Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= S06A01NCLL0023_K17
(284 letters)
Database: celegans
27,780 sequences; 12,740,198 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
AL110487-1|CAB54424.1| 610|Caenorhabditis elegans Hypothetical ... 85 1e-17
Z83112-2|CAB05539.1| 391|Caenorhabditis elegans Hypothetical pr... 29 0.71
AF125964-4|ABA03109.1| 414|Caenorhabditis elegans Hypothetical ... 29 0.71
AF047655-3|ABD63244.1| 414|Caenorhabditis elegans Hypothetical ... 29 0.71
AF025465-11|AAB71024.1| 411|Caenorhabditis elegans Hypothetical... 29 0.71
AF016422-3|AAG24173.1| 411|Caenorhabditis elegans Hypothetical ... 29 0.71
AC024831-4|ABD63212.1| 355|Caenorhabditis elegans Hypothetical ... 29 0.71
AF067213-1|AAC17000.2| 462|Caenorhabditis elegans Hypothetical ... 27 2.2
Z46343-6|CAL36520.1| 366|Caenorhabditis elegans Hypothetical pr... 26 3.8
Z46343-5|CAA86458.2| 356|Caenorhabditis elegans Hypothetical pr... 26 3.8
AL137227-1|CAB70238.2| 611|Caenorhabditis elegans Hypothetical ... 26 5.0
AL117206-13|CAB60454.2| 1651|Caenorhabditis elegans Hypothetical... 26 5.0
AL110498-8|CAB57911.2| 1651|Caenorhabditis elegans Hypothetical ... 26 5.0
Z74041-6|CAA98517.2| 337|Caenorhabditis elegans Hypothetical pr... 25 8.7
Z70757-1|CAA94805.1| 497|Caenorhabditis elegans Hypothetical pr... 25 8.7
AY130758-5|AAN61521.1| 2693|Caenorhabditis elegans 301KDa_2 prot... 25 8.7
AY130758-4|AAN61520.1| 2708|Caenorhabditis elegans 301KDa_1 prot... 25 8.7
AY130758-2|AAN61518.1| 18519|Caenorhabditis elegans 2MDa_2 prote... 25 8.7
AY130758-1|AAN61517.1| 18534|Caenorhabditis elegans 2MDa_1 prote... 25 8.7
AL032657-5|CAD27615.1| 1045|Caenorhabditis elegans Hypothetical ... 25 8.7
AL032657-4|CAD27614.1| 1070|Caenorhabditis elegans Hypothetical ... 25 8.7
AL032657-3|CAA21739.1| 1111|Caenorhabditis elegans Hypothetical ... 25 8.7
AF332568-1|AAG60061.1| 1111|Caenorhabditis elegans CED-1 protein. 25 8.7
AF039719-11|AAB96750.1| 191|Caenorhabditis elegans Hypothetical... 25 8.7
>AL110487-1|CAB54424.1| 610|Caenorhabditis elegans Hypothetical
protein Y39E4B.1 protein.
Length = 610
Score = 84.6 bits (200), Expect = 1e-17
Identities = 44/74 (59%), Positives = 47/74 (63%), Gaps = 3/74 (4%)
Frame = +3
Query: 72 MSRKRD---NEETDKLTRIAIVNADRCKPKRCRQECKKSCPVVRMGKLCIEVTPNDKIAT 242
MSRK N ETD RIAIV DRCKPK C CK++CPV R GK CI V I+
Sbjct: 1 MSRKGPLIKNNETDVPLRIAIVEKDRCKPKNCGLACKRACPVNRQGKQCIVVEATSTISQ 60
Query: 243 ISEELCIGCGIGVK 284
ISE LCIGCGI VK
Sbjct: 61 ISEILCIGCGICVK 74
>Z83112-2|CAB05539.1| 391|Caenorhabditis elegans Hypothetical
protein K02B7.2 protein.
Length = 391
Score = 28.7 bits (61), Expect = 0.71
Identities = 14/33 (42%), Positives = 18/33 (54%)
Frame = -2
Query: 283 FTPIPHPIHSSSEMVAILSLGVTSMHSLPIRTT 185
F P HPI + I+ LG+TS H+LP T
Sbjct: 153 FKPDMHPIAKKGGKICIVDLGLTS-HTLPTEQT 184
>AF125964-4|ABA03109.1| 414|Caenorhabditis elegans Hypothetical
protein W03G1.3 protein.
Length = 414
Score = 28.7 bits (61), Expect = 0.71
Identities = 14/33 (42%), Positives = 18/33 (54%)
Frame = -2
Query: 283 FTPIPHPIHSSSEMVAILSLGVTSMHSLPIRTT 185
F P HPI + I+ LG+TS H+LP T
Sbjct: 117 FKPDMHPIAKKGGKICIVDLGLTS-HTLPTEQT 148
>AF047655-3|ABD63244.1| 414|Caenorhabditis elegans Hypothetical
protein C17B7.13 protein.
Length = 414
Score = 28.7 bits (61), Expect = 0.71
Identities = 14/33 (42%), Positives = 18/33 (54%)
Frame = -2
Query: 283 FTPIPHPIHSSSEMVAILSLGVTSMHSLPIRTT 185
F P HPI + I+ LG+TS H+LP T
Sbjct: 117 FKPDMHPIAKKGGKICIVDLGLTS-HTLPTEQT 148
>AF025465-11|AAB71024.1| 411|Caenorhabditis elegans Hypothetical
protein K02E7.2 protein.
Length = 411
Score = 28.7 bits (61), Expect = 0.71
Identities = 14/33 (42%), Positives = 18/33 (54%)
Frame = -2
Query: 283 FTPIPHPIHSSSEMVAILSLGVTSMHSLPIRTT 185
F P HPI + I+ LG+TS H+LP T
Sbjct: 114 FKPDMHPIAKKGGKICIVDLGLTS-HTLPTEQT 145
>AF016422-3|AAG24173.1| 411|Caenorhabditis elegans Hypothetical
protein R09E12.5 protein.
Length = 411
Score = 28.7 bits (61), Expect = 0.71
Identities = 14/33 (42%), Positives = 18/33 (54%)
Frame = -2
Query: 283 FTPIPHPIHSSSEMVAILSLGVTSMHSLPIRTT 185
F P HPI + I+ LG+TS H+LP T
Sbjct: 114 FKPDMHPIAKKGGKICIVDLGLTS-HTLPTEQT 145
>AC024831-4|ABD63212.1| 355|Caenorhabditis elegans Hypothetical
protein Y55F3C.11 protein.
Length = 355
Score = 28.7 bits (61), Expect = 0.71
Identities = 14/33 (42%), Positives = 18/33 (54%)
Frame = -2
Query: 283 FTPIPHPIHSSSEMVAILSLGVTSMHSLPIRTT 185
F P HPI + I+ LG+TS H+LP T
Sbjct: 117 FKPDMHPIAKKGGKICIVDLGLTS-HTLPTEQT 148
>AF067213-1|AAC17000.2| 462|Caenorhabditis elegans Hypothetical
protein T25B2.2 protein.
Length = 462
Score = 27.1 bits (57), Expect = 2.2
Identities = 12/30 (40%), Positives = 18/30 (60%)
Frame = +2
Query: 134 GSLQTKKMSTGMQEELPSCAYGQTVHRSNT 223
G TKK++ + +E+P+ G VHRS T
Sbjct: 416 GKTATKKVTIQVPDEIPTQPKGHFVHRSAT 445
>Z46343-6|CAL36520.1| 366|Caenorhabditis elegans Hypothetical
protein T23F11.3b protein.
Length = 366
Score = 26.2 bits (55), Expect = 3.8
Identities = 11/31 (35%), Positives = 16/31 (51%)
Frame = -3
Query: 228 HWVLLRCTVCPYAQLGNSSCIPVDIFLVCND 136
H +L C Y+ +GN P+ FL+ ND
Sbjct: 293 HAWILSCLYVSYSYMGNEISYPLKPFLIGND 323
>Z46343-5|CAA86458.2| 356|Caenorhabditis elegans Hypothetical
protein T23F11.3a protein.
Length = 356
Score = 26.2 bits (55), Expect = 3.8
Identities = 11/31 (35%), Positives = 16/31 (51%)
Frame = -3
Query: 228 HWVLLRCTVCPYAQLGNSSCIPVDIFLVCND 136
H +L C Y+ +GN P+ FL+ ND
Sbjct: 283 HAWILSCLYVSYSYMGNEISYPLKPFLIGND 313
>AL137227-1|CAB70238.2| 611|Caenorhabditis elegans Hypothetical
protein F58D5.1 protein.
Length = 611
Score = 25.8 bits (54), Expect = 5.0
Identities = 10/16 (62%), Positives = 13/16 (81%)
Frame = +2
Query: 41 SIANVRSFISDVPKTR 88
SIAN R FI ++PKT+
Sbjct: 277 SIANTRLFIGNIPKTK 292
>AL117206-13|CAB60454.2| 1651|Caenorhabditis elegans Hypothetical
protein Y64G10A.7 protein.
Length = 1651
Score = 25.8 bits (54), Expect = 5.0
Identities = 13/41 (31%), Positives = 16/41 (39%)
Frame = +3
Query: 138 RCKPKRCRQECKKSCPVVRMGKLCIEVTPNDKIATISEELC 260
RC P +C K CP G LC + P E+ C
Sbjct: 773 RCDP--VTGDCTKKCPAGYQGNLCDQPCPAGYFGYDCEQKC 811
>AL110498-8|CAB57911.2| 1651|Caenorhabditis elegans Hypothetical
protein Y64G10A.7 protein.
Length = 1651
Score = 25.8 bits (54), Expect = 5.0
Identities = 13/41 (31%), Positives = 16/41 (39%)
Frame = +3
Query: 138 RCKPKRCRQECKKSCPVVRMGKLCIEVTPNDKIATISEELC 260
RC P +C K CP G LC + P E+ C
Sbjct: 773 RCDP--VTGDCTKKCPAGYQGNLCDQPCPAGYFGYDCEQKC 811
>Z74041-6|CAA98517.2| 337|Caenorhabditis elegans Hypothetical
protein T03F7.3 protein.
Length = 337
Score = 25.0 bits (52), Expect = 8.7
Identities = 10/24 (41%), Positives = 14/24 (58%)
Frame = -1
Query: 146 FATIRIYYSDTGKFICFLIISFSG 75
F+ I YY+ + CFLI+S G
Sbjct: 270 FSIITDYYNQSANNFCFLIMSLHG 293
>Z70757-1|CAA94805.1| 497|Caenorhabditis elegans Hypothetical
protein ZK287.1 protein.
Length = 497
Score = 25.0 bits (52), Expect = 8.7
Identities = 14/48 (29%), Positives = 20/48 (41%)
Frame = -2
Query: 181 QLFLHSCRHLFGLQRSAFTIAIXXXXXXXXXXRFRDITDKRANVGDTL 38
QLF++ CR GL F +A F D+ K ++ D L
Sbjct: 345 QLFINECRRALGLSMK-FWVAEIHEIVKDTILHFSDLRTKCGDLNDAL 391
>AY130758-5|AAN61521.1| 2693|Caenorhabditis elegans 301KDa_2 protein
protein.
Length = 2693
Score = 25.0 bits (52), Expect = 8.7
Identities = 9/22 (40%), Positives = 13/22 (59%)
Frame = +3
Query: 210 IEVTPNDKIATISEELCIGCGI 275
IEV P A ++E LC+ C +
Sbjct: 2283 IEVLPGRSQANLNESLCVECSV 2304
>AY130758-4|AAN61520.1| 2708|Caenorhabditis elegans 301KDa_1 protein
protein.
Length = 2708
Score = 25.0 bits (52), Expect = 8.7
Identities = 9/22 (40%), Positives = 13/22 (59%)
Frame = +3
Query: 210 IEVTPNDKIATISEELCIGCGI 275
IEV P A ++E LC+ C +
Sbjct: 2298 IEVLPGRSQANLNESLCVECSV 2319
>AY130758-2|AAN61518.1| 18519|Caenorhabditis elegans 2MDa_2 protein
protein.
Length = 18519
Score = 25.0 bits (52), Expect = 8.7
Identities = 9/22 (40%), Positives = 13/22 (59%)
Frame = +3
Query: 210 IEVTPNDKIATISEELCIGCGI 275
IEV P A ++E LC+ C +
Sbjct: 18109 IEVLPGRSQANLNESLCVECSV 18130
>AY130758-1|AAN61517.1| 18534|Caenorhabditis elegans 2MDa_1 protein
protein.
Length = 18534
Score = 25.0 bits (52), Expect = 8.7
Identities = 9/22 (40%), Positives = 13/22 (59%)
Frame = +3
Query: 210 IEVTPNDKIATISEELCIGCGI 275
IEV P A ++E LC+ C +
Sbjct: 18124 IEVLPGRSQANLNESLCVECSV 18145
>AL032657-5|CAD27615.1| 1045|Caenorhabditis elegans Hypothetical
protein Y47H9C.4c protein.
Length = 1045
Score = 25.0 bits (52), Expect = 8.7
Identities = 9/23 (39%), Positives = 12/23 (52%)
Frame = +3
Query: 141 CKPKRCRQECKKSCPVVRMGKLC 209
CKP R + C + CP+ G C
Sbjct: 448 CKPGRTGKNCSEPCPLDFYGPNC 470
>AL032657-4|CAD27614.1| 1070|Caenorhabditis elegans Hypothetical
protein Y47H9C.4b protein.
Length = 1070
Score = 25.0 bits (52), Expect = 8.7
Identities = 9/23 (39%), Positives = 12/23 (52%)
Frame = +3
Query: 141 CKPKRCRQECKKSCPVVRMGKLC 209
CKP R + C + CP+ G C
Sbjct: 448 CKPGRTGKNCSEPCPLDFYGPNC 470
>AL032657-3|CAA21739.1| 1111|Caenorhabditis elegans Hypothetical
protein Y47H9C.4a protein.
Length = 1111
Score = 25.0 bits (52), Expect = 8.7
Identities = 9/23 (39%), Positives = 12/23 (52%)
Frame = +3
Query: 141 CKPKRCRQECKKSCPVVRMGKLC 209
CKP R + C + CP+ G C
Sbjct: 448 CKPGRTGKNCSEPCPLDFYGPNC 470
>AF332568-1|AAG60061.1| 1111|Caenorhabditis elegans CED-1 protein.
Length = 1111
Score = 25.0 bits (52), Expect = 8.7
Identities = 9/23 (39%), Positives = 12/23 (52%)
Frame = +3
Query: 141 CKPKRCRQECKKSCPVVRMGKLC 209
CKP R + C + CP+ G C
Sbjct: 448 CKPGRTGKNCSEPCPLDFYGPNC 470
>AF039719-11|AAB96750.1| 191|Caenorhabditis elegans Hypothetical
protein K04F10.1 protein.
Length = 191
Score = 25.0 bits (52), Expect = 8.7
Identities = 10/40 (25%), Positives = 22/40 (55%), Gaps = 1/40 (2%)
Frame = +3
Query: 141 CKPKRCRQECKKSCPVVRMGKLCIEVTPN-DKIATISEEL 257
C P++ + C ++++ +CI +T N DKI + ++
Sbjct: 98 CNPRKSGENYGLDCEILQVDDVCIVLTRNEDKITDCAVDI 137
Database: celegans
Posted date: Oct 23, 2007 1:18 PM
Number of letters in database: 12,740,198
Number of sequences in database: 27,780
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 7,290,859
Number of Sequences: 27780
Number of extensions: 144919
Number of successful extensions: 497
Number of sequences better than 10.0: 24
Number of HSP's better than 10.0 without gapping: 450
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 497
length of database: 12,740,198
effective HSP length: 69
effective length of database: 10,823,378
effective search space used: 270584450
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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