Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= S06A01NCLL0023_K17
(284 letters)
Database: bee
438 sequences; 146,343 total letters
Searching......................................................done
Score E
Sequences producing significant alignments: (bits) Value
DQ384991-1|ABD51779.1| 94|Apis mellifera allergen Api m 6 vari... 24 0.32
DQ384990-1|ABD51778.1| 92|Apis mellifera allergen Api m 6 vari... 24 0.32
DQ667192-1|ABG75744.1| 489|Apis mellifera pH-sensitive chloride... 23 0.97
AF388659-4|AAK71996.1| 1308|Apis mellifera NFRKB-like protein pr... 23 0.97
AB193550-1|BAD66824.1| 699|Apis mellifera soluble guanylyl cycl... 22 1.3
AY395073-1|AAQ96729.1| 203|Apis mellifera GABA neurotransmitter... 22 1.7
AB231585-1|BAE17127.1| 898|Apis mellifera Mahya protein. 21 2.2
DQ667186-1|ABG75738.1| 447|Apis mellifera glutamate-gated chlor... 21 3.9
DQ667185-1|ABG75737.1| 447|Apis mellifera glutamate-gated chlor... 21 3.9
DQ667182-1|ABG75734.1| 445|Apis mellifera GABA-gated chloride c... 20 5.2
DQ667181-1|ABG75733.1| 445|Apis mellifera GABA-gated chloride c... 20 5.2
DQ011228-1|AAY63897.1| 486|Apis mellifera Amt-2-like protein pr... 20 5.2
AY898652-1|AAX83121.1| 349|Apis mellifera AKH receptor protein. 20 5.2
AF094822-1|AAC63381.1| 365|Apis mellifera GABA receptor Rdl sub... 20 5.2
AY739658-1|AAU85297.1| 664|Apis mellifera hyperpolarization-act... 20 6.8
AY280848-1|AAQ16312.1| 632|Apis mellifera hyperpolarization-act... 20 6.8
DQ468657-1|ABE02558.1| 322|Apis mellifera 1,4,5-trisphosphate r... 19 9.0
DQ435327-1|ABD92642.1| 145|Apis mellifera OBP10 protein. 19 9.0
>DQ384991-1|ABD51779.1| 94|Apis mellifera allergen Api m 6 variant
2 precursor protein.
Length = 94
Score = 24.2 bits (50), Expect = 0.32
Identities = 9/22 (40%), Positives = 13/22 (59%)
Frame = +3
Query: 153 RCRQECKKSCPVVRMGKLCIEV 218
RC C++ CP V LCI++
Sbjct: 45 RCDGRCQRFCPNVVPKPLCIKI 66
>DQ384990-1|ABD51778.1| 92|Apis mellifera allergen Api m 6 variant
1 precursor protein.
Length = 92
Score = 24.2 bits (50), Expect = 0.32
Identities = 9/22 (40%), Positives = 13/22 (59%)
Frame = +3
Query: 153 RCRQECKKSCPVVRMGKLCIEV 218
RC C++ CP V LCI++
Sbjct: 45 RCDGRCQRFCPNVVPKPLCIKI 66
>DQ667192-1|ABG75744.1| 489|Apis mellifera pH-sensitive chloride
channel variant 4 protein.
Length = 489
Score = 22.6 bits (46), Expect = 0.97
Identities = 8/22 (36%), Positives = 15/22 (68%), Gaps = 2/22 (9%)
Frame = -3
Query: 213 RCTVCP--YAQLGNSSCIPVDI 154
+C++C + + GN SC+ VD+
Sbjct: 273 KCSLCQRRFEEQGNYSCLKVDL 294
>AF388659-4|AAK71996.1| 1308|Apis mellifera NFRKB-like protein
protein.
Length = 1308
Score = 22.6 bits (46), Expect = 0.97
Identities = 12/30 (40%), Positives = 15/30 (50%)
Frame = +3
Query: 9 GTRKGHANVGKVSPTFALLSVMSRKRDNEE 98
G K NVG +S ALL V+ N+E
Sbjct: 751 GVAKNKKNVGSMSRNKALLPVIKPANVNKE 780
>AB193550-1|BAD66824.1| 699|Apis mellifera soluble guanylyl cyclase
alpha 1 subunit protein.
Length = 699
Score = 22.2 bits (45), Expect = 1.3
Identities = 6/15 (40%), Positives = 10/15 (66%)
Frame = +3
Query: 231 KIATISEELCIGCGI 275
K+ TI + C+ CG+
Sbjct: 534 KVETIGDAYCVACGL 548
>AY395073-1|AAQ96729.1| 203|Apis mellifera GABA neurotransmitter
transporter-1A protein.
Length = 203
Score = 21.8 bits (44), Expect = 1.7
Identities = 8/28 (28%), Positives = 16/28 (57%)
Frame = -3
Query: 261 YTVLQRWSLFYHWVLLRCTVCPYAQLGN 178
Y V+ W++FY ++ +R + P+ N
Sbjct: 77 YIVILAWAIFYFFMSMRSEL-PWGSCNN 103
>AB231585-1|BAE17127.1| 898|Apis mellifera Mahya protein.
Length = 898
Score = 21.4 bits (43), Expect = 2.2
Identities = 7/10 (70%), Positives = 8/10 (80%)
Frame = +3
Query: 249 EELCIGCGIG 278
EELC GC +G
Sbjct: 268 EELCRGCNLG 277
>DQ667186-1|ABG75738.1| 447|Apis mellifera glutamate-gated chloride
channel protein.
Length = 447
Score = 20.6 bits (41), Expect = 3.9
Identities = 9/23 (39%), Positives = 17/23 (73%)
Frame = -2
Query: 250 SEMVAILSLGVTSMHSLPIRTTG 182
S + A +SLGVT++ ++ +T+G
Sbjct: 268 SAVPARVSLGVTTLLTMATQTSG 290
>DQ667185-1|ABG75737.1| 447|Apis mellifera glutamate-gated chloride
channel protein.
Length = 447
Score = 20.6 bits (41), Expect = 3.9
Identities = 9/23 (39%), Positives = 17/23 (73%)
Frame = -2
Query: 250 SEMVAILSLGVTSMHSLPIRTTG 182
S + A +SLGVT++ ++ +T+G
Sbjct: 268 SAVPARVSLGVTTLLTMATQTSG 290
>DQ667182-1|ABG75734.1| 445|Apis mellifera GABA-gated chloride
channel protein.
Length = 445
Score = 20.2 bits (40), Expect = 5.2
Identities = 9/35 (25%), Positives = 15/35 (42%)
Frame = -1
Query: 281 YTNTAPNTQFFRDGRYFIIGCYFDAQFAHTHNWAT 177
Y+ A QF R Y++I Y + +W +
Sbjct: 207 YSRLACEIQFVRSMGYYLIQIYIPSGLIVIISWVS 241
>DQ667181-1|ABG75733.1| 445|Apis mellifera GABA-gated chloride
channel protein.
Length = 445
Score = 20.2 bits (40), Expect = 5.2
Identities = 9/35 (25%), Positives = 15/35 (42%)
Frame = -1
Query: 281 YTNTAPNTQFFRDGRYFIIGCYFDAQFAHTHNWAT 177
Y+ A QF R Y++I Y + +W +
Sbjct: 207 YSRLACEIQFVRSMGYYLIQIYIPSGLIVIISWVS 241
>DQ011228-1|AAY63897.1| 486|Apis mellifera Amt-2-like protein
protein.
Length = 486
Score = 20.2 bits (40), Expect = 5.2
Identities = 5/9 (55%), Positives = 7/9 (77%)
Frame = -3
Query: 234 FYHWVLLRC 208
F HW ++RC
Sbjct: 304 FNHWTVMRC 312
>AY898652-1|AAX83121.1| 349|Apis mellifera AKH receptor protein.
Length = 349
Score = 20.2 bits (40), Expect = 5.2
Identities = 10/34 (29%), Positives = 16/34 (47%)
Frame = -1
Query: 215 FDAQFAHTHNWATLLAFLSTSFWFATIRIYYSDT 114
F+A +TH L + +WF + I Y+ T
Sbjct: 192 FNAFPTYTHEITYSLFGMIMMYWFPLVVIIYTYT 225
>AF094822-1|AAC63381.1| 365|Apis mellifera GABA receptor Rdl
subunit protein.
Length = 365
Score = 20.2 bits (40), Expect = 5.2
Identities = 9/35 (25%), Positives = 15/35 (42%)
Frame = -1
Query: 281 YTNTAPNTQFFRDGRYFIIGCYFDAQFAHTHNWAT 177
Y+ A QF R Y++I Y + +W +
Sbjct: 146 YSRLACEIQFVRSMGYYLIQIYIPSGLIVIISWVS 180
>AY739658-1|AAU85297.1| 664|Apis mellifera
hyperpolarization-activated ion channelvariant L
protein.
Length = 664
Score = 19.8 bits (39), Expect = 6.8
Identities = 8/25 (32%), Positives = 15/25 (60%)
Frame = -2
Query: 262 IHSSSEMVAILSLGVTSMHSLPIRT 188
+++ +E A S S+HS+ +RT
Sbjct: 601 VNALAEQAAHASASEESVHSMELRT 625
>AY280848-1|AAQ16312.1| 632|Apis mellifera
hyperpolarization-activated ion channel protein.
Length = 632
Score = 19.8 bits (39), Expect = 6.8
Identities = 8/25 (32%), Positives = 15/25 (60%)
Frame = -2
Query: 262 IHSSSEMVAILSLGVTSMHSLPIRT 188
+++ +E A S S+HS+ +RT
Sbjct: 569 VNALAEQAAHASASEESVHSMELRT 593
>DQ468657-1|ABE02558.1| 322|Apis mellifera 1,4,5-trisphosphate
receptor protein.
Length = 322
Score = 19.4 bits (38), Expect = 9.0
Identities = 6/10 (60%), Positives = 9/10 (90%)
Frame = +3
Query: 186 VVRMGKLCIE 215
++RM KLCI+
Sbjct: 266 LIRMNKLCIQ 275
>DQ435327-1|ABD92642.1| 145|Apis mellifera OBP10 protein.
Length = 145
Score = 19.4 bits (38), Expect = 9.0
Identities = 6/13 (46%), Positives = 9/13 (69%)
Frame = +2
Query: 95 GNR*TYPYRYSKC 133
G+ Y YR++KC
Sbjct: 121 GDNCEYAYRFNKC 133
Database: bee
Posted date: Oct 23, 2007 1:17 PM
Number of letters in database: 146,343
Number of sequences in database: 438
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 89,505
Number of Sequences: 438
Number of extensions: 1887
Number of successful extensions: 18
Number of sequences better than 10.0: 18
Number of HSP's better than 10.0 without gapping: 18
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 18
length of database: 146,343
effective HSP length: 49
effective length of database: 124,881
effective search space used: 5619645
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 38 (20.3 bits)
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