD 96
Query: 183 ICYDVLCLLDKHLIPKASNPESKVFYLKMKGDYYRYLAEVATGE 314
IC+DVL +L+KHLIP A+ ESKVFY KMKGDYYRYLAE GE
Sbjct: 97 ICHDVLSVLEKHLIPAATTGESKVFYYKMKGDYYRYLAEFTVGE 140
>SPBC16H5.05c |cyp7|cwf27|cyclophilin family peptidyl-prolyl
cis-trans isomerase Cyp7|Schizosaccharomyces pombe|chr
2|||Manual
Length = 463
Score = 26.6 bits (56), Expect = 0.97
Identities = 12/39 (30%), Positives = 20/39 (51%)
Frame = +3
Query: 51 KNVVGARRSSWRVISSIEQKTEGSERKQQMAKEYRVKVE 167
KN+ S+ R +SS + K +E + M +Y K+E
Sbjct: 350 KNLENDEESTLRALSSFQSKIRNAEDEDVMDSQYGSKIE 388
>SPAC24C9.07c |bgs2|meu21, pgs2|1,3-beta-glucan synthase subunit
Bgs2|Schizosaccharomyces pombe|chr 1|||Manual
Length = 1894
Score = 26.6 bits (56), Expect = 0.97
Identities = 11/31 (35%), Positives = 18/31 (58%)
Frame = -3
Query: 224 YKVLVQ*TQDIIADFSELLFYFNPIFFCHLL 132
+ L Q ++++I +EL F+ F CHLL
Sbjct: 1755 FHALSQPSRELICKMTELNFFAADFFLCHLL 1785
>SPAC323.04 |||mitochondrial ATPase |Schizosaccharomyces pombe|chr
1|||Manual
Length = 487
Score = 25.8 bits (54), Expect = 1.7
Identities = 12/45 (26%), Positives = 22/45 (48%)
Frame = +3
Query: 39 SVAYKNVVGARRSSWRVISSIEQKTEGSERKQQMAKEYRVKVEKE 173
S +Y + G S W+ I ++ K+ G +R ++ Y +KE
Sbjct: 61 SFSYPFLKGKSDSPWQAIQLLDFKSSGQQRAAYYSERYHSFRDKE 105
>SPCC188.11 |prp45|cwf13, snw1, SPCC584.08|transcriptional regulator
Prp45|Schizosaccharomyces pombe|chr 3|||Manual
Length = 557
Score = 25.4 bits (53), Expect = 2.2
Identities = 17/50 (34%), Positives = 28/50 (56%), Gaps = 3/50 (6%)
Frame = +3
Query: 39 SVAYKNVVGARRSSWRVISSIEQKTEGSE---RKQQMAKEYRVKVEKELR 179
SV+ + +R S+ S E + E SE R+Q++ +E R + EK+LR
Sbjct: 358 SVSSEERSRSRAGSFSHHSESENEDEDSEAFRRRQELRRERRRQAEKDLR 407
>SPAC3G6.11 |||ATP-dependent DNA helicase Chl1|Schizosaccharomyces
pombe|chr 1|||Manual
Length = 844
Score = 25.4 bits (53), Expect = 2.2
Identities = 16/36 (44%), Positives = 21/36 (58%), Gaps = 3/36 (8%)
Frame = +3
Query: 195 VLCLLDKHLIPKASN-PESKVFYLKMKGD--YYRYL 293
VL L+ L+ A+ PE K+FY K GD Y +YL
Sbjct: 509 VLMQLESFLLNIANPAPEGKLFYEKQTGDNPYLKYL 544
>SPAC21E11.08 |lcb2|SPAC2C4.02|serine palmitoyltransferase
|Schizosaccharomyces pombe|chr 1|||Manual
Length = 603
Score = 25.4 bits (53), Expect = 2.2
Identities = 8/21 (38%), Positives = 14/21 (66%)
Frame = -3
Query: 305 GHFCEIPVVISLHFEVKYFTF 243
G+FC++P V+ L K++ F
Sbjct: 341 GNFCDLPKVVELKNRYKFYLF 361
>SPBC211.07c |ubc8||ubiquitin conjugating enzyme
Ubc8|Schizosaccharomyces pombe|chr 2|||Manual
Length = 184
Score = 25.0 bits (52), Expect = 3.0
Identities = 12/29 (41%), Positives = 18/29 (62%)
Frame = +1
Query: 28 ETFFPLLIKMWSAPDGHHGESFPLLNRKP 114
E F P L++ +A D +GE+ LL R+P
Sbjct: 104 EVFLPQLLRYPNASDPLNGEAAALLLREP 132
>SPBC839.10 |usp107|snu71|U1 snRNP-associated protein
Usp107|Schizosaccharomyces pombe|chr 2|||Manual
Length = 695
Score = 25.0 bits (52), Expect = 3.0
Identities = 13/42 (30%), Positives = 22/42 (52%)
Frame = +3
Query: 105 QKTEGSERKQQMAKEYRVKVEKELREICYDVLCLLDKHLIPK 230
+K + + KEY K +++LR+ D+ LL KH I +
Sbjct: 328 EKQRSKDEYASLYKEYTRKEQEKLRKQNDDLQNLLSKHRISR 369
>SPAC1486.05 |nup189||nucleoporin Nup189|Schizosaccharomyces pombe|chr
1|||Manual
Length = 1778
Score = 25.0 bits (52), Expect = 3.0
Identities = 14/45 (31%), Positives = 23/45 (51%), Gaps = 3/45 (6%)
Frame = +3
Query: 204 LLDKHLIPKASNPESKVFYLKMKGDYYR---YLAEVATGETRHSV 329
+++K IP++ E+K Y + GD+ +L E A E H V
Sbjct: 1608 MIEKLCIPESWLNEAKALYARYVGDHLNELYFLQEAALYEDAHKV 1652
>SPBP35G2.04c |||sequence orphan|Schizosaccharomyces pombe|chr
2|||Manual
Length = 249
Score = 25.0 bits (52), Expect = 3.0
Identities = 10/20 (50%), Positives = 14/20 (70%), Gaps = 1/20 (5%)
Frame = -3
Query: 290 IPVVISLHFEVKYFT-FWIT 234
+P++I LHF K FT W+T
Sbjct: 62 LPILIRLHFYKKLFTILWLT 81
>SPAC3A11.05c |kms1||meiotic spindle pole body protein
Kms1|Schizosaccharomyces pombe|chr 1|||Manual
Length = 607
Score = 24.6 bits (51), Expect = 3.9
Identities = 14/40 (35%), Positives = 19/40 (47%)
Frame = +3
Query: 210 DKHLIPKASNPESKVFYLKMKGDYYRYLAEVATGETRHSV 329
+KHLI ++NP+ F D Y EV T+ SV
Sbjct: 354 EKHLIALSNNPKGDEFLSPSNLDEMVYSKEVGLSFTQPSV 393
>SPBC15C4.04c |||amino acid permease, unknown 10|Schizosaccharomyces
pombe|chr 2|||Manual
Length = 542
Score = 24.6 bits (51), Expect = 3.9
Identities = 13/30 (43%), Positives = 17/30 (56%), Gaps = 1/30 (3%)
Frame = +3
Query: 9 ELSNEERN-LLSVAYKNVVGARRSSWRVIS 95
E+SN+E N LL + YK V S+W S
Sbjct: 39 EVSNDEDNQLLELGYKPVFKREFSTWATFS 68
>SPAC664.02c |||actin-like protein Arp8 |Schizosaccharomyces
pombe|chr 1|||Manual
Length = 620
Score = 24.6 bits (51), Expect = 3.9
Identities = 10/23 (43%), Positives = 14/23 (60%)
Frame = +3
Query: 192 DVLCLLDKHLIPKASNPESKVFY 260
DV+C + L+P PE K+FY
Sbjct: 178 DVICGKEAFLLPLNEYPEYKLFY 200
>SPBC11C11.07 |rpl1801|rpl18-1, rpl18|60S ribosomal protein
L18|Schizosaccharomyces pombe|chr 2|||Manual
Length = 187
Score = 24.6 bits (51), Expect = 3.9
Identities = 12/32 (37%), Positives = 20/32 (62%), Gaps = 2/32 (6%)
Frame = +3
Query: 207 LDKHLIPKA--SNPESKVFYLKMKGDYYRYLA 296
+++H + K+ S P S+ YLK+ YR+LA
Sbjct: 5 IERHHVKKSQRSKPASENVYLKLLVKLYRFLA 36
>SPBC1683.05 |||thiamine transporter |Schizosaccharomyces pombe|chr
2|||Manual
Length = 559
Score = 24.2 bits (50), Expect = 5.2
Identities = 7/22 (31%), Positives = 14/22 (63%)
Frame = -3
Query: 278 ISLHFEVKYFTFWITSFRYKVL 213
I+ F + YF +W+ SF + ++
Sbjct: 194 ITSDFLISYFVYWVISFPFHLI 215
>SPAPB17E12.13 |rpl1802|rpl18-2|60S ribosomal protein
L18|Schizosaccharomyces pombe|chr 1|||Manual
Length = 187
Score = 24.2 bits (50), Expect = 5.2
Identities = 12/32 (37%), Positives = 20/32 (62%), Gaps = 2/32 (6%)
Frame = +3
Query: 207 LDKHLIPKA--SNPESKVFYLKMKGDYYRYLA 296
+++H + K+ S P S+ YLK+ YR+LA
Sbjct: 5 IERHHVRKSQRSKPASENVYLKLLVKLYRFLA 36
>SPBC902.02c |ctf18|chl12|DNA replication factor C complex subunit
Ctf18|Schizosaccharomyces pombe|chr 2|||Manual
Length = 960
Score = 24.2 bits (50), Expect = 5.2
Identities = 9/53 (16%), Positives = 27/53 (50%), Gaps = 2/53 (3%)
Frame = +3
Query: 114 EGSERKQQMAKEYRVKVEKELREICYDVLCLLDKHLIP--KASNPESKVFYLK 266
E E+ + ++ K +K+ +++C ++C+ + P + P +++ Y +
Sbjct: 500 ESDEKATEYSQAGNSKKKKKFKKLCRPIICICNDLYTPALRPLRPYAQIIYFR 552
>SPCC622.16c |epe1||Jmjc domain chromatin associated protein
Epe1|Schizosaccharomyces pombe|chr 3|||Manual
Length = 948
Score = 24.2 bits (50), Expect = 5.2
Identities = 16/62 (25%), Positives = 30/62 (48%)
Frame = +1
Query: 73 GHHGESFPLLNRKPKGRKENNRWQKNIGLK*KRSSEKSAMMSCVYWTSTLYLKLVIQKVK 252
G + SF L+ ++ K K+ W+ I KR + + +S ++ T+ +V K+K
Sbjct: 591 GKNNCSFQLVKKRIKSTKKAPSWRSIIKAFKKRENTRCNFLSSLHATTFREDIVVRPKIK 650
Query: 253 YF 258
F
Sbjct: 651 SF 652
>SPBC6B1.04 |mde4||monopolin-like complex subunit
Mde4|Schizosaccharomyces pombe|chr 2|||Manual
Length = 421
Score = 24.2 bits (50), Expect = 5.2
Identities = 16/43 (37%), Positives = 25/43 (58%), Gaps = 2/43 (4%)
Frame = +3
Query: 123 ERKQQMAKEYRVKVEKELREICYDV--LCLLDKHLIPKASNPE 245
E++Q A +YR+KVE+ +I V + L+ L + SNPE
Sbjct: 85 EQEQNEANDYRLKVERLEHKISDYVQEINSLNSQLQIQKSNPE 127
>SPBC21C3.05 |sap62||zinc finger protein Sap62|Schizosaccharomyces
pombe|chr 2|||Manual
Length = 217
Score = 23.8 bits (49), Expect = 6.8
Identities = 9/32 (28%), Positives = 19/32 (59%)
Frame = +3
Query: 42 VAYKNVVGARRSSWRVISSIEQKTEGSERKQQ 137
+ Y ++ + +R++S+ EQ+ E +RK Q
Sbjct: 142 IKYPDIEVNAKPRYRIMSAYEQRVEAPDRKFQ 173
>SPAC31G5.15 |||phosphatidylserine decarboxylase
|Schizosaccharomyces pombe|chr 1|||Manual
Length = 980
Score = 23.4 bits (48), Expect = 9.0
Identities = 13/31 (41%), Positives = 18/31 (58%), Gaps = 2/31 (6%)
Frame = +3
Query: 234 SNPESKVFYLKMKGDYYRYLAE--VATGETR 320
S S FY+K+K YR LA+ ++T E R
Sbjct: 59 SKKSSASFYMKLKYGSYRALADNILSTDENR 89
>SPAC6G9.04 |mug79||meiotically upregulated gene
Mug79|Schizosaccharomyces pombe|chr 1|||Manual
Length = 1318
Score = 23.4 bits (48), Expect = 9.0
Identities = 9/26 (34%), Positives = 15/26 (57%)
Frame = +3
Query: 201 CLLDKHLIPKASNPESKVFYLKMKGD 278
CL +L P ++ + VFYL + G+
Sbjct: 1108 CLASPNLPPSINSNRNNVFYLNIPGN 1133
>SPBC119.07 |ppk19||serine/threonine protein kinase
Ppk19|Schizosaccharomyces pombe|chr 2|||Manual
Length = 1706
Score = 23.4 bits (48), Expect = 9.0
Identities = 10/24 (41%), Positives = 15/24 (62%)
Frame = -3
Query: 182 FSELLFYFNPIFFCHLLFSFRPFG 111
F+ELL +P+F LFS++ G
Sbjct: 224 FAELLLEESPLFTLSQLFSYKAHG 247
>SPBC12C2.02c |ste20|ste16|sterility protein
Ste20|Schizosaccharomyces pombe|chr 2|||Manual
Length = 1309
Score = 23.4 bits (48), Expect = 9.0
Identities = 9/25 (36%), Positives = 17/25 (68%)
Frame = +3
Query: 102 EQKTEGSERKQQMAKEYRVKVEKEL 176
EQKT+GS R Q+ + ++K+ ++
Sbjct: 672 EQKTDGSFRGQRQVEHVKLKMGMQI 696
>SPAC17H9.06c |||conserved fungal protein|Schizosaccharomyces
pombe|chr 1|||Manual
Length = 601
Score = 23.4 bits (48), Expect = 9.0
Identities = 20/68 (29%), Positives = 32/68 (47%), Gaps = 6/68 (8%)
Frame = +3
Query: 84 RVISSIEQKTEGSERKQQMAKEYRVKVEKE-LREICYDVLCL--LDKHL---IPKASNPE 245
+V+SS + E S + + R E E L E+ +V L +D+ +P+ NP
Sbjct: 263 KVLSSSSEDDESSSPEDLLKPIIRSTEEMENLNELEQEVQDLDPIDEGFEEKVPRFRNPS 322
Query: 246 SKVFYLKM 269
K FY K+
Sbjct: 323 KKAFYEKL 330
Database: spombe
Posted date: Oct 4, 2007 10:57 AM
Number of letters in database: 2,362,478
Number of sequences in database: 5004
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 1,440,368
Number of Sequences: 5004
Number of extensions: 27845
Number of successful extensions: 99
Number of sequences better than 10.0: 27
Number of HSP's better than 10.0 without gapping: 96
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 97
length of database: 2,362,478
effective HSP length: 64
effective length of database: 2,042,222
effective search space used: 91899990
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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