Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= S06A01NCLL0023_K15
(259 letters)
Database: celegans
27,780 sequences; 12,740,198 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
Z29095-3|CAA82355.1| 161|Caenorhabditis elegans Hypothetical pr... 55 8e-09
AC024762-4|AAF59473.1| 161|Caenorhabditis elegans Vacuolar h at... 55 8e-09
AB009566-1|BAA75066.1| 161|Caenorhabditis elegans Vha3 protein ... 55 8e-09
AB000918-1|BAA22596.1| 161|Caenorhabditis elegans VHA-2 protein. 55 8e-09
Z29095-6|CAA82354.1| 169|Caenorhabditis elegans Hypothetical pr... 52 6e-08
AB000917-1|BAA22595.1| 169|Caenorhabditis elegans VHA-1 protein. 52 6e-08
AL032632-5|CAA21585.1| 297|Caenorhabditis elegans Hypothetical ... 26 4.2
AF022985-16|AAV28323.1| 307|Caenorhabditis elegans Hypothetical... 25 5.6
Z81476-2|CAB03918.1| 1469|Caenorhabditis elegans Hypothetical pr... 25 7.4
Z81465-3|CAC42253.4| 800|Caenorhabditis elegans Hypothetical pr... 25 7.4
AC006624-3|AAF39786.2| 301|Caenorhabditis elegans Hypothetical ... 25 9.8
>Z29095-3|CAA82355.1| 161|Caenorhabditis elegans Hypothetical
protein R10E11.2 protein.
Length = 161
Score = 54.8 bits (126), Expect = 8e-09
Identities = 26/44 (59%), Positives = 30/44 (68%)
Frame = +2
Query: 128 LPHSRKMAENPIYGPFFGVMGAASEIIFSSLGAAYGTAKSGTGI 259
+ + + AE Y PFFG MGAAS IF+ LGAAYGTAKS GI
Sbjct: 1 MSYDLETAERAAYAPFFGYMGAASAQIFTVLGAAYGTAKSAVGI 44
>AC024762-4|AAF59473.1| 161|Caenorhabditis elegans Vacuolar h
atpase protein 3 protein.
Length = 161
Score = 54.8 bits (126), Expect = 8e-09
Identities = 26/44 (59%), Positives = 30/44 (68%)
Frame = +2
Query: 128 LPHSRKMAENPIYGPFFGVMGAASEIIFSSLGAAYGTAKSGTGI 259
+ + + AE Y PFFG MGAAS IF+ LGAAYGTAKS GI
Sbjct: 1 MSYDLETAERAAYAPFFGYMGAASAQIFTVLGAAYGTAKSAVGI 44
>AB009566-1|BAA75066.1| 161|Caenorhabditis elegans Vha3 protein
protein.
Length = 161
Score = 54.8 bits (126), Expect = 8e-09
Identities = 26/44 (59%), Positives = 30/44 (68%)
Frame = +2
Query: 128 LPHSRKMAENPIYGPFFGVMGAASEIIFSSLGAAYGTAKSGTGI 259
+ + + AE Y PFFG MGAAS IF+ LGAAYGTAKS GI
Sbjct: 1 MSYDLETAERAAYAPFFGYMGAASAQIFTVLGAAYGTAKSAVGI 44
>AB000918-1|BAA22596.1| 161|Caenorhabditis elegans VHA-2 protein.
Length = 161
Score = 54.8 bits (126), Expect = 8e-09
Identities = 26/44 (59%), Positives = 30/44 (68%)
Frame = +2
Query: 128 LPHSRKMAENPIYGPFFGVMGAASEIIFSSLGAAYGTAKSGTGI 259
+ + + AE Y PFFG MGAAS IF+ LGAAYGTAKS GI
Sbjct: 1 MSYDLETAERAAYAPFFGYMGAASAQIFTVLGAAYGTAKSAVGI 44
>Z29095-6|CAA82354.1| 169|Caenorhabditis elegans Hypothetical
protein R10E11.8 protein.
Length = 169
Score = 52.0 bits (119), Expect = 6e-08
Identities = 21/36 (58%), Positives = 28/36 (77%)
Frame = +2
Query: 152 ENPIYGPFFGVMGAASEIIFSSLGAAYGTAKSGTGI 259
E +YGPFFG +G S + F++ G+AYGTAK+GTGI
Sbjct: 17 EQAMYGPFFGSLGVTSAMAFAAAGSAYGTAKAGTGI 52
>AB000917-1|BAA22595.1| 169|Caenorhabditis elegans VHA-1 protein.
Length = 169
Score = 52.0 bits (119), Expect = 6e-08
Identities = 21/36 (58%), Positives = 28/36 (77%)
Frame = +2
Query: 152 ENPIYGPFFGVMGAASEIIFSSLGAAYGTAKSGTGI 259
E +YGPFFG +G S + F++ G+AYGTAK+GTGI
Sbjct: 17 EQAMYGPFFGSLGVTSAMAFAAAGSAYGTAKAGTGI 52
>AL032632-5|CAA21585.1| 297|Caenorhabditis elegans Hypothetical
protein Y11D7A.9 protein.
Length = 297
Score = 25.8 bits (54), Expect = 4.2
Identities = 8/29 (27%), Positives = 16/29 (55%)
Frame = +3
Query: 51 IFVCAKVVSWSECVQIVIRVFGTCKYSHI 137
I + + ++ W +C+ VF C+YS +
Sbjct: 224 ILIASFILYWRKCITWAYDVFALCEYSGV 252
>AF022985-16|AAV28323.1| 307|Caenorhabditis elegans Hypothetical
protein T15B7.1 protein.
Length = 307
Score = 25.4 bits (53), Expect = 5.6
Identities = 9/23 (39%), Positives = 15/23 (65%)
Frame = +1
Query: 127 TPTFKKNGRKSNLWTFLWSYGGG 195
T T NG+++ +W + +YGGG
Sbjct: 94 TYTILVNGKETEVWCDMQTYGGG 116
>Z81476-2|CAB03918.1| 1469|Caenorhabditis elegans Hypothetical
protein C25F9.2 protein.
Length = 1469
Score = 25.0 bits (52), Expect = 7.4
Identities = 13/33 (39%), Positives = 17/33 (51%)
Frame = -3
Query: 128 VFTGPKNSDDYLHTLTPRNYFSTDKYGPSFADS 30
++ P+N D L TL PR Y Y P F +S
Sbjct: 793 LYNHPQNYDKILPTLPPREY-----YAPKFMNS 820
>Z81465-3|CAC42253.4| 800|Caenorhabditis elegans Hypothetical
protein C09F9.3 protein.
Length = 800
Score = 25.0 bits (52), Expect = 7.4
Identities = 15/42 (35%), Positives = 20/42 (47%), Gaps = 1/42 (2%)
Frame = +3
Query: 69 VVSWSECVQIVIRVFGTCKYSHIQEKWPKI-QSMDLSLELWG 191
+ SW E Q++ +F TC+ S E I Q S LWG
Sbjct: 162 IPSWLEFTQLIETIFETCRESKEGEVASYIPQLARQSPHLWG 203
>AC006624-3|AAF39786.2| 301|Caenorhabditis elegans Hypothetical
protein C53D5.4 protein.
Length = 301
Score = 24.6 bits (51), Expect = 9.8
Identities = 11/27 (40%), Positives = 15/27 (55%)
Frame = +3
Query: 174 SLELWGRRLRSSSAPLVLHMAQPSQAP 254
S E G+R + +AP H AQP+ P
Sbjct: 204 SPEKSGKRAKKRAAPSSAHEAQPNNGP 230
Database: celegans
Posted date: Oct 23, 2007 1:18 PM
Number of letters in database: 12,740,198
Number of sequences in database: 27,780
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 7,079,958
Number of Sequences: 27780
Number of extensions: 144599
Number of successful extensions: 334
Number of sequences better than 10.0: 11
Number of HSP's better than 10.0 without gapping: 332
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 334
length of database: 12,740,198
effective HSP length: 64
effective length of database: 10,962,278
effective search space used: 230207838
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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