Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= S06A01NCLL0023_K22
(331 letters)
Database: bee
438 sequences; 146,343 total letters
Searching......................................................done
Score E
Sequences producing significant alignments: (bits) Value
AB264313-1|BAF43600.1| 900|Apis mellifera ecdysone-induced prot... 23 0.96
AY268031-1|AAP23056.1| 810|Apis mellifera dorsal protein splice... 23 1.3
DQ855484-1|ABH88171.1| 130|Apis mellifera chemosensory protein ... 21 3.9
AF481963-1|AAN59784.1| 130|Apis mellifera antennal-specific pro... 21 3.9
AY500239-1|AAR92109.1| 555|Apis mellifera neuronal nicotinic ac... 20 6.7
EF127805-1|ABL67942.1| 461|Apis mellifera nicotinic acetylcholi... 20 8.9
EF127804-1|ABL67941.1| 461|Apis mellifera nicotinic acetylcholi... 20 8.9
EF127803-1|ABL67940.1| 461|Apis mellifera nicotinic acetylcholi... 20 8.9
EF127802-1|ABL67939.1| 461|Apis mellifera nicotinic acetylcholi... 20 8.9
EF127801-1|ABL67938.1| 461|Apis mellifera nicotinic acetylcholi... 20 8.9
EF127800-1|ABL67937.1| 461|Apis mellifera nicotinic acetylcholi... 20 8.9
DQ026036-1|AAY87895.1| 529|Apis mellifera nicotinic acetylcholi... 20 8.9
DQ026035-1|AAY87894.1| 529|Apis mellifera nicotinic acetylcholi... 20 8.9
AF023666-1|AAC14552.1| 363|Apis mellifera sn-glycerol-3-phospha... 20 8.9
>AB264313-1|BAF43600.1| 900|Apis mellifera ecdysone-induced protein
75 protein.
Length = 900
Score = 23.0 bits (47), Expect = 0.96
Identities = 12/30 (40%), Positives = 14/30 (46%)
Frame = +1
Query: 67 PDGHHGESFPLLNRKPKGRKENNRWQKNIG 156
P GHH S PLL G +R + N G
Sbjct: 516 PSGHHASSAPLLAATLAGGLCPHRRRANSG 545
>AY268031-1|AAP23056.1| 810|Apis mellifera dorsal protein splice
variant B protein.
Length = 810
Score = 22.6 bits (46), Expect = 1.3
Identities = 13/63 (20%), Positives = 32/63 (50%)
Frame = +3
Query: 102 EQKTEGSERKQQMAKEYRVKVEKELREICYDVLCLLDKHLIPKASNPESKVFYLKMKGDY 281
E++T +E+ +M K Y ++KE +++ ++ + + A ++ + K K D+
Sbjct: 441 EKRTIENEQLNRMYKSYPNYIDKETKDMNLEISTRPKSNTVENACVLKNTEIF-KDKSDW 499
Query: 282 YRY 290
+ Y
Sbjct: 500 FDY 502
>DQ855484-1|ABH88171.1| 130|Apis mellifera chemosensory protein 3
protein.
Length = 130
Score = 21.0 bits (42), Expect = 3.9
Identities = 8/18 (44%), Positives = 14/18 (77%)
Frame = +3
Query: 144 KEYRVKVEKELREICYDV 197
K+YRVK E+E +++ +V
Sbjct: 113 KKYRVKFEEEAKKLGINV 130
>AF481963-1|AAN59784.1| 130|Apis mellifera antennal-specific
protein 3c precursor protein.
Length = 130
Score = 21.0 bits (42), Expect = 3.9
Identities = 8/18 (44%), Positives = 14/18 (77%)
Frame = +3
Query: 144 KEYRVKVEKELREICYDV 197
K+YRVK E+E +++ +V
Sbjct: 113 KKYRVKFEEEAKKLGINV 130
>AY500239-1|AAR92109.1| 555|Apis mellifera neuronal nicotinic
acetylcholine receptoralpha7-1 protein.
Length = 555
Score = 20.2 bits (40), Expect = 6.7
Identities = 9/22 (40%), Positives = 12/22 (54%)
Frame = -3
Query: 173 LLFYFNPIFFCHLLFSFRPFGF 108
L ++FN I C L+ S GF
Sbjct: 232 LYYFFNLIVPCVLIASMAVLGF 253
>EF127805-1|ABL67942.1| 461|Apis mellifera nicotinic acetylcholine
receptor subunitalpha 6 transcript variant 6 protein.
Length = 461
Score = 19.8 bits (39), Expect = 8.9
Identities = 9/22 (40%), Positives = 12/22 (54%)
Frame = -3
Query: 173 LLFYFNPIFFCHLLFSFRPFGF 108
L ++FN I C L+ S GF
Sbjct: 195 LYYFFNLIVPCVLISSMALLGF 216
>EF127804-1|ABL67941.1| 461|Apis mellifera nicotinic acetylcholine
receptor subunitalpha 6 transcript variant 5 protein.
Length = 461
Score = 19.8 bits (39), Expect = 8.9
Identities = 9/22 (40%), Positives = 12/22 (54%)
Frame = -3
Query: 173 LLFYFNPIFFCHLLFSFRPFGF 108
L ++FN I C L+ S GF
Sbjct: 195 LYYFFNLIVPCVLISSMALLGF 216
>EF127803-1|ABL67940.1| 461|Apis mellifera nicotinic acetylcholine
receptor subunitalpha 6 transcript variant 4 protein.
Length = 461
Score = 19.8 bits (39), Expect = 8.9
Identities = 9/22 (40%), Positives = 12/22 (54%)
Frame = -3
Query: 173 LLFYFNPIFFCHLLFSFRPFGF 108
L ++FN I C L+ S GF
Sbjct: 195 LYYFFNLIVPCVLISSMALLGF 216
>EF127802-1|ABL67939.1| 461|Apis mellifera nicotinic acetylcholine
receptor subunitalpha 6 transcript variant 3 protein.
Length = 461
Score = 19.8 bits (39), Expect = 8.9
Identities = 9/22 (40%), Positives = 12/22 (54%)
Frame = -3
Query: 173 LLFYFNPIFFCHLLFSFRPFGF 108
L ++FN I C L+ S GF
Sbjct: 195 LYYFFNLIVPCVLISSMALLGF 216
>EF127801-1|ABL67938.1| 461|Apis mellifera nicotinic acetylcholine
receptor subunitalpha 6 transcript variant 2 protein.
Length = 461
Score = 19.8 bits (39), Expect = 8.9
Identities = 9/22 (40%), Positives = 12/22 (54%)
Frame = -3
Query: 173 LLFYFNPIFFCHLLFSFRPFGF 108
L ++FN I C L+ S GF
Sbjct: 195 LYYFFNLIVPCVLISSMALLGF 216
>EF127800-1|ABL67937.1| 461|Apis mellifera nicotinic acetylcholine
receptor subunitalpha 6 transcript variant 1 protein.
Length = 461
Score = 19.8 bits (39), Expect = 8.9
Identities = 9/22 (40%), Positives = 12/22 (54%)
Frame = -3
Query: 173 LLFYFNPIFFCHLLFSFRPFGF 108
L ++FN I C L+ S GF
Sbjct: 195 LYYFFNLIVPCVLISSMALLGF 216
>DQ026036-1|AAY87895.1| 529|Apis mellifera nicotinic acetylcholine
receptor alpha6subunit protein.
Length = 529
Score = 19.8 bits (39), Expect = 8.9
Identities = 9/22 (40%), Positives = 12/22 (54%)
Frame = -3
Query: 173 LLFYFNPIFFCHLLFSFRPFGF 108
L ++FN I C L+ S GF
Sbjct: 263 LYYFFNLIVPCVLISSMALLGF 284
>DQ026035-1|AAY87894.1| 529|Apis mellifera nicotinic acetylcholine
receptor alpha6subunit protein.
Length = 529
Score = 19.8 bits (39), Expect = 8.9
Identities = 9/22 (40%), Positives = 12/22 (54%)
Frame = -3
Query: 173 LLFYFNPIFFCHLLFSFRPFGF 108
L ++FN I C L+ S GF
Sbjct: 263 LYYFFNLIVPCVLISSMALLGF 284
>AF023666-1|AAC14552.1| 363|Apis mellifera sn-glycerol-3-phosphate
dehydrogenase protein.
Length = 363
Score = 19.8 bits (39), Expect = 8.9
Identities = 7/13 (53%), Positives = 9/13 (69%)
Frame = -3
Query: 59 HIFISNGKKVSFF 21
+IF GKK +FF
Sbjct: 242 NIFFPGGKKTTFF 254
Database: bee
Posted date: Oct 23, 2007 1:17 PM
Number of letters in database: 146,343
Number of sequences in database: 438
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 94,857
Number of Sequences: 438
Number of extensions: 1809
Number of successful extensions: 14
Number of sequences better than 10.0: 14
Number of HSP's better than 10.0 without gapping: 14
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 14
length of database: 146,343
effective HSP length: 50
effective length of database: 124,443
effective search space used: 7342137
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 39 (20.8 bits)
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