Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= S06A01NCLL0023_K18
(298 letters)
Database: rice
37,544 sequences; 14,793,348 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
10_05_0072 + 8839223-8839720 29 0.49
06_01_0715 - 5193648-5193897,5193987-5194255,5195011-5195350,519... 28 1.1
03_03_0008 - 13674602-13674708,13675272-13675439,13676169-136767... 28 1.1
02_03_0307 + 17546263-17546299,17546522-17548018,17548859-175489... 27 2.0
01_07_0337 + 42838260-42838344,42838972-42839084,42839652-428397... 27 2.0
11_06_0610 - 25449085-25453284 27 2.6
03_02_0270 - 7011363-7012302,7013237-7013640,7014264-7014333,701... 27 2.6
07_03_1008 - 23271680-23273045,23273123-23273568 27 3.5
05_05_0392 + 24629528-24630442 27 3.5
08_02_0950 + 22964817-22964952,22965091-22965493,22966351-22967413 26 4.6
05_03_0394 - 13440871-13441098,13441197-13441394,13441491-134415... 26 4.6
03_05_0062 + 20370608-20370977,20371062-20371541,20371661-203717... 26 4.6
12_01_0467 + 3657320-3657992,3658077-3658342 26 6.0
09_04_0746 - 19888479-19888622,19888739-19888867,19889061-198895... 26 6.0
08_02_1569 - 27924930-27925034,27925149-27925167,27925271-279254... 26 6.0
07_01_0277 - 2038757-2039542 26 6.0
05_05_0233 + 23496405-23496932,23497346-23497621,23497747-23497938 26 6.0
05_02_0081 + 6432957-6433289,6433367-6433882,6434283-6434570 26 6.0
04_03_0937 + 20923705-20923833,20924001-20924012,20924413-209244... 26 6.0
07_01_0805 + 6295448-6296264,6296362-6297479,6297565-6298467 25 8.0
05_01_0492 - 4102379-4103494,4104105-4104383,4105395-4105724 25 8.0
03_01_0067 - 538929-539143,539306-539344,539579-539635,539727-53... 25 8.0
01_03_0002 - 11506135-11506783,11506815-11506912 25 8.0
01_01_0487 - 3591171-3592313,3593522-3593800,3594688-3595008 25 8.0
>10_05_0072 + 8839223-8839720
Length = 165
Score = 29.5 bits (63), Expect = 0.49
Identities = 13/37 (35%), Positives = 15/37 (40%)
Frame = +3
Query: 18 GKTSSGPPPPVYGDRVLRKTKSSTPSDERAPPVNNTG 128
G + PPPP GD K + P E AP G
Sbjct: 79 GSGGAAPPPPAAGDAAAPKPAAEEPPKEPAPAEKEEG 115
>06_01_0715 -
5193648-5193897,5193987-5194255,5195011-5195350,
5195691-5195845,5196547-5196557,5197632-5197689,
5197855-5198004,5198074-5198169,5198398-5198818,
5198835-5198950,5199041-5199149,5199483-5199532,
5200936-5201004,5201366-5201459,5201550-5201820,
5202273-5202607,5202718-5202786,5202834-5202904
Length = 977
Score = 28.3 bits (60), Expect = 1.1
Identities = 16/35 (45%), Positives = 21/35 (60%), Gaps = 1/35 (2%)
Frame = +1
Query: 13 TTAKHLQDLLHQCTEIEF-SAKRNHLHRPMRGLHL 114
+T K LQDLL QC IE+ S R H+ ++ L L
Sbjct: 505 STQKDLQDLLSQCFNIEWLSLVRCHIGGEIKSLSL 539
>03_03_0008 - 13674602-13674708,13675272-13675439,13676169-13676787,
13676868-13677330,13677855-13678036,13678093-13678235,
13678315-13678423,13679000-13679456,13680490-13682473,
13682507-13682626,13682920-13682971
Length = 1467
Score = 28.3 bits (60), Expect = 1.1
Identities = 14/41 (34%), Positives = 22/41 (53%), Gaps = 1/41 (2%)
Frame = +3
Query: 12 YYGKTSSGPPPPVYGDRVLRKTKSSTPS-DERAPPVNNTGG 131
+YG+ S PP P G + ++ + +PS PPV + GG
Sbjct: 1393 HYGRPSDPPPGPCSGWSMPPRSSNYSPSRHSMEPPVPHVGG 1433
>02_03_0307 +
17546263-17546299,17546522-17548018,17548859-17548949,
17549054-17549621,17550591-17550670,17550993-17551077,
17551172-17551263,17551355-17551423,17551587-17551655,
17552217-17552510,17552761-17552797,17552883-17552972,
17553520-17553585,17553704-17553818,17553902-17553940,
17554519-17554700
Length = 1136
Score = 27.5 bits (58), Expect = 2.0
Identities = 13/35 (37%), Positives = 19/35 (54%)
Frame = +3
Query: 24 TSSGPPPPVYGDRVLRKTKSSTPSDERAPPVNNTG 128
T S PP GD+V+++ S+ S PPV+ G
Sbjct: 122 TVSPPPVSECGDKVVQQESSNQESTVSPPPVSECG 156
>01_07_0337 +
42838260-42838344,42838972-42839084,42839652-42839729,
42839831-42840054,42840084-42840128,42840156-42840264
Length = 217
Score = 27.5 bits (58), Expect = 2.0
Identities = 13/42 (30%), Positives = 19/42 (45%)
Frame = +3
Query: 48 VYGDRVLRKTKSSTPSDERAPPVNNTGGYFKGIADWSQRRAT 173
V +L++ K S PS P NN+ YF+G + T
Sbjct: 85 VQHSHLLKRRKPSRPSSSWPTPSNNSDPYFEGPPQYMMNNRT 126
>11_06_0610 - 25449085-25453284
Length = 1399
Score = 27.1 bits (57), Expect = 2.6
Identities = 13/33 (39%), Positives = 18/33 (54%)
Frame = +3
Query: 27 SSGPPPPVYGDRVLRKTKSSTPSDERAPPVNNT 125
+S PPPP KSS P +E++PP+ T
Sbjct: 724 ASSPPPPAPEGHTPSPPKSSPP-EEKSPPIPPT 755
Score = 25.4 bits (53), Expect = 8.0
Identities = 13/29 (44%), Positives = 16/29 (55%)
Frame = +3
Query: 27 SSGPPPPVYGDRVLRKTKSSTPSDERAPP 113
SS PPPP + KS TP E++PP
Sbjct: 691 SSSPPPPAPEGHMPSPPKS-TPPVEKSPP 718
>03_02_0270 -
7011363-7012302,7013237-7013640,7014264-7014333,
7014835-7015331,7015959-7016283,7018060-7018292
Length = 822
Score = 27.1 bits (57), Expect = 2.6
Identities = 14/43 (32%), Positives = 22/43 (51%)
Frame = +3
Query: 36 PPPPVYGDRVLRKTKSSTPSDERAPPVNNTGGYFKGIADWSQR 164
P P V+GDR + TK+ST S + G+ +G+ + R
Sbjct: 652 PTPMVFGDRPVVVTKNSTYSANNITEFLDAIGFTEGVQPYVTR 694
>07_03_1008 - 23271680-23273045,23273123-23273568
Length = 603
Score = 26.6 bits (56), Expect = 3.5
Identities = 10/20 (50%), Positives = 14/20 (70%)
Frame = -3
Query: 176 FSGSPLRPICDPFEIATRII 117
F G LRP+CDP E++ I+
Sbjct: 346 FFGINLRPVCDPSEVSYTIM 365
>05_05_0392 + 24629528-24630442
Length = 304
Score = 26.6 bits (56), Expect = 3.5
Identities = 18/54 (33%), Positives = 25/54 (46%), Gaps = 4/54 (7%)
Frame = +3
Query: 18 GKTSSGPPPPVYGDRVLRKT-KSSTPSDERAPPVNNT---GGYFKGIADWSQRR 167
G+ S PPPP + R T +S +P+ +R P T G G A QR+
Sbjct: 169 GRASPSPPPPPRREPGERPTRRSPSPATKRPPDQRRTAASAGAAAGAASGPQRK 222
>08_02_0950 + 22964817-22964952,22965091-22965493,22966351-22967413
Length = 533
Score = 26.2 bits (55), Expect = 4.6
Identities = 14/37 (37%), Positives = 17/37 (45%)
Frame = -1
Query: 127 PVLFTGGALSSDGVDDFVLRRTLSPYTGGGGPEDVLP 17
P + A S+ D V+ P TGGGGP V P
Sbjct: 231 PASLSRTASSASPSSDLVVSPVAWPATGGGGPAMVSP 267
>05_03_0394 -
13440871-13441098,13441197-13441394,13441491-13441594,
13441687-13442551,13442677-13443045,13443372-13443533,
13443838-13444056,13444138-13444656,13444742-13444819,
13446041-13446163
Length = 954
Score = 26.2 bits (55), Expect = 4.6
Identities = 13/37 (35%), Positives = 17/37 (45%)
Frame = +3
Query: 18 GKTSSGPPPPVYGDRVLRKTKSSTPSDERAPPVNNTG 128
G+ +S PPPP R+ + TPS E A G
Sbjct: 8 GEEASAPPPPPPRRGEKRRMRGRTPSPEPASAPQTNG 44
>03_05_0062 +
20370608-20370977,20371062-20371541,20371661-20371731,
20371836-20371912,20372076-20372223,20372346-20372507,
20372743-20372940
Length = 501
Score = 26.2 bits (55), Expect = 4.6
Identities = 10/32 (31%), Positives = 17/32 (53%)
Frame = +3
Query: 36 PPPPVYGDRVLRKTKSSTPSDERAPPVNNTGG 131
PPPP G+ ++ + +T ++PP T G
Sbjct: 24 PPPPPGGNSMIMPSSLTTAGTSQSPPDATTAG 55
>12_01_0467 + 3657320-3657992,3658077-3658342
Length = 312
Score = 25.8 bits (54), Expect = 6.0
Identities = 15/38 (39%), Positives = 20/38 (52%)
Frame = +3
Query: 9 GYYGKTSSGPPPPVYGDRVLRKTKSSTPSDERAPPVNN 122
G G T P VY +R+LR+T TP D A +N+
Sbjct: 89 GKLGTTEGFKPFHVYLNRILRRT--LTPKDGNASNINH 124
>09_04_0746 -
19888479-19888622,19888739-19888867,19889061-19889548,
19889666-19889843,19889920-19889991,19890993-19891193
Length = 403
Score = 25.8 bits (54), Expect = 6.0
Identities = 10/30 (33%), Positives = 17/30 (56%)
Frame = +3
Query: 15 YGKTSSGPPPPVYGDRVLRKTKSSTPSDER 104
+ T++G PPP D ++ +K P D+R
Sbjct: 49 FSSTTTGDPPPPTMDSPIKVSKIILPMDDR 78
>08_02_1569 -
27924930-27925034,27925149-27925167,27925271-27925490,
27925925-27925971,27926502-27927025
Length = 304
Score = 25.8 bits (54), Expect = 6.0
Identities = 17/45 (37%), Positives = 22/45 (48%)
Frame = +3
Query: 9 GYYGKTSSGPPPPVYGDRVLRKTKSSTPSDERAPPVNNTGGYFKG 143
G YG T S PP YG ++TPS APP +++ Y G
Sbjct: 10 GGYGSTPSAPPASSYG-------YTTTPS---APPASSSSSYGYG 44
>07_01_0277 - 2038757-2039542
Length = 261
Score = 25.8 bits (54), Expect = 6.0
Identities = 11/29 (37%), Positives = 16/29 (55%)
Frame = +3
Query: 36 PPPPVYGDRVLRKTKSSTPSDERAPPVNN 122
PPPP+ GD + K E +PP+N+
Sbjct: 136 PPPPIDGDAAAAEEK----EPEHSPPINS 160
>05_05_0233 +
23496405-23496932,23497346-23497621,23497747-23497938
Length = 331
Score = 25.8 bits (54), Expect = 6.0
Identities = 11/21 (52%), Positives = 14/21 (66%)
Frame = -2
Query: 63 LYLRTLVEEVLKMFCRSNPSC 1
LYL+ LV+E +M CR N C
Sbjct: 5 LYLQRLVQEDWRMTCRRNRFC 25
>05_02_0081 + 6432957-6433289,6433367-6433882,6434283-6434570
Length = 378
Score = 25.8 bits (54), Expect = 6.0
Identities = 12/32 (37%), Positives = 13/32 (40%)
Frame = +3
Query: 36 PPPPVYGDRVLRKTKSSTPSDERAPPVNNTGG 131
PPPP + D T T RAP GG
Sbjct: 221 PPPPRHTDTATVTTPPPTKRSPRAPAFGGQGG 252
>04_03_0937 +
20923705-20923833,20924001-20924012,20924413-20924473,
20924523-20924749,20924859-20925104,20925645-20925657,
20927681-20928302,20928320-20928949,20928960-20929224
Length = 734
Score = 25.8 bits (54), Expect = 6.0
Identities = 11/19 (57%), Positives = 12/19 (63%)
Frame = +3
Query: 6 RGYYGKTSSGPPPPVYGDR 62
R +G TSS PPPP G R
Sbjct: 512 RWSWGSTSSPPPPPFGGGR 530
>07_01_0805 + 6295448-6296264,6296362-6297479,6297565-6298467
Length = 945
Score = 25.4 bits (53), Expect = 8.0
Identities = 11/27 (40%), Positives = 15/27 (55%)
Frame = +3
Query: 18 GKTSSGPPPPVYGDRVLRKTKSSTPSD 98
G + + PPP V D +KT SS P +
Sbjct: 398 GDSKTVPPPTVLADLKRKKTASSPPPE 424
>05_01_0492 - 4102379-4103494,4104105-4104383,4105395-4105724
Length = 574
Score = 25.4 bits (53), Expect = 8.0
Identities = 13/38 (34%), Positives = 15/38 (39%)
Frame = +3
Query: 15 YGKTSSGPPPPVYGDRVLRKTKSSTPSDERAPPVNNTG 128
Y SGP PP YG + + PP NTG
Sbjct: 409 YVPPPSGPAPPFYGPNPGMYEPPAVRPNSGPPPSYNTG 446
>03_01_0067 -
538929-539143,539306-539344,539579-539635,539727-539875,
540298-540365,542009-542093,542185-542246,542612-542700,
543034-543088,544127-544252,544477-544576,544697-545499
Length = 615
Score = 25.4 bits (53), Expect = 8.0
Identities = 13/45 (28%), Positives = 18/45 (40%)
Frame = +3
Query: 12 YYGKTSSGPPPPVYGDRVLRKTKSSTPSDERAPPVNNTGGYFKGI 146
+ G S+ PPPP G V + PP +N G G+
Sbjct: 64 FIGDLSAQPPPPTPGGSVKAAPQFIGDDVSAQPPYHNGAGEGSGL 108
>01_03_0002 - 11506135-11506783,11506815-11506912
Length = 248
Score = 25.4 bits (53), Expect = 8.0
Identities = 17/48 (35%), Positives = 24/48 (50%), Gaps = 1/48 (2%)
Frame = +3
Query: 18 GKTSSGPPPPVYGDRVLRKTKSSTPSDERAPPVNNTGG-YFKGIADWS 158
G+ G P PV+GD V +K ++ A V TGG + KG + S
Sbjct: 193 GRRRKGRPAPVHGD-VFQK-GGDIEGEKEAAAVTATGGDFLKGAEERS 238
>01_01_0487 - 3591171-3592313,3593522-3593800,3594688-3595008
Length = 580
Score = 25.4 bits (53), Expect = 8.0
Identities = 13/40 (32%), Positives = 14/40 (35%)
Frame = +3
Query: 15 YGKTSSGPPPPVYGDRVLRKTKSSTPSDERAPPVNNTGGY 134
Y SGP PP YG + PP GGY
Sbjct: 410 YMPPPSGPAPPFYGQNQSMYEPPVGRPNSGPPPSYGAGGY 449
Database: rice
Posted date: Oct 4, 2007 10:57 AM
Number of letters in database: 14,793,348
Number of sequences in database: 37,544
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 8,312,608
Number of Sequences: 37544
Number of extensions: 163015
Number of successful extensions: 639
Number of sequences better than 10.0: 24
Number of HSP's better than 10.0 without gapping: 600
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 636
length of database: 14,793,348
effective HSP length: 71
effective length of database: 12,127,724
effective search space used: 327448548
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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