Samia BLAST Result against bee

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= S06A01NCLL0023_K15
         (259 letters)

Database: bee 
           438 sequences; 146,343 total letters

Searching......................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

AY343324-1|AAQ21381.1|  156|Apis mellifera vacuolar H+ ATP synth...    69   9e-15
DQ013068-1|AAY81956.1|  931|Apis mellifera dusty protein kinase ...    22   1.1  
DQ013067-1|AAY81955.1|  969|Apis mellifera dusty protein kinase ...    22   1.1  
AJ849455-1|CAH60991.1|  366|Apis mellifera twist protein protein.      21   3.2  
DQ026038-1|AAY87897.1|  520|Apis mellifera nicotinic acetylcholi...    20   4.3  
DQ667183-1|ABG75735.1|  463|Apis mellifera GABA-gated ion channe...    19   7.4  
DQ015969-1|AAY81926.1|  397|Apis mellifera stargazin related pro...    19   9.8  
AY463910-1|AAR24352.1|  843|Apis mellifera metabotropic glutamat...    19   9.8  
AB161181-1|BAD08343.1|  933|Apis mellifera metabotropic glutamat...    19   9.8  

>AY343324-1|AAQ21381.1|  156|Apis mellifera vacuolar H+ ATP synthase
           16 kDa proteolipidsubunit protein.
          Length = 156

 Score = 68.9 bits (161), Expect = 9e-15
 Identities = 31/36 (86%), Positives = 34/36 (94%)
 Frame = +2

Query: 152 ENPIYGPFFGVMGAASEIIFSSLGAAYGTAKSGTGI 259
           ++PIY PFFGVMGAAS IIFS+LGAAYGTAKSGTGI
Sbjct: 5   DHPIYAPFFGVMGAASAIIFSALGAAYGTAKSGTGI 40


>DQ013068-1|AAY81956.1|  931|Apis mellifera dusty protein kinase
           isoform B protein.
          Length = 931

 Score = 22.2 bits (45), Expect = 1.1
 Identities = 9/23 (39%), Positives = 13/23 (56%)
 Frame = +3

Query: 72  VSWSECVQIVIRVFGTCKYSHIQ 140
           +SW E +QI + V    +Y H Q
Sbjct: 694 LSWLERIQIALDVLEGIRYLHSQ 716


>DQ013067-1|AAY81955.1|  969|Apis mellifera dusty protein kinase
           isoform A protein.
          Length = 969

 Score = 22.2 bits (45), Expect = 1.1
 Identities = 9/23 (39%), Positives = 13/23 (56%)
 Frame = +3

Query: 72  VSWSECVQIVIRVFGTCKYSHIQ 140
           +SW E +QI + V    +Y H Q
Sbjct: 732 LSWLERIQIALDVLEGIRYLHSQ 754


>AJ849455-1|CAH60991.1|  366|Apis mellifera twist protein protein.
          Length = 366

 Score = 20.6 bits (41), Expect = 3.2
 Identities = 8/22 (36%), Positives = 14/22 (63%)
 Frame = -1

Query: 244 LGCAICSTKGAEDDLRRRPHNS 179
           L C + +T+GA+D   R P ++
Sbjct: 308 LHCNMENTEGADDASERNPRSA 329


>DQ026038-1|AAY87897.1|  520|Apis mellifera nicotinic acetylcholine
           receptor beta1subunit protein.
          Length = 520

 Score = 20.2 bits (40), Expect = 4.3
 Identities = 7/12 (58%), Positives = 9/12 (75%)
 Frame = -2

Query: 39  CRLNRMGHMTTS 4
           C++NR  H TTS
Sbjct: 405 CKINRKVHHTTS 416


>DQ667183-1|ABG75735.1|  463|Apis mellifera GABA-gated ion channel
           protein.
          Length = 463

 Score = 19.4 bits (38), Expect = 7.4
 Identities = 7/11 (63%), Positives = 8/11 (72%)
 Frame = -3

Query: 98  YLHTLTPRNYF 66
           YLHT+T  N F
Sbjct: 99  YLHTITSPNKF 109


>DQ015969-1|AAY81926.1|  397|Apis mellifera stargazin related
           protein STG-1 protein.
          Length = 397

 Score = 19.0 bits (37), Expect = 9.8
 Identities = 6/15 (40%), Positives = 10/15 (66%)
 Frame = -3

Query: 74  NYFSTDKYGPSFADS 30
           +YF  ++Y P  +DS
Sbjct: 122 DYFPNEEYSPDPSDS 136


>AY463910-1|AAR24352.1|  843|Apis mellifera metabotropic glutamate
           receptor 1 protein.
          Length = 843

 Score = 19.0 bits (37), Expect = 9.8
 Identities = 6/10 (60%), Positives = 8/10 (80%)
 Frame = +2

Query: 167 GPFFGVMGAA 196
           GP FGV+G +
Sbjct: 68  GPIFGVIGGS 77


>AB161181-1|BAD08343.1|  933|Apis mellifera metabotropic glutamate
           receptor protein.
          Length = 933

 Score = 19.0 bits (37), Expect = 9.8
 Identities = 6/10 (60%), Positives = 8/10 (80%)
 Frame = +2

Query: 167 GPFFGVMGAA 196
           GP FGV+G +
Sbjct: 158 GPIFGVIGGS 167


  Database: bee
    Posted date:  Oct 23, 2007  1:17 PM
  Number of letters in database: 146,343
  Number of sequences in database:  438
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 84,884
Number of Sequences: 438
Number of extensions: 1871
Number of successful extensions: 9
Number of sequences better than 10.0: 9
Number of HSP's better than 10.0 without gapping: 9
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 9
length of database: 146,343
effective HSP length: 48
effective length of database: 125,319
effective search space used:  4636803
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 37 (19.9 bits)