BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= S06A01NCLL0023_K22
(331 letters)
Database: mosquito
2352 sequences; 563,979 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
AJ010299-1|CAA09070.1| 722|Anopheles gambiae stat protein. 25 0.56
EF595743-1|ABQ88369.1| 1893|Anopheles gambiae voltage-gated calc... 25 0.98
AJ439398-8|CAD28131.1| 1283|Anopheles gambiae putative different... 23 3.0
AJ441131-7|CAD29636.1| 1977|Anopheles gambiae putative Tyr/Ser/T... 23 3.9
AJ439398-6|CAD28129.1| 1978|Anopheles gambiae putative Tyr/Ser/T... 23 3.9
AF281078-2|AAF82132.1| 755|Anopheles gambiae vitellogenin 2 pro... 22 5.2
AF281078-1|AAF82131.1| 2051|Anopheles gambiae vitellogenin 1 pro... 22 5.2
Z69977-1|CAA93817.1| 151|Anopheles gambiae ribosomal protein RS... 22 6.9
AB090822-2|BAC57920.1| 1173|Anopheles gambiae reverse transcript... 22 6.9
AY347946-1|AAR28374.1| 640|Anopheles gambiae putative NPY GPCR ... 21 9.1
>AJ010299-1|CAA09070.1| 722|Anopheles gambiae stat protein.
Length = 722
Score = 25.4 bits (53), Expect = 0.56
Identities = 15/58 (25%), Positives = 25/58 (43%)
Frame = +3
Query: 81 WRVISSIEQKTEGSERKQQMAKEYRVKVEKELREICYDVLCLLDKHLIPKASNPESKV 254
W+V+ ++ + K + + +V K C V L+D LI K NP+ V
Sbjct: 274 WKVMKDVKDFIKLLLHKAFIVENQPPQVMKMNTRFCASVRLLIDNALIMKIGNPKVTV 331
>EF595743-1|ABQ88369.1| 1893|Anopheles gambiae voltage-gated calcium
channel alpha1 subunit protein.
Length = 1893
Score = 24.6 bits (51), Expect = 0.98
Identities = 9/25 (36%), Positives = 14/25 (56%)
Frame = -3
Query: 167 FYFNPIFFCHLLFSFRPFGFLFNRG 93
++F +F LL +GFLF+ G
Sbjct: 894 YFFTSVFTIELLLKLVSYGFLFHDG 918
>AJ439398-8|CAD28131.1| 1283|Anopheles gambiae putative
differentiation regulator protein.
Length = 1283
Score = 23.0 bits (47), Expect = 3.0
Identities = 10/27 (37%), Positives = 15/27 (55%)
Frame = +3
Query: 102 EQKTEGSERKQQMAKEYRVKVEKELRE 182
EQ+ K+Q KE R K E+E ++
Sbjct: 476 EQREREQREKEQREKEQREKEERERQQ 502
>AJ441131-7|CAD29636.1| 1977|Anopheles gambiae putative Tyr/Ser/Thr
phosphatase protein.
Length = 1977
Score = 22.6 bits (46), Expect = 3.9
Identities = 13/35 (37%), Positives = 20/35 (57%)
Frame = +3
Query: 111 TEGSERKQQMAKEYRVKVEKELREICYDVLCLLDK 215
+E + R QQ+ E+R++ E RE+ L LL K
Sbjct: 1396 SEQNLRLQQIVYEHRLREEALQRELYATRLALLKK 1430
>AJ439398-6|CAD28129.1| 1978|Anopheles gambiae putative Tyr/Ser/Thr
phosphatase protein.
Length = 1978
Score = 22.6 bits (46), Expect = 3.9
Identities = 13/35 (37%), Positives = 20/35 (57%)
Frame = +3
Query: 111 TEGSERKQQMAKEYRVKVEKELREICYDVLCLLDK 215
+E + R QQ+ E+R++ E RE+ L LL K
Sbjct: 1393 SEQNLRLQQIVYEHRLREEALQRELYATRLALLKK 1427
>AF281078-2|AAF82132.1| 755|Anopheles gambiae vitellogenin 2
protein.
Length = 755
Score = 22.2 bits (45), Expect = 5.2
Identities = 7/13 (53%), Positives = 10/13 (76%)
Frame = -3
Query: 131 FSFRPFGFLFNRG 93
FS +PFG +N+G
Sbjct: 121 FSSKPFGIYYNKG 133
>AF281078-1|AAF82131.1| 2051|Anopheles gambiae vitellogenin 1
protein.
Length = 2051
Score = 22.2 bits (45), Expect = 5.2
Identities = 7/13 (53%), Positives = 10/13 (76%)
Frame = -3
Query: 131 FSFRPFGFLFNRG 93
FS +PFG +N+G
Sbjct: 121 FSSKPFGIYYNKG 133
>Z69977-1|CAA93817.1| 151|Anopheles gambiae ribosomal protein RS11
protein.
Length = 151
Score = 21.8 bits (44), Expect = 6.9
Identities = 12/27 (44%), Positives = 14/27 (51%)
Frame = +1
Query: 100 LNRKPKGRKENNRWQKNIGLK*KRSSE 180
LNRK RK+ R +IGL K E
Sbjct: 18 LNRKNVSRKKGLRMHHSIGLGFKTPKE 44
>AB090822-2|BAC57920.1| 1173|Anopheles gambiae reverse transcriptase
protein.
Length = 1173
Score = 21.8 bits (44), Expect = 6.9
Identities = 9/22 (40%), Positives = 13/22 (59%)
Frame = +1
Query: 79 HGESFPLLNRKPKGRKENNRWQ 144
H +S P RKP+ R+ RW+
Sbjct: 232 HRQS-PAHRRKPRWRRAGRRWK 252
>AY347946-1|AAR28374.1| 640|Anopheles gambiae putative NPY GPCR
protein.
Length = 640
Score = 21.4 bits (43), Expect = 9.1
Identities = 8/19 (42%), Positives = 13/19 (68%)
Frame = -3
Query: 161 FNPIFFCHLLFSFRPFGFL 105
+NPI +C++ FR GF+
Sbjct: 562 YNPIIYCYMNARFRS-GFI 579
Database: mosquito
Posted date: Oct 23, 2007 1:18 PM
Number of letters in database: 563,979
Number of sequences in database: 2352
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 352,011
Number of Sequences: 2352
Number of extensions: 6516
Number of successful extensions: 16
Number of sequences better than 10.0: 10
Number of HSP's better than 10.0 without gapping: 15
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 16
length of database: 563,979
effective HSP length: 56
effective length of database: 432,267
effective search space used: 22910151
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
- SilkBase 1999-2023 -