Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= S06A01NCLL0023_K14
(327 letters)
Database: rice
37,544 sequences; 14,793,348 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
12_02_1282 + 27528159-27529148,27529549-27529614 98 2e-21
01_07_0285 - 42476767-42476832,42476990-42477603,42477821-424782... 94 2e-20
01_06_1455 + 37504175-37504231,37504357-37504750,37504865-375054... 94 3e-20
11_01_0403 + 3059650-3059709,3059807-3060200,3060275-3060930,306... 93 4e-20
03_05_0926 + 28871800-28871859,28871943-28872336,28872586-288731... 93 4e-20
10_08_0597 + 19089616-19089675,19089789-19090182,19090451-190910... 93 5e-20
05_01_0047 - 323097-323162,323287-323900,324233-324626,324718-32... 93 5e-20
03_06_0585 - 34912159-34912224,34912634-34913247,34913350-349137... 93 6e-20
05_04_0450 - 21356877-21356942,21357482-21358095,21358173-213585... 91 2e-19
12_01_0409 - 3230853-3230918,3231372-3231994,3232454-3232847,323... 87 2e-18
08_01_0254 + 2078380-2078392,2078487-2078578,2079579-2079698,207... 36 0.010
08_02_0441 - 17196352-17196536,17196780-17196906,17198018-171981... 34 0.023
04_04_1515 + 34117383-34117732,34117833-34117918,34118227-341182... 33 0.053
03_06_0192 + 32230953-32231030,32231130-32231485,32232250-322324... 31 0.21
01_01_1170 - 9318332-9318461,9318551-9318613,9318694-9318744,931... 28 1.5
05_03_0529 + 15048063-15048105,15048146-15048246,15051715-150522... 28 2.0
07_03_1226 - 24998276-24998375,24998728-24998849,24998936-249997... 27 2.6
11_01_0788 + 6599962-6602700 27 3.5
08_01_1052 + 10712380-10712545,10713229-10713386,10713495-10714199 27 3.5
07_01_0973 - 8193002-8193261,8193388-8193485,8194117-8194401,819... 27 3.5
06_03_0050 + 15980215-15981519 27 3.5
02_02_0520 + 11152718-11153600,11153736-11153917,11154160-111542... 27 3.5
01_06_0645 + 30826267-30826307,30826403-30826454,30826580-308266... 27 3.5
07_03_0363 + 17225472-17226778,17226910-17226917,17227313-172274... 27 4.6
02_02_0496 + 10958561-10958615,10959077-10959121,10959273-10959532 27 4.6
01_01_0292 - 2387653-2387711,2388061-2388684,2388814-2389104,238... 27 4.6
11_01_0791 + 6627961-6630702 26 6.1
09_04_0670 + 19348468-19348949,19351594-19351724,19352433-19353238 26 6.1
08_01_0442 + 3922402-3922707,3922940-3923816,3925741-3926831 26 6.1
04_04_0683 - 27234137-27234486,27234645-27234756,27234889-272349... 26 6.1
11_06_0130 - 20408835-20411771 26 8.0
06_03_0912 + 25896152-25896451,25896528-25897296,25897492-258976... 26 8.0
06_01_0066 - 554637-555548 26 8.0
03_05_0642 - 26346260-26346367,26347902-26348162,26348542-263498... 26 8.0
>12_02_1282 + 27528159-27529148,27529549-27529614
Length = 351
Score = 97.9 bits (233), Expect = 2e-21
Identities = 55/95 (57%), Positives = 64/95 (67%), Gaps = 2/95 (2%)
Frame = +2
Query: 47 VRDIKEKLCYVALDFEQEMATAASSSSLEKSTNSPTVKSSQSETKGSVAQRA--LFXSPR 220
VRD+KEKL Y+ALDF+QEMATAA+ SS+EKS P Q T G+ R + P
Sbjct: 211 VRDVKEKLSYIALDFDQEMATAATGSSVEKSYELP---DGQVITIGAERFRCPEVLFQPS 267
Query: 221 FXWVWNACGSHETTYNSIMKCDVDIRQDLYANTVL 325
F + A G HETTYNSIMKCDVDIR+DLY N VL
Sbjct: 268 FVGM-EAAGIHETTYNSIMKCDVDIRKDLYGNIVL 301
>01_07_0285 -
42476767-42476832,42476990-42477603,42477821-42478214,
42478301-42478360
Length = 377
Score = 94.3 bits (224), Expect = 2e-20
Identities = 55/95 (57%), Positives = 63/95 (66%), Gaps = 2/95 (2%)
Frame = +2
Query: 47 VRDIKEKLCYVALDFEQEMATAASSSSLEKSTNSPTVKSSQSETKGSVAQRA--LFXSPR 220
VRDIKEKL YVALD+EQE+ TA +SSS+EKS P Q T GS R + P
Sbjct: 211 VRDIKEKLAYVALDYEQELETAKNSSSIEKSYELP---DGQVITIGSERFRCPEVLFQPS 267
Query: 221 FXWVWNACGSHETTYNSIMKCDVDIRQDLYANTVL 325
+ +A G HETTYNSIMKCDVDIR+DLY N VL
Sbjct: 268 MIGMESA-GIHETTYNSIMKCDVDIRKDLYGNVVL 301
>01_06_1455 +
37504175-37504231,37504357-37504750,37504865-37505478,
37506021-37506086
Length = 376
Score = 93.9 bits (223), Expect = 3e-20
Identities = 55/95 (57%), Positives = 62/95 (65%), Gaps = 2/95 (2%)
Frame = +2
Query: 47 VRDIKEKLCYVALDFEQEMATAASSSSLEKSTNSPTVKSSQSETKGSVAQRA--LFXSPR 220
VRDIKEKL YVALD+EQE+ TA SSSS+EKS P Q T G+ R + P
Sbjct: 210 VRDIKEKLAYVALDYEQELDTARSSSSIEKSYELP---DGQVITIGAERFRCPEVLFQPS 266
Query: 221 FXWVWNACGSHETTYNSIMKCDVDIRQDLYANTVL 325
F + A G HE TYNSIMKCDVDIR+DLY N VL
Sbjct: 267 FIGM-EAPGIHEATYNSIMKCDVDIRKDLYGNVVL 300
>11_01_0403 +
3059650-3059709,3059807-3060200,3060275-3060930,
3060979-3061044
Length = 391
Score = 93.5 bits (222), Expect = 4e-20
Identities = 53/93 (56%), Positives = 60/93 (64%)
Frame = +2
Query: 47 VRDIKEKLCYVALDFEQEMATAASSSSLEKSTNSPTVKSSQSETKGSVAQRALFXSPRFX 226
VRDIKEKL YVALD+EQE+ A SSSS+EKS P + + LF P F
Sbjct: 211 VRDIKEKLAYVALDYEQELEAAKSSSSVEKSYELPDGQVITIGAERFRCPEVLF-QPSFI 269
Query: 227 WVWNACGSHETTYNSIMKCDVDIRQDLYANTVL 325
+ A G HETTYNSIMKCDVDIR+DLY N VL
Sbjct: 270 GM-EAPGIHETTYNSIMKCDVDIRKDLYGNIVL 301
>03_05_0926 +
28871800-28871859,28871943-28872336,28872586-28873199,
28873281-28873346
Length = 377
Score = 93.5 bits (222), Expect = 4e-20
Identities = 51/93 (54%), Positives = 61/93 (65%)
Frame = +2
Query: 47 VRDIKEKLCYVALDFEQEMATAASSSSLEKSTNSPTVKSSQSETKGSVAQRALFXSPRFX 226
VRD+KEKL Y+ALD++QEM TA +SSS+EKS P + + LF P F
Sbjct: 211 VRDMKEKLSYIALDYDQEMETAKTSSSVEKSYELPDGQVITIGAERFRCPEVLF-QPSFI 269
Query: 227 WVWNACGSHETTYNSIMKCDVDIRQDLYANTVL 325
+ A G HETTYNSIMKCDVDIR+DLY N VL
Sbjct: 270 GM-EAAGIHETTYNSIMKCDVDIRKDLYGNIVL 301
>10_08_0597 +
19089616-19089675,19089789-19090182,19090451-19091064,
19091160-19091225
Length = 377
Score = 93.1 bits (221), Expect = 5e-20
Identities = 55/95 (57%), Positives = 62/95 (65%), Gaps = 2/95 (2%)
Frame = +2
Query: 47 VRDIKEKLCYVALDFEQEMATAASSSSLEKSTNSPTVKSSQSETKGSVAQRA--LFXSPR 220
VRDIKEKL YVALD+EQE+ TA SSSS+EKS P Q T G+ R + P
Sbjct: 211 VRDIKEKLAYVALDYEQELETAKSSSSVEKSYELP---DGQVITIGAERFRCPEVMFQPS 267
Query: 221 FXWVWNACGSHETTYNSIMKCDVDIRQDLYANTVL 325
+ A G HETTYNSIMKCDVDIR+DLY N VL
Sbjct: 268 LIGM-EAPGIHETTYNSIMKCDVDIRKDLYGNIVL 301
>05_01_0047 -
323097-323162,323287-323900,324233-324626,324718-324777
Length = 377
Score = 93.1 bits (221), Expect = 5e-20
Identities = 52/93 (55%), Positives = 60/93 (64%)
Frame = +2
Query: 47 VRDIKEKLCYVALDFEQEMATAASSSSLEKSTNSPTVKSSQSETKGSVAQRALFXSPRFX 226
VRDIKEKL YVALD+EQE+ TA +SSS+EKS P + + LF P
Sbjct: 211 VRDIKEKLAYVALDYEQELETAKNSSSVEKSYELPDGQVITIGAERFRCPEVLF-QPSMI 269
Query: 227 WVWNACGSHETTYNSIMKCDVDIRQDLYANTVL 325
+ A G HETTYNSIMKCDVDIR+DLY N VL
Sbjct: 270 GM-EAAGIHETTYNSIMKCDVDIRKDLYGNIVL 301
>03_06_0585 -
34912159-34912224,34912634-34913247,34913350-34913734,
34913824-34913883
Length = 374
Score = 92.7 bits (220), Expect = 6e-20
Identities = 52/93 (55%), Positives = 60/93 (64%)
Frame = +2
Query: 47 VRDIKEKLCYVALDFEQEMATAASSSSLEKSTNSPTVKSSQSETKGSVAQRALFXSPRFX 226
VRDIKEKL Y+ALD+EQE+ TA SSSS+EKS P + + LF P
Sbjct: 208 VRDIKEKLAYIALDYEQELETAKSSSSVEKSYELPDGQVITIGAERFRCPEVLF-QPSLI 266
Query: 227 WVWNACGSHETTYNSIMKCDVDIRQDLYANTVL 325
+ A G HETTYNSIMKCDVDIR+DLY N VL
Sbjct: 267 GM-EAPGIHETTYNSIMKCDVDIRKDLYGNIVL 298
>05_04_0450 -
21356877-21356942,21357482-21358095,21358173-21358566,
21358648-21358704
Length = 376
Score = 90.6 bits (215), Expect = 2e-19
Identities = 53/95 (55%), Positives = 61/95 (64%), Gaps = 2/95 (2%)
Frame = +2
Query: 47 VRDIKEKLCYVALDFEQEMATAASSSSLEKSTNSPTVKSSQSETKGSVAQRA--LFXSPR 220
VRDIKEKL YVALD+EQE+ T+ SSSS+EKS P Q T GS R + P
Sbjct: 210 VRDIKEKLAYVALDYEQELETSRSSSSVEKSYEMP---DGQVITIGSERFRCPEVLFQPS 266
Query: 221 FXWVWNACGSHETTYNSIMKCDVDIRQDLYANTVL 325
+ + G HE TYNSIMKCDVDIR+DLY N VL
Sbjct: 267 LVGM-ESPGIHEATYNSIMKCDVDIRKDLYGNVVL 300
>12_01_0409 -
3230853-3230918,3231372-3231994,3232454-3232847,
3233000-3233059
Length = 380
Score = 87.4 bits (207), Expect = 2e-18
Identities = 52/96 (54%), Positives = 60/96 (62%), Gaps = 3/96 (3%)
Frame = +2
Query: 47 VRDIKEKLCYVALDFEQEM---ATAASSSSLEKSTNSPTVKSSQSETKGSVAQRALFXSP 217
VRDIKEKL YVALD+EQE+ A A +SSS+EKS P + + LF P
Sbjct: 211 VRDIKEKLAYVALDYEQELNAAAAAKNSSSVEKSYELPDGQVITIGAERFRCPEVLF-QP 269
Query: 218 RFXWVWNACGSHETTYNSIMKCDVDIRQDLYANTVL 325
+ A G HETTYNSIMKCDVDIR+DLY N VL
Sbjct: 270 SLVGM-EAAGIHETTYNSIMKCDVDIRKDLYGNVVL 304
>08_01_0254 +
2078380-2078392,2078487-2078578,2079579-2079698,
2079924-2080097,2080184-2080257,2080847-2080927,
2081306-2081366,2081437-2081486,2082278-2082332,
2082599-2082676,2082757-2082810,2083703-2083756,
2083846-2083906,2084229-2084280,2085118-2085184,
2085393-2085452,2085546-2085608,2085752-2085814,
2086337-2086401,2086620-2086688,2086742-2086847
Length = 503
Score = 35.5 bits (78), Expect = 0.010
Identities = 16/32 (50%), Positives = 21/32 (65%)
Frame = +1
Query: 124 LPREVYELPDGQVITIGNERFRCPEGSLXQPS 219
+P YELPDGQ I +G +RF+ P+ L PS
Sbjct: 329 VPTTSYELPDGQTIEVGADRFKIPD-ILFNPS 359
Score = 25.8 bits (54), Expect = 8.0
Identities = 9/20 (45%), Positives = 17/20 (85%)
Frame = +2
Query: 266 NSIMKCDVDIRQDLYANTVL 325
+S+ +CDVDIR++L ++ +L
Sbjct: 385 DSVNRCDVDIRKELLSSILL 404
>08_02_0441 -
17196352-17196536,17196780-17196906,17198018-17198101,
17198282-17198348,17198575-17198633,17199211-17199336,
17199406-17199474,17199545-17199653,17199692-17199760,
17199876-17199979,17200518-17200567,17200696-17200774,
17200867-17200938,17201083-17201217,17201311-17201421,
17202088-17202129
Length = 495
Score = 34.3 bits (75), Expect = 0.023
Identities = 13/20 (65%), Positives = 16/20 (80%)
Frame = +1
Query: 139 YELPDGQVITIGNERFRCPE 198
Y LPDG+VI +G ERF+ PE
Sbjct: 256 YTLPDGRVIKVGTERFQAPE 275
Score = 26.6 bits (56), Expect = 4.6
Identities = 10/13 (76%), Positives = 13/13 (100%)
Frame = +2
Query: 47 VRDIKEKLCYVAL 85
VR+IKEKLCY++L
Sbjct: 210 VREIKEKLCYLSL 222
>04_04_1515 +
34117383-34117732,34117833-34117918,34118227-34118297,
34118457-34118524,34118692-34118753,34119010-34119107,
34119545-34119626,34119935-34120077,34120233-34120381,
34120461-34120594,34120714-34120832,34120926-34121014,
34121398-34121515
Length = 522
Score = 33.1 bits (72), Expect = 0.053
Identities = 14/18 (77%), Positives = 15/18 (83%)
Frame = +2
Query: 47 VRDIKEKLCYVALDFEQE 100
VR IKEKLCYVA D+E E
Sbjct: 315 VRTIKEKLCYVAADYEAE 332
>03_06_0192 +
32230953-32231030,32231130-32231485,32232250-32232425,
32233857-32234038,32234260-32234443,32235192-32235259,
32235343-32235495
Length = 398
Score = 31.1 bits (67), Expect = 0.21
Identities = 19/35 (54%), Positives = 23/35 (65%)
Frame = +1
Query: 133 EVYELPDGQVITIGNERFRCPEGSLXQPSXXLGME 237
E + LPDGQVITI ER+ E +L QP LG+E
Sbjct: 256 ERHTLPDGQVITIEKERYIVGE-ALFQP-HILGLE 288
>01_01_1170 -
9318332-9318461,9318551-9318613,9318694-9318744,
9318837-9318921,9319005-9319068,9319139-9319340,
9319808-9320502
Length = 429
Score = 28.3 bits (60), Expect = 1.5
Identities = 12/27 (44%), Positives = 18/27 (66%)
Frame = +2
Query: 47 VRDIKEKLCYVALDFEQEMATAASSSS 127
+ D KEKLC+V+LD ++ A SS+
Sbjct: 210 IDDAKEKLCFVSLDVPGDLRLARLSSN 236
>05_03_0529 +
15048063-15048105,15048146-15048246,15051715-15052258,
15052303-15052570,15053510-15053681,15053783-15054059,
15054243-15054310,15054358-15054489,15055129-15055227
Length = 567
Score = 27.9 bits (59), Expect = 2.0
Identities = 11/26 (42%), Positives = 17/26 (65%)
Frame = +3
Query: 174 KRKVPLPRGLSSXALXSXGYGTRVAA 251
+RK+PLPRG+ A+ G + +AA
Sbjct: 451 ERKMPLPRGIQHNAMVHQGLSSLIAA 476
>07_03_1226 -
24998276-24998375,24998728-24998849,24998936-24999702,
25000447-25000618
Length = 386
Score = 27.5 bits (58), Expect = 2.6
Identities = 12/23 (52%), Positives = 13/23 (56%)
Frame = +1
Query: 19 PPGCRNRHEGSRHQGETLLRCAR 87
PP R R G RH GE +LR R
Sbjct: 177 PPQRRRRGRGRRHHGELVLRVQR 199
>11_01_0788 + 6599962-6602700
Length = 912
Score = 27.1 bits (57), Expect = 3.5
Identities = 11/29 (37%), Positives = 16/29 (55%)
Frame = +2
Query: 14 WIPRAAGIGTRVRDIKEKLCYVALDFEQE 100
WI G+ V+D+ +K Y AL E+E
Sbjct: 71 WIVEVRGLAHHVQDVMDKYSYHALMLEEE 99
>08_01_1052 + 10712380-10712545,10713229-10713386,10713495-10714199
Length = 342
Score = 27.1 bits (57), Expect = 3.5
Identities = 12/23 (52%), Positives = 14/23 (60%)
Frame = -3
Query: 283 TLHDGVVCRLVAATRVPYPXEXR 215
TLH G VCR++AA YP R
Sbjct: 265 TLHRGEVCRILAALFPGYPVPTR 287
>07_01_0973 -
8193002-8193261,8193388-8193485,8194117-8194401,
8195559-8195773,8196549-8197058
Length = 455
Score = 27.1 bits (57), Expect = 3.5
Identities = 20/39 (51%), Positives = 22/39 (56%), Gaps = 1/39 (2%)
Frame = +2
Query: 104 ATAASSSSLEKSTNSPTVKSSQ-SETKGSVAQRALFXSP 217
A AASSSS ST+S T SSQ S T+G F SP
Sbjct: 7 AAAASSSS--SSTSSTTSSSSQSSSTRGGYMLSDRFYSP 43
>06_03_0050 + 15980215-15981519
Length = 434
Score = 27.1 bits (57), Expect = 3.5
Identities = 17/54 (31%), Positives = 24/54 (44%), Gaps = 2/54 (3%)
Frame = +1
Query: 73 LRCARLRAGDGHRCLQQLPREVYELPDGQVITIGNERF--RCPEGSLXQPSXXL 228
LR RL + G++ Q+P + LPD + +GN P G L S L
Sbjct: 134 LRRLRLLSMSGNQLTGQIPESLAGLPDLHTLDLGNNHLDGSIPSGLLLPSSQSL 187
>02_02_0520 +
11152718-11153600,11153736-11153917,11154160-11154249,
11154343-11154627,11154776-11154994,11155112-11155339
Length = 628
Score = 27.1 bits (57), Expect = 3.5
Identities = 10/19 (52%), Positives = 16/19 (84%), Gaps = 1/19 (5%)
Frame = +1
Query: 142 ELPDGQ-VITIGNERFRCP 195
+L G+ V+++GNE+FRCP
Sbjct: 25 DLKSGKPVVSLGNEKFRCP 43
>01_06_0645 +
30826267-30826307,30826403-30826454,30826580-30826659,
30826804-30826882,30826962-30827045,30827131-30827276,
30827362-30827628,30827825-30827907,30828162-30828271,
30828544-30829159,30829471-30829620,30829700-30829800
Length = 602
Score = 27.1 bits (57), Expect = 3.5
Identities = 15/30 (50%), Positives = 19/30 (63%)
Frame = +2
Query: 89 FEQEMATAASSSSLEKSTNSPTVKSSQSET 178
F+Q AT+ S S E S + PT KSSQ +T
Sbjct: 364 FKQSFATSFPSDS-EFSVHDPTSKSSQGKT 392
>07_03_0363 +
17225472-17226778,17226910-17226917,17227313-17227488,
17227822-17227882,17227955-17228053,17228155-17228249,
17228411-17228482,17228668-17228735,17228934-17229390,
17229486-17229596
Length = 817
Score = 26.6 bits (56), Expect = 4.6
Identities = 14/38 (36%), Positives = 23/38 (60%)
Frame = +2
Query: 92 EQEMATAASSSSLEKSTNSPTVKSSQSETKGSVAQRAL 205
E +AT ++ LEK+ + VKS++ E K +V Q+ L
Sbjct: 313 ESSVATEKENAILEKTASDGAVKSAEHENK-TVEQKTL 349
>02_02_0496 + 10958561-10958615,10959077-10959121,10959273-10959532
Length = 119
Score = 26.6 bits (56), Expect = 4.6
Identities = 15/43 (34%), Positives = 19/43 (44%)
Frame = +1
Query: 22 PGCRNRHEGSRHQGETLLRCARLRAGDGHRCLQQLPREVYELP 150
P C G RH E ++ AR R G+G R L + LP
Sbjct: 46 PVCLALPAGCRHASEWMVHRARQRVGEGVRLDNGLANRDWYLP 88
>01_01_0292 -
2387653-2387711,2388061-2388684,2388814-2389104,
2389338-2389390,2390496-2390968,2391090-2391432,
2391793-2391911,2392081-2392512,2392657-2392747,
2392833-2392942,2393681-2393875,2394581-2394622,
2395144-2395268,2395856-2395926,2396047-2396147
Length = 1042
Score = 26.6 bits (56), Expect = 4.6
Identities = 13/18 (72%), Positives = 14/18 (77%)
Frame = +1
Query: 163 ITIGNERFRCPEGSLXQP 216
I+IG ERFRCPE L QP
Sbjct: 575 ISIGIERFRCPE-ILFQP 591
>11_01_0791 + 6627961-6630702
Length = 913
Score = 26.2 bits (55), Expect = 6.1
Identities = 17/61 (27%), Positives = 23/61 (37%)
Frame = +2
Query: 14 WIPRAAGIGTRVRDIKEKLCYVALDFEQEMATAASSSSLEKSTNSPTVKSSQSETKGSVA 193
WI + RV DI +K Y A +QE + + V S + KG V
Sbjct: 72 WIDELRKLAYRVEDIMDKYSYYACQRQQEGSVMRCVRGAHYAGVFSEVASEVMKIKGDVE 131
Query: 194 Q 196
Q
Sbjct: 132 Q 132
>09_04_0670 + 19348468-19348949,19351594-19351724,19352433-19353238
Length = 472
Score = 26.2 bits (55), Expect = 6.1
Identities = 11/29 (37%), Positives = 17/29 (58%)
Frame = +3
Query: 165 HNRKRKVPLPRGLSSXALXSXGYGTRVAA 251
HNR+R+ P +SS + + GTR A+
Sbjct: 182 HNRRRRKPQADSMSSGSFMTSQQGTRFAS 210
>08_01_0442 + 3922402-3922707,3922940-3923816,3925741-3926831
Length = 757
Score = 26.2 bits (55), Expect = 6.1
Identities = 14/33 (42%), Positives = 20/33 (60%), Gaps = 2/33 (6%)
Frame = +2
Query: 86 DFEQEMAT--AASSSSLEKSTNSPTVKSSQSET 178
DF +T ++SSSS STNSPT ++ S +
Sbjct: 35 DFSSPPSTTSSSSSSSSSSSTNSPTATAASSSS 67
>04_04_0683 -
27234137-27234486,27234645-27234756,27234889-27234961,
27235071-27235491,27236148-27236403
Length = 403
Score = 26.2 bits (55), Expect = 6.1
Identities = 13/45 (28%), Positives = 22/45 (48%)
Frame = +2
Query: 86 DFEQEMATAASSSSLEKSTNSPTVKSSQSETKGSVAQRALFXSPR 220
D E+ ++S+ L KST +P + + + SV R SP+
Sbjct: 253 DSEETRVKTSASNRLTKSTMNPLKRPHDTHFQSSVELRGTMRSPK 297
>11_06_0130 - 20408835-20411771
Length = 978
Score = 25.8 bits (54), Expect = 8.0
Identities = 10/26 (38%), Positives = 18/26 (69%)
Frame = +1
Query: 100 DGHRCLQQLPREVYELPDGQVITIGN 177
+G+R Q+PR + ELP Q +++G+
Sbjct: 189 EGNRLSGQIPRSLAELPSIQELSLGS 214
>06_03_0912 +
25896152-25896451,25896528-25897296,25897492-25897658,
25898932-25901013,25901155-25901730,25904503-25905648,
25907056-25908693
Length = 2225
Score = 25.8 bits (54), Expect = 8.0
Identities = 13/27 (48%), Positives = 17/27 (62%)
Frame = +2
Query: 47 VRDIKEKLCYVALDFEQEMATAASSSS 127
VRD+ +KL VA D E +A SSS+
Sbjct: 65 VRDLLKKLKAVAYDIEDRLAVYESSSN 91
>06_01_0066 - 554637-555548
Length = 303
Score = 25.8 bits (54), Expect = 8.0
Identities = 14/35 (40%), Positives = 18/35 (51%)
Frame = +2
Query: 26 AAGIGTRVRDIKEKLCYVALDFEQEMATAASSSSL 130
AAG +RD K+ + ALD Q A A S+ L
Sbjct: 267 AAGASLVIRDYKDHKLWAALDKLQAAAAAQSNGQL 301
>03_05_0642 - 26346260-26346367,26347902-26348162,26348542-26349849,
26349960-26350178,26350241-26350300,26352159-26352215,
26352945-26353029,26353486-26353843,26353931-26355170
Length = 1231
Score = 25.8 bits (54), Expect = 8.0
Identities = 14/50 (28%), Positives = 24/50 (48%)
Frame = +2
Query: 104 ATAASSSSLEKSTNSPTVKSSQSETKGSVAQRALFXSPRFXWVWNACGSH 253
A S + ++S+ SPT + SQ++T+ AQ+ + V G H
Sbjct: 1165 AKRPGSRTTQRSSTSPTTEPSQTKTRRPKAQQIVLDVAHAVEVSTGGGGH 1214
Database: rice
Posted date: Oct 4, 2007 10:57 AM
Number of letters in database: 14,793,348
Number of sequences in database: 37,544
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 8,562,086
Number of Sequences: 37544
Number of extensions: 145452
Number of successful extensions: 504
Number of sequences better than 10.0: 34
Number of HSP's better than 10.0 without gapping: 474
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 484
length of database: 14,793,348
effective HSP length: 72
effective length of database: 12,090,180
effective search space used: 435246480
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
- SilkBase 1999-2023 -