Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= S06A01NCLL0023_K17
(284 letters)
Database: rice
37,544 sequences; 14,793,348 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
11_06_0031 + 19425011-19425113,19425552-19425637,19425732-194258... 110 2e-25
02_02_0464 - 10552347-10552466,10552683-10552928,10553866-105541... 88 1e-18
08_02_0669 + 19868149-19870179 29 0.58
03_03_0135 + 14748712-14748718,14748807-14748873,14748962-147490... 28 1.0
11_06_0147 - 20626854-20627181,20627267-20627377,20627461-206278... 27 2.3
07_03_0552 + 19383475-19383559,19383807-19385129,19385211-19385299 27 3.1
04_04_1264 - 32227812-32228114,32228199-32228349,32228454-322286... 27 3.1
02_05_1217 + 34999631-34999945,35000670-35000835,35001908-350020... 27 3.1
02_02_0025 + 6183328-6186127,6186265-6186623 27 3.1
08_01_0017 + 132109-132924 26 4.1
06_01_0144 + 1089090-1091390 26 4.1
04_01_0002 - 73522-74064 26 4.1
01_06_1123 + 34671365-34671883,34672366-34672625,34673045-346731... 26 4.1
08_01_0090 - 649631-651162,653189-655019,655313-655365,655731-65... 26 5.4
07_01_0250 - 1864990-1865005,1865429-1865502,1865588-1865659,186... 25 7.1
04_04_1176 + 31494318-31495685 25 7.1
08_01_0397 - 3509186-3510291,3510322-3512335 25 9.4
07_01_0467 - 3524598-3524837,3524939-3525466,3526242-3526892,352... 25 9.4
06_02_0066 - 11081446-11081544,11081639-11081846,11083122-110832... 25 9.4
01_06_1466 + 37559600-37559795,37560597-37560730,37561252-375614... 25 9.4
>11_06_0031 +
19425011-19425113,19425552-19425637,19425732-19425829,
19425950-19426067,19426200-19426289,19426770-19427074,
19427162-19427357,19427435-19427617,19427713-19427982,
19428906-19429151,19429633-19429704,19430087-19430104
Length = 594
Score = 110 bits (264), Expect = 2e-25
Identities = 48/61 (78%), Positives = 55/61 (90%)
Frame = +3
Query: 102 DKLTRIAIVNADRCKPKRCRQECKKSCPVVRMGKLCIEVTPNDKIATISEELCIGCGIGV 281
++LTRIAIV+ D+CKPK+CRQECKKSCPVV+ GKLCIEVTP K+A ISEELCIGCGI V
Sbjct: 3 ERLTRIAIVSEDKCKPKKCRQECKKSCPVVKTGKLCIEVTPASKLAFISEELCIGCGICV 62
Query: 282 K 284
K
Sbjct: 63 K 63
>02_02_0464 -
10552347-10552466,10552683-10552928,10553866-10554135,
10554231-10554413,10554493-10554688,10554775-10555079,
10555515-10555604,10555689-10555806,10555991-10556088,
10556187-10556272,10557622-10557736
Length = 608
Score = 87.8 bits (208), Expect = 1e-18
Identities = 35/65 (53%), Positives = 49/65 (75%)
Frame = +3
Query: 90 NEETDKLTRIAIVNADRCKPKRCRQECKKSCPVVRMGKLCIEVTPNDKIATISEELCIGC 269
+ + + +RIA+V DRC+P +C Q+C+K CPV G+ CIEVTP+ +++ ISEELCIGC
Sbjct: 3 SSSSGRSSRIAVVTEDRCRPSKCGQQCRKRCPVNATGRQCIEVTPSSRVSLISEELCIGC 62
Query: 270 GIGVK 284
GI VK
Sbjct: 63 GICVK 67
>08_02_0669 + 19868149-19870179
Length = 676
Score = 29.1 bits (62), Expect = 0.58
Identities = 17/61 (27%), Positives = 27/61 (44%)
Frame = +3
Query: 99 TDKLTRIAIVNADRCKPKRCRQECKKSCPVVRMGKLCIEVTPNDKIATISEELCIGCGIG 278
TD +T DR KR + ++CPV +V PN + I E+L + G+
Sbjct: 283 TDPVTLATGQTYDRASIKRWVKSGCRTCPVTGEKLRSADVVPNVAVRGIVEQLLLSSGVS 342
Query: 279 V 281
+
Sbjct: 343 L 343
>03_03_0135 +
14748712-14748718,14748807-14748873,14748962-14749076,
14749179-14749382,14749614-14749742,14749822-14749989,
14750648-14750808,14751490-14751580,14752277-14752436,
14752782-14752815,14753122-14753211,14754780-14754893,
14755000-14755123,14755652-14755762,14756378-14756478,
14756571-14756703
Length = 602
Score = 28.3 bits (60), Expect = 1.0
Identities = 11/24 (45%), Positives = 18/24 (75%)
Frame = -2
Query: 280 TPIPHPIHSSSEMVAILSLGVTSM 209
+P+PH +HS+S+MV+ +TSM
Sbjct: 98 SPVPHLLHSASDMVSTKLAVLTSM 121
>11_06_0147 -
20626854-20627181,20627267-20627377,20627461-20627846,
20627949-20628057,20629375-20629421,20629506-20629646
Length = 373
Score = 27.1 bits (57), Expect = 2.3
Identities = 15/39 (38%), Positives = 21/39 (53%), Gaps = 1/39 (2%)
Frame = -2
Query: 268 HPIHSSSEMVAILSL-GVTSMHSLPIRTTGQLFLHSCRH 155
HP S+ V+ S+ G S P+ TTG+L LH+ H
Sbjct: 153 HPNMPSAGSVSSSSVQGEVDNESSPVHTTGELSLHANTH 191
>07_03_0552 + 19383475-19383559,19383807-19385129,19385211-19385299
Length = 498
Score = 26.6 bits (56), Expect = 3.1
Identities = 12/23 (52%), Positives = 13/23 (56%)
Frame = -2
Query: 199 PIRTTGQLFLHSCRHLFGLQRSA 131
PI T LF+H C L G RSA
Sbjct: 469 PILTVFDLFIHVCLELEGFSRSA 491
>04_04_1264 -
32227812-32228114,32228199-32228349,32228454-32228691,
32228786-32228996,32229077-32229270,32229334-32229450,
32229580-32230522
Length = 718
Score = 26.6 bits (56), Expect = 3.1
Identities = 14/47 (29%), Positives = 24/47 (51%)
Frame = -3
Query: 141 NDPHLL*RYG*VYLFPHYLVFGTSLIKERTLAILCLRSRVLSSCRIT 1
N H++ YG Y+ P Y + G +K T + L ++S C+I+
Sbjct: 560 NTKHVVGTYG--YMSPEYAMEGIFSVKSDTYSFGVLVLELISGCKIS 604
>02_05_1217 +
34999631-34999945,35000670-35000835,35001908-35002005,
35002245-35002319,35002413-35002481,35002552-35002637,
35002710-35002827,35003575-35003902,35003995-35005682,
35005822-35005881,35005953-35006027,35006105-35006197,
35006298-35006372,35006464-35006532,35006614-35006682,
35006994-35007113
Length = 1167
Score = 26.6 bits (56), Expect = 3.1
Identities = 12/35 (34%), Positives = 17/35 (48%)
Frame = +3
Query: 156 CRQECKKSCPVVRMGKLCIEVTPNDKIATISEELC 260
C +E ++C V R+ IE NDK A + C
Sbjct: 238 CIKEMLRNCKVARILPKIIEFAKNDKSAVLRARCC 272
>02_02_0025 + 6183328-6186127,6186265-6186623
Length = 1052
Score = 26.6 bits (56), Expect = 3.1
Identities = 10/26 (38%), Positives = 18/26 (69%), Gaps = 2/26 (7%)
Frame = +3
Query: 165 ECKKSC--PVVRMGKLCIEVTPNDKI 236
E +SC P+V++G LC ++P D++
Sbjct: 1007 EIMQSCIIPMVKLGLLCSSISPKDRL 1032
>08_01_0017 + 132109-132924
Length = 271
Score = 26.2 bits (55), Expect = 4.1
Identities = 9/32 (28%), Positives = 16/32 (50%)
Frame = +2
Query: 113 PYRYSKCGSLQTKKMSTGMQEELPSCAYGQTV 208
PY YS C ++ + + + PSC +T+
Sbjct: 36 PYSYSSCSNMSSSSSAAAAAWQWPSCKQPRTL 67
>06_01_0144 + 1089090-1091390
Length = 766
Score = 26.2 bits (55), Expect = 4.1
Identities = 12/31 (38%), Positives = 16/31 (51%)
Frame = -3
Query: 234 FYHWVLLRCTVCPYAQLGNSSCIPVDIFLVC 142
+YH VL PY + N C PV +F +C
Sbjct: 351 YYHSVLPVVLASPYFFVVNYLCFPVVVFGLC 381
>04_01_0002 - 73522-74064
Length = 180
Score = 26.2 bits (55), Expect = 4.1
Identities = 10/26 (38%), Positives = 15/26 (57%)
Frame = -1
Query: 83 FSGHH**KSERWRYFAYVRVSFPRAE 6
F H + ERW Y+ V+++ PR E
Sbjct: 40 FYSHAYQRGERWEYYMTVKINPPRGE 65
>01_06_1123 +
34671365-34671883,34672366-34672625,34673045-34673143,
34673237-34675178,34675588-34675658,34676158-34676307,
34676963-34677038,34677131-34677232,34677707-34677855,
34678214-34678364
Length = 1172
Score = 26.2 bits (55), Expect = 4.1
Identities = 11/26 (42%), Positives = 14/26 (53%)
Frame = +2
Query: 119 RYSKCGSLQTKKMSTGMQEELPSCAY 196
R +C + KKM TG + E P C Y
Sbjct: 271 RCLECNEHRPKKMLTGGEWECPQCVY 296
>08_01_0090 -
649631-651162,653189-655019,655313-655365,655731-655735,
656209-656411,656837-657292,657718-657805,657917-658017,
658404-658631,659128-659445,659528-659812,660148-660711
Length = 1887
Score = 25.8 bits (54), Expect = 5.4
Identities = 10/34 (29%), Positives = 17/34 (50%)
Frame = +2
Query: 98 NR*TYPYRYSKCGSLQTKKMSTGMQEELPSCAYG 199
+R TYP CG L+ + +++ + C YG
Sbjct: 879 DRFTYPSVLRACGELREVTIGRNIEQRIRRCRYG 912
>07_01_0250 -
1864990-1865005,1865429-1865502,1865588-1865659,
1865854-1865920,1866365-1866429,1866812-1866843,
1867250-1867326,1867445-1867646,1867733-1867859
Length = 243
Score = 25.4 bits (53), Expect = 7.1
Identities = 12/33 (36%), Positives = 18/33 (54%)
Frame = -3
Query: 249 QRWSLFYHWVLLRCTVCPYAQLGNSSCIPVDIF 151
Q ++Y+ VL C+V + L N +CI D F
Sbjct: 105 QSTRIWYNVVLSNCSVGEFCTLHNGACIGQDGF 137
>04_04_1176 + 31494318-31495685
Length = 455
Score = 25.4 bits (53), Expect = 7.1
Identities = 7/23 (30%), Positives = 15/23 (65%)
Frame = -3
Query: 261 YTVLQRWSLFYHWVLLRCTVCPY 193
Y + +++ + HWV L C++ P+
Sbjct: 154 YRLRRKYGIVEHWVYLACSLMPW 176
>08_01_0397 - 3509186-3510291,3510322-3512335
Length = 1039
Score = 25.0 bits (52), Expect = 9.4
Identities = 12/38 (31%), Positives = 19/38 (50%)
Frame = +3
Query: 42 VSPTFALLSVMSRKRDNEETDKLTRIAIVNADRCKPKR 155
V P A L M +++ DK + A+ N D+ PK+
Sbjct: 289 VLPEVAKLESMPAANVDDKNDKSAKDAVTNGDKKGPKK 326
>07_01_0467 -
3524598-3524837,3524939-3525466,3526242-3526892,
3527015-3527500,3527580-3527792,3527885-3528174,
3528276-3528418,3528633-3528855,3528983-3529160,
3529598-3529867
Length = 1073
Score = 25.0 bits (52), Expect = 9.4
Identities = 11/33 (33%), Positives = 17/33 (51%)
Frame = -2
Query: 271 PHPIHSSSEMVAILSLGVTSMHSLPIRTTGQLF 173
P P SS I+S+ + HS + TG++F
Sbjct: 284 PTPRRVSSLKARIISVAAANKHSAAVADTGEVF 316
>06_02_0066 -
11081446-11081544,11081639-11081846,11083122-11083257,
11083339-11083541,11083616-11083765,11083848-11083964,
11084623-11085119
Length = 469
Score = 25.0 bits (52), Expect = 9.4
Identities = 16/53 (30%), Positives = 23/53 (43%), Gaps = 1/53 (1%)
Frame = +3
Query: 18 KGHANVGKVSPTFALLSVMSRKRDNEETDKLTRIAIVNADRCKPKRCRQ-ECK 173
KGHA +PTF +S E + + A NA + + +R Q CK
Sbjct: 393 KGHATADPSAPTFYARGAVSSVTTTRELESSLQKAYENAIKSQIERLMQAACK 445
>01_06_1466 +
37559600-37559795,37560597-37560730,37561252-37561437,
37562538-37562753,37563008-37563119,37563493-37563663,
37564621-37564684,37565555-37565685,37566263-37566393,
37566843-37566945,37567322-37567398,37567813-37567860,
37568162-37568311,37568810-37569010
Length = 639
Score = 25.0 bits (52), Expect = 9.4
Identities = 9/22 (40%), Positives = 16/22 (72%)
Frame = -3
Query: 195 YAQLGNSSCIPVDIFLVCNDPH 130
+ LG+ S +PVD+F++ + PH
Sbjct: 476 WGDLGSFSEVPVDVFILEDCPH 497
Database: rice
Posted date: Oct 4, 2007 10:57 AM
Number of letters in database: 14,793,348
Number of sequences in database: 37,544
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 8,280,556
Number of Sequences: 37544
Number of extensions: 152992
Number of successful extensions: 437
Number of sequences better than 10.0: 20
Number of HSP's better than 10.0 without gapping: 432
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 437
length of database: 14,793,348
effective HSP length: 70
effective length of database: 12,165,268
effective search space used: 291966432
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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