Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= S06A01NCLL0023_K14
(327 letters)
Database: celegans
27,780 sequences; 12,740,198 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
Z81584-5|CAB04675.1| 376|Caenorhabditis elegans Hypothetical pr... 110 2e-25
X16799-1|CAA34720.1| 376|Caenorhabditis elegans actin protein. 110 2e-25
X16797-1|CAA34718.1| 376|Caenorhabditis elegans actin protein. 110 2e-25
U64601-7|AAK77622.1| 332|Caenorhabditis elegans Actin protein 4... 110 2e-25
U64601-6|AAT92068.1| 362|Caenorhabditis elegans Actin protein 4... 110 2e-25
U64601-5|AAB04575.1| 376|Caenorhabditis elegans Actin protein 4... 110 2e-25
Z81584-6|CAB04678.1| 376|Caenorhabditis elegans Hypothetical pr... 109 3e-25
Z81584-4|CAB04676.1| 376|Caenorhabditis elegans Hypothetical pr... 109 3e-25
X16798-1|CAA34719.1| 375|Caenorhabditis elegans actin protein. 109 3e-25
X16796-1|CAA34717.1| 376|Caenorhabditis elegans actin protein. 109 3e-25
Z83241-1|CAB05817.1| 375|Caenorhabditis elegans Hypothetical pr... 100 3e-22
AL132949-19|CAB70110.2| 374|Caenorhabditis elegans Hypothetical... 50 3e-07
Z71181-1|CAA94894.1| 395|Caenorhabditis elegans Hypothetical pr... 47 4e-06
U40799-8|AAA81487.1| 552|Caenorhabditis elegans Hypothetical pr... 35 0.012
AC024200-9|AAF36012.1| 425|Caenorhabditis elegans Arp2/3 comple... 31 0.26
U55372-2|AAA98001.1| 980|Caenorhabditis elegans Hypothetical pr... 28 1.4
AF480439-1|AAM76083.1| 1037|Caenorhabditis elegans dicer-related... 28 1.4
AF036696-4|AAB88350.1| 1037|Caenorhabditis elegans Dicer related... 28 1.4
Z70750-10|CAA94746.1| 439|Caenorhabditis elegans Hypothetical p... 28 1.8
AY551965-1|AAS65429.1| 2395|Caenorhabditis elegans Swi/Snf famil... 28 1.8
AL132904-26|CAC35851.3| 2395|Caenorhabditis elegans Hypothetical... 28 1.8
AF016421-6|AAT92074.1| 984|Caenorhabditis elegans Hypothetical ... 28 1.8
AF016421-5|AAO12429.1| 1008|Caenorhabditis elegans Hypothetical ... 28 1.8
AF016421-4|AAC25789.1| 1067|Caenorhabditis elegans Hypothetical ... 28 1.8
AF016421-3|AAM45374.1| 1051|Caenorhabditis elegans Hypothetical ... 28 1.8
U55372-1|AAA98002.2| 816|Caenorhabditis elegans Hypothetical pr... 27 2.4
AC084158-36|AAK68577.1| 1219|Caenorhabditis elegans Hypothetical... 27 4.2
Z81134-3|CAB03446.1| 991|Caenorhabditis elegans Hypothetical pr... 26 5.6
Z68752-7|CAA92982.2| 693|Caenorhabditis elegans Hypothetical pr... 26 5.6
U28742-2|AAA68332.2| 925|Caenorhabditis elegans Adaptin, alpha ... 26 7.4
AL023838-4|CAA19504.1| 218|Caenorhabditis elegans Hypothetical ... 26 7.4
U97016-4|AAN84886.1| 2692|Caenorhabditis elegans Lethal protein ... 25 9.7
U97016-3|AAN84885.1| 2695|Caenorhabditis elegans Lethal protein ... 25 9.7
U41110-1|AAA82415.1| 506|Caenorhabditis elegans Hypothetical pr... 25 9.7
U29244-14|AAC71095.1| 774|Caenorhabditis elegans Fzo (fzo mitoc... 25 9.7
AL031621-3|CAA20935.2| 740|Caenorhabditis elegans Hypothetical ... 25 9.7
AF039713-13|AAB96719.2| 690|Caenorhabditis elegans Hypothetical... 25 9.7
>Z81584-5|CAB04675.1| 376|Caenorhabditis elegans Hypothetical
protein T04C12.5 protein.
Length = 376
Score = 110 bits (265), Expect = 2e-25
Identities = 61/93 (65%), Positives = 68/93 (73%)
Frame = +2
Query: 47 VRDIKEKLCYVALDFEQEMATAASSSSLEKSTNSPTVKSSQSETKGSVAQRALFXSPRFX 226
VRDIKEKLCYVALDFEQEMATAASSSSLEKS P + + ALF P F
Sbjct: 210 VRDIKEKLCYVALDFEQEMATAASSSSLEKSYELPDGQVITVGNERFRCPEALF-QPSFL 268
Query: 227 WVWNACGSHETTYNSIMKCDVDIRQDLYANTVL 325
+ +A G HET+YNSIMKCD+DIR+DLYANTVL
Sbjct: 269 GMESA-GIHETSYNSIMKCDIDIRKDLYANTVL 300
>X16799-1|CAA34720.1| 376|Caenorhabditis elegans actin protein.
Length = 376
Score = 110 bits (265), Expect = 2e-25
Identities = 61/93 (65%), Positives = 68/93 (73%)
Frame = +2
Query: 47 VRDIKEKLCYVALDFEQEMATAASSSSLEKSTNSPTVKSSQSETKGSVAQRALFXSPRFX 226
VRDIKEKLCYVALDFEQEMATAASSSSLEKS P + + ALF P F
Sbjct: 210 VRDIKEKLCYVALDFEQEMATAASSSSLEKSYELPDGQVITVGNERFRCPEALF-QPSFL 268
Query: 227 WVWNACGSHETTYNSIMKCDVDIRQDLYANTVL 325
+ +A G HET+YNSIMKCD+DIR+DLYANTVL
Sbjct: 269 GMESA-GIHETSYNSIMKCDIDIRKDLYANTVL 300
>X16797-1|CAA34718.1| 376|Caenorhabditis elegans actin protein.
Length = 376
Score = 110 bits (265), Expect = 2e-25
Identities = 61/93 (65%), Positives = 68/93 (73%)
Frame = +2
Query: 47 VRDIKEKLCYVALDFEQEMATAASSSSLEKSTNSPTVKSSQSETKGSVAQRALFXSPRFX 226
VRDIKEKLCYVALDFEQEMATAASSSSLEKS P + + ALF P F
Sbjct: 210 VRDIKEKLCYVALDFEQEMATAASSSSLEKSYELPDGQVITVGNERFRCPEALF-QPSFL 268
Query: 227 WVWNACGSHETTYNSIMKCDVDIRQDLYANTVL 325
+ +A G HET+YNSIMKCD+DIR+DLYANTVL
Sbjct: 269 GMESA-GIHETSYNSIMKCDIDIRKDLYANTVL 300
>U64601-7|AAK77622.1| 332|Caenorhabditis elegans Actin protein 4,
isoform b protein.
Length = 332
Score = 110 bits (265), Expect = 2e-25
Identities = 61/93 (65%), Positives = 68/93 (73%)
Frame = +2
Query: 47 VRDIKEKLCYVALDFEQEMATAASSSSLEKSTNSPTVKSSQSETKGSVAQRALFXSPRFX 226
VRDIKEKLCYVALDFEQEMATAASSSSLEKS P + + ALF P F
Sbjct: 166 VRDIKEKLCYVALDFEQEMATAASSSSLEKSYELPDGQVITVGNERFRCPEALF-QPSFL 224
Query: 227 WVWNACGSHETTYNSIMKCDVDIRQDLYANTVL 325
+ +A G HET+YNSIMKCD+DIR+DLYANTVL
Sbjct: 225 GMESA-GIHETSYNSIMKCDIDIRKDLYANTVL 256
>U64601-6|AAT92068.1| 362|Caenorhabditis elegans Actin protein 4,
isoform c protein.
Length = 362
Score = 110 bits (265), Expect = 2e-25
Identities = 61/93 (65%), Positives = 68/93 (73%)
Frame = +2
Query: 47 VRDIKEKLCYVALDFEQEMATAASSSSLEKSTNSPTVKSSQSETKGSVAQRALFXSPRFX 226
VRDIKEKLCYVALDFEQEMATAASSSSLEKS P + + ALF P F
Sbjct: 196 VRDIKEKLCYVALDFEQEMATAASSSSLEKSYELPDGQVITVGNERFRCPEALF-QPSFL 254
Query: 227 WVWNACGSHETTYNSIMKCDVDIRQDLYANTVL 325
+ +A G HET+YNSIMKCD+DIR+DLYANTVL
Sbjct: 255 GMESA-GIHETSYNSIMKCDIDIRKDLYANTVL 286
>U64601-5|AAB04575.1| 376|Caenorhabditis elegans Actin protein 4,
isoform a protein.
Length = 376
Score = 110 bits (265), Expect = 2e-25
Identities = 61/93 (65%), Positives = 68/93 (73%)
Frame = +2
Query: 47 VRDIKEKLCYVALDFEQEMATAASSSSLEKSTNSPTVKSSQSETKGSVAQRALFXSPRFX 226
VRDIKEKLCYVALDFEQEMATAASSSSLEKS P + + ALF P F
Sbjct: 210 VRDIKEKLCYVALDFEQEMATAASSSSLEKSYELPDGQVITVGNERFRCPEALF-QPSFL 268
Query: 227 WVWNACGSHETTYNSIMKCDVDIRQDLYANTVL 325
+ +A G HET+YNSIMKCD+DIR+DLYANTVL
Sbjct: 269 GMESA-GIHETSYNSIMKCDIDIRKDLYANTVL 300
>Z81584-6|CAB04678.1| 376|Caenorhabditis elegans Hypothetical
protein T04C12.6 protein.
Length = 376
Score = 109 bits (263), Expect = 3e-25
Identities = 60/93 (64%), Positives = 68/93 (73%)
Frame = +2
Query: 47 VRDIKEKLCYVALDFEQEMATAASSSSLEKSTNSPTVKSSQSETKGSVAQRALFXSPRFX 226
VRDIKEKLCYVALDFEQEMATAASSSSLEKS P + + A+F P F
Sbjct: 210 VRDIKEKLCYVALDFEQEMATAASSSSLEKSYELPDGQVITVGNERFRCPEAMF-QPSFL 268
Query: 227 WVWNACGSHETTYNSIMKCDVDIRQDLYANTVL 325
+ +A G HET+YNSIMKCD+DIR+DLYANTVL
Sbjct: 269 GMESA-GIHETSYNSIMKCDIDIRKDLYANTVL 300
>Z81584-4|CAB04676.1| 376|Caenorhabditis elegans Hypothetical
protein T04C12.4 protein.
Length = 376
Score = 109 bits (263), Expect = 3e-25
Identities = 60/93 (64%), Positives = 68/93 (73%)
Frame = +2
Query: 47 VRDIKEKLCYVALDFEQEMATAASSSSLEKSTNSPTVKSSQSETKGSVAQRALFXSPRFX 226
VRDIKEKLCYVALDFEQEMATAASSSSLEKS P + + A+F P F
Sbjct: 210 VRDIKEKLCYVALDFEQEMATAASSSSLEKSYELPDGQVITVGNERFRCPEAMF-QPSFL 268
Query: 227 WVWNACGSHETTYNSIMKCDVDIRQDLYANTVL 325
+ +A G HET+YNSIMKCD+DIR+DLYANTVL
Sbjct: 269 GMESA-GIHETSYNSIMKCDIDIRKDLYANTVL 300
>X16798-1|CAA34719.1| 375|Caenorhabditis elegans actin protein.
Length = 375
Score = 109 bits (263), Expect = 3e-25
Identities = 60/93 (64%), Positives = 68/93 (73%)
Frame = +2
Query: 47 VRDIKEKLCYVALDFEQEMATAASSSSLEKSTNSPTVKSSQSETKGSVAQRALFXSPRFX 226
VRDIKEKLCYVALDFEQEMATAASSSSLEKS P + + A+F P F
Sbjct: 210 VRDIKEKLCYVALDFEQEMATAASSSSLEKSYELPDGQVITVGNERFRCPEAMF-QPSFL 268
Query: 227 WVWNACGSHETTYNSIMKCDVDIRQDLYANTVL 325
+ +A G HET+YNSIMKCD+DIR+DLYANTVL
Sbjct: 269 GMESA-GIHETSYNSIMKCDIDIRKDLYANTVL 300
>X16796-1|CAA34717.1| 376|Caenorhabditis elegans actin protein.
Length = 376
Score = 109 bits (263), Expect = 3e-25
Identities = 60/93 (64%), Positives = 68/93 (73%)
Frame = +2
Query: 47 VRDIKEKLCYVALDFEQEMATAASSSSLEKSTNSPTVKSSQSETKGSVAQRALFXSPRFX 226
VRDIKEKLCYVALDFEQEMATAASSSSLEKS P + + A+F P F
Sbjct: 210 VRDIKEKLCYVALDFEQEMATAASSSSLEKSYELPDGQVITVGNERFRCPEAMF-QPSFL 268
Query: 227 WVWNACGSHETTYNSIMKCDVDIRQDLYANTVL 325
+ +A G HET+YNSIMKCD+DIR+DLYANTVL
Sbjct: 269 GMESA-GIHETSYNSIMKCDIDIRKDLYANTVL 300
>Z83241-1|CAB05817.1| 375|Caenorhabditis elegans Hypothetical
protein T25C8.2 protein.
Length = 375
Score = 100 bits (239), Expect = 3e-22
Identities = 59/95 (62%), Positives = 64/95 (67%), Gaps = 2/95 (2%)
Frame = +2
Query: 47 VRDIKEKLCYVALDFEQEMATAASSSSLEKSTNSPTVKSSQSETKGSVAQRA--LFXSPR 220
VRDIKEKLCYVA DFE E+A AASSSSLEKS P Q T G+ R + P
Sbjct: 209 VRDIKEKLCYVAHDFESELAAAASSSSLEKSYELP---DGQVITIGNERFRCPEVLFQPA 265
Query: 221 FXWVWNACGSHETTYNSIMKCDVDIRQDLYANTVL 325
F + A G HETTY SIMKCDVDIR+DLYANTVL
Sbjct: 266 FIGMEGA-GIHETTYQSIMKCDVDIRKDLYANTVL 299
>AL132949-19|CAB70110.2| 374|Caenorhabditis elegans Hypothetical
protein Y53F4B.22 protein.
Length = 374
Score = 50.4 bits (115), Expect = 3e-07
Identities = 33/93 (35%), Positives = 43/93 (46%)
Frame = +2
Query: 47 VRDIKEKLCYVALDFEQEMATAASSSSLEKSTNSPTVKSSQSETKGSVAQRALFXSPRFX 226
VR++KE CY+ALD T ++S++ S P + A LF
Sbjct: 213 VREMKENACYLALD-----PTKVENNSVKSSYALPDTTKIEISNSLFRAPEVLFKPDLIG 267
Query: 227 WVWNACGSHETTYNSIMKCDVDIRQDLYANTVL 325
W G SIMKCDVD+RQ LY+N VL
Sbjct: 268 TEWP--GMAHVVNQSIMKCDVDLRQTLYSNIVL 298
>Z71181-1|CAA94894.1| 395|Caenorhabditis elegans Hypothetical
protein K07C5.1 protein.
Length = 395
Score = 46.8 bits (106), Expect = 4e-06
Identities = 32/93 (34%), Positives = 43/93 (46%)
Frame = +2
Query: 47 VRDIKEKLCYVALDFEQEMATAASSSSLEKSTNSPTVKSSQSETKGSVAQRALFXSPRFX 226
VR +KEKLCY+A D EQE A ++ L + P + + + A LF P
Sbjct: 213 VRQMKEKLCYIAYDVEQEERLALETTVLSQQYTLPDGRVIRLGGERFEAPEILF-QPHLI 271
Query: 227 WVWNACGSHETTYNSIMKCDVDIRQDLYANTVL 325
V A G E + I D+D R D Y + VL
Sbjct: 272 NVEKA-GLSELLFGCIQASDIDTRLDFYKHIVL 303
>U40799-8|AAA81487.1| 552|Caenorhabditis elegans Hypothetical
protein F42C5.9 protein.
Length = 552
Score = 35.1 bits (77), Expect = 0.012
Identities = 23/91 (25%), Positives = 44/91 (48%), Gaps = 3/91 (3%)
Frame = +2
Query: 62 EKLCYVALDFEQEMATAASSS--SLEKSTNSPTVKSS-QSETKGSVAQRALFXSPRFXWV 232
E+ YV D+++E + + SL+ T SP +++ + + LF + W
Sbjct: 389 EQTTYVPEDYQKEEKSENKETRISLDAFTPSPGMQTRFDIDNSRFLCTEGLFKPKK--WG 446
Query: 233 WNACGSHETTYNSIMKCDVDIRQDLYANTVL 325
+ G H+ + +I++C +D R+ LY N L
Sbjct: 447 LDTKGLHQLIHEAILQCPIDSRRTLYRNIYL 477
>AC024200-9|AAF36012.1| 425|Caenorhabditis elegans Arp2/3 complex
component protein 1 protein.
Length = 425
Score = 30.7 bits (66), Expect = 0.26
Identities = 28/95 (29%), Positives = 36/95 (37%), Gaps = 5/95 (5%)
Frame = +2
Query: 56 IKEKLCYVALDFEQEMAT----AASSSSLEKSTNSPTVKSSQSETKGS-VAQRALFXSPR 220
IKEK CYV D +E AA NS T K + +F P
Sbjct: 234 IKEKFCYVCPDVMKEFVKYDTDAAKWLRTYDGINSITKKPFNVDVGYERFLGPEIFFHPE 293
Query: 221 FXWVWNACGSHETTYNSIMKCDVDIRQDLYANTVL 325
F +T I +C +D+R+ LY N VL
Sbjct: 294 FCNPEFTTPISDTIDTLIQQCPIDVRRGLYENIVL 328
>U55372-2|AAA98001.1| 980|Caenorhabditis elegans Hypothetical
protein C02G6.1 protein.
Length = 980
Score = 28.3 bits (60), Expect = 1.4
Identities = 10/29 (34%), Positives = 19/29 (65%)
Frame = -1
Query: 198 LWATEPFVSDCDDLTVGEFVDFSRELLEA 112
+W+ E ++ CD +T+ F+RE+L+A
Sbjct: 649 VWSKEQLLAVCDSVTLENVQGFAREMLQA 677
>AF480439-1|AAM76083.1| 1037|Caenorhabditis elegans dicer-related
helicase protein.
Length = 1037
Score = 28.3 bits (60), Expect = 1.4
Identities = 18/59 (30%), Positives = 32/59 (54%), Gaps = 2/59 (3%)
Frame = +2
Query: 47 VRDIKEKLCYVALDFEQEMATAASSSSLEKSTNSPTVKSSQSETKGSVAQR--ALFXSP 217
+R+ +E+LC VAL + + TA + S K+ + + E++ S +R ALF +P
Sbjct: 293 LRNYQEELCQVALQGKNTIVTAPTGSG--KTVIAANIIKEHFESRSSEGKRFKALFMTP 349
>AF036696-4|AAB88350.1| 1037|Caenorhabditis elegans Dicer related
helicase protein 1 protein.
Length = 1037
Score = 28.3 bits (60), Expect = 1.4
Identities = 18/59 (30%), Positives = 32/59 (54%), Gaps = 2/59 (3%)
Frame = +2
Query: 47 VRDIKEKLCYVALDFEQEMATAASSSSLEKSTNSPTVKSSQSETKGSVAQR--ALFXSP 217
+R+ +E+LC VAL + + TA + S K+ + + E++ S +R ALF +P
Sbjct: 293 LRNYQEELCQVALQGKNTIVTAPTGSG--KTVIAANIIKEHFESRSSEGKRFKALFMTP 349
>Z70750-10|CAA94746.1| 439|Caenorhabditis elegans Hypothetical
protein C50F4.12 protein.
Length = 439
Score = 27.9 bits (59), Expect = 1.8
Identities = 17/63 (26%), Positives = 27/63 (42%)
Frame = +1
Query: 70 LLRCARLRAGDGHRCLQQLPREVYELPDGQVITIGNERFRCPEGSLXQPSXXLGMERVWQ 249
+LRC+ H L++L R Y+L + + I PEGS + + +E
Sbjct: 355 ILRCSLSVIKSRHDFLKRLGRANYQLAEKKESKIDISEVTDPEGSSKESCDLVSLEHFLH 414
Query: 250 PRD 258
P D
Sbjct: 415 PSD 417
>AY551965-1|AAS65429.1| 2395|Caenorhabditis elegans Swi/Snf family
ATPase protein.
Length = 2395
Score = 27.9 bits (59), Expect = 1.8
Identities = 18/67 (26%), Positives = 31/67 (46%)
Frame = +2
Query: 101 MATAASSSSLEKSTNSPTVKSSQSETKGSVAQRALFXSPRFXWVWNACGSHETTYNSIMK 280
++T +S ++ S P+++ QS + G +Q+ L S N H+ YNS
Sbjct: 1960 LSTISSVAAAATSGPLPSIQHLQSSSTGLGSQQNLQNSHNSEQRNNVQNMHQNQYNSSQN 2019
Query: 281 CDVDIRQ 301
+ IRQ
Sbjct: 2020 PPIPIRQ 2026
>AL132904-26|CAC35851.3| 2395|Caenorhabditis elegans Hypothetical
protein Y111B2A.22 protein.
Length = 2395
Score = 27.9 bits (59), Expect = 1.8
Identities = 18/67 (26%), Positives = 31/67 (46%)
Frame = +2
Query: 101 MATAASSSSLEKSTNSPTVKSSQSETKGSVAQRALFXSPRFXWVWNACGSHETTYNSIMK 280
++T +S ++ S P+++ QS + G +Q+ L S N H+ YNS
Sbjct: 1960 LSTISSVAAAATSGPLPSIQHLQSSSTGLGSQQNLQNSHNSEQRNNVQNMHQNQYNSSQN 2019
Query: 281 CDVDIRQ 301
+ IRQ
Sbjct: 2020 PPIPIRQ 2026
>AF016421-6|AAT92074.1| 984|Caenorhabditis elegans Hypothetical
protein F44E7.4d protein.
Length = 984
Score = 27.9 bits (59), Expect = 1.8
Identities = 9/29 (31%), Positives = 20/29 (68%)
Frame = -1
Query: 198 LWATEPFVSDCDDLTVGEFVDFSRELLEA 112
+W+ E ++ CD +T+ + F++E+L+A
Sbjct: 735 VWSKEQLLAVCDSVTLEDVQGFAKEMLQA 763
>AF016421-5|AAO12429.1| 1008|Caenorhabditis elegans Hypothetical
protein F44E7.4c protein.
Length = 1008
Score = 27.9 bits (59), Expect = 1.8
Identities = 9/29 (31%), Positives = 20/29 (68%)
Frame = -1
Query: 198 LWATEPFVSDCDDLTVGEFVDFSRELLEA 112
+W+ E ++ CD +T+ + F++E+L+A
Sbjct: 676 VWSKEQLLAVCDSVTLEDVQGFAKEMLQA 704
>AF016421-4|AAC25789.1| 1067|Caenorhabditis elegans Hypothetical
protein F44E7.4a protein.
Length = 1067
Score = 27.9 bits (59), Expect = 1.8
Identities = 9/29 (31%), Positives = 20/29 (68%)
Frame = -1
Query: 198 LWATEPFVSDCDDLTVGEFVDFSRELLEA 112
+W+ E ++ CD +T+ + F++E+L+A
Sbjct: 735 VWSKEQLLAVCDSVTLEDVQGFAKEMLQA 763
>AF016421-3|AAM45374.1| 1051|Caenorhabditis elegans Hypothetical
protein F44E7.4b protein.
Length = 1051
Score = 27.9 bits (59), Expect = 1.8
Identities = 9/29 (31%), Positives = 20/29 (68%)
Frame = -1
Query: 198 LWATEPFVSDCDDLTVGEFVDFSRELLEA 112
+W+ E ++ CD +T+ + F++E+L+A
Sbjct: 719 VWSKEQLLAVCDSVTLEDVQGFAKEMLQA 747
>U55372-1|AAA98002.2| 816|Caenorhabditis elegans Hypothetical
protein C02G6.2 protein.
Length = 816
Score = 27.5 bits (58), Expect = 2.4
Identities = 10/29 (34%), Positives = 18/29 (62%)
Frame = -1
Query: 198 LWATEPFVSDCDDLTVGEFVDFSRELLEA 112
+W+ E ++ CD T+ + FS+EL +A
Sbjct: 676 VWSKEQLLAVCDSATLEDVQGFSKELFQA 704
>AC084158-36|AAK68577.1| 1219|Caenorhabditis elegans Hypothetical
protein Y69A2AR.31 protein.
Length = 1219
Score = 26.6 bits (56), Expect = 4.2
Identities = 14/41 (34%), Positives = 18/41 (43%)
Frame = +1
Query: 28 CRNRHEGSRHQGETLLRCARLRAGDGHRCLQQLPREVYELP 150
C + E H GE +RCA + C Q L R V +P
Sbjct: 502 CESVDECRWHLGELRVRCASTASCQREECAQSLQRFVTYVP 542
>Z81134-3|CAB03446.1| 991|Caenorhabditis elegans Hypothetical
protein T28D6.4 protein.
Length = 991
Score = 26.2 bits (55), Expect = 5.6
Identities = 10/22 (45%), Positives = 13/22 (59%)
Frame = +1
Query: 127 PREVYELPDGQVITIGNERFRC 192
P E++ +PD IG E FRC
Sbjct: 300 PSEIFHVPDIWFQLIGEENFRC 321
>Z68752-7|CAA92982.2| 693|Caenorhabditis elegans Hypothetical
protein T12G3.1 protein.
Length = 693
Score = 26.2 bits (55), Expect = 5.6
Identities = 13/42 (30%), Positives = 24/42 (57%)
Frame = +2
Query: 83 LDFEQEMATAASSSSLEKSTNSPTVKSSQSETKGSVAQRALF 208
L+ E + ASS+ L++ VK SQS+++ ++A L+
Sbjct: 454 LEQEAKKRAEASSAELQRKLAELNVKESQSKSEENIADFVLY 495
>U28742-2|AAA68332.2| 925|Caenorhabditis elegans Adaptin, alpha
chain (clathrinassociated complex) protein 2 protein.
Length = 925
Score = 25.8 bits (54), Expect = 7.4
Identities = 17/57 (29%), Positives = 28/57 (49%)
Frame = +2
Query: 35 IGTRVRDIKEKLCYVALDFEQEMATAASSSSLEKSTNSPTVKSSQSETKGSVAQRAL 205
+GT + + L Y+AL+ +AT+ S K + S ++E SV QRA+
Sbjct: 333 LGTFLSHRETNLRYLALESMCLLATSEFSHDAVKKHQDTIINSLKTERDVSVRQRAV 389
>AL023838-4|CAA19504.1| 218|Caenorhabditis elegans Hypothetical
protein Y43C5A.4 protein.
Length = 218
Score = 25.8 bits (54), Expect = 7.4
Identities = 12/33 (36%), Positives = 17/33 (51%)
Frame = +2
Query: 77 VALDFEQEMATAASSSSLEKSTNSPTVKSSQSE 175
V LD E + + EKS+ PT KS +S+
Sbjct: 72 VELDTTDEAKSTVNEDEKEKSSKRPTAKSKKSK 104
>U97016-4|AAN84886.1| 2692|Caenorhabditis elegans Lethal protein 363,
isoform b protein.
Length = 2692
Score = 25.4 bits (53), Expect = 9.7
Identities = 17/76 (22%), Positives = 30/76 (39%), Gaps = 2/76 (2%)
Frame = +2
Query: 14 WIPRAAGIGTRVRDIKEKLCYVALDFEQEMATAAS--SSSLEKSTNSPTVKSSQSETKGS 187
W+P + T V++ +EK + L E + S + L +S+ S T+G
Sbjct: 2410 WVPNCDTLHTLVKEYREKKAKIPLSIEHKTLQKLSLETEHLTLMQKLQLFESALSVTQGE 2469
Query: 188 VAQRALFXSPRFXWVW 235
+ L+ VW
Sbjct: 2470 DLRHVLWLKSPSSEVW 2485
>U97016-3|AAN84885.1| 2695|Caenorhabditis elegans Lethal protein 363,
isoform a protein.
Length = 2695
Score = 25.4 bits (53), Expect = 9.7
Identities = 17/76 (22%), Positives = 30/76 (39%), Gaps = 2/76 (2%)
Frame = +2
Query: 14 WIPRAAGIGTRVRDIKEKLCYVALDFEQEMATAAS--SSSLEKSTNSPTVKSSQSETKGS 187
W+P + T V++ +EK + L E + S + L +S+ S T+G
Sbjct: 2413 WVPNCDTLHTLVKEYREKKAKIPLSIEHKTLQKLSLETEHLTLMQKLQLFESALSVTQGE 2472
Query: 188 VAQRALFXSPRFXWVW 235
+ L+ VW
Sbjct: 2473 DLRHVLWLKSPSSEVW 2488
>U41110-1|AAA82415.1| 506|Caenorhabditis elegans Hypothetical
protein ZK682.2 protein.
Length = 506
Score = 25.4 bits (53), Expect = 9.7
Identities = 11/39 (28%), Positives = 19/39 (48%)
Frame = -1
Query: 291 STSHFMMELYVVSWLPHAFHTQXXRGLXKRALWATEPFV 175
S +H + + +++LP + T L LW+ PFV
Sbjct: 286 SFAHNYVTVGTITYLPLYYKTVLNMSLTSNGLWSALPFV 324
>U29244-14|AAC71095.1| 774|Caenorhabditis elegans Fzo (fzo
mitochondrial fusion protein)related protein 1 protein.
Length = 774
Score = 25.4 bits (53), Expect = 9.7
Identities = 12/50 (24%), Positives = 22/50 (44%)
Frame = +1
Query: 25 GCRNRHEGSRHQGETLLRCARLRAGDGHRCLQQLPREVYELPDGQVITIG 174
G + +H + + R ++ H C Q RE+ ++ DG T+G
Sbjct: 668 GAKEQHLKEQFRSHLAARMQQVSTAHTHHCETQAIREMDQVFDGLKATVG 717
>AL031621-3|CAA20935.2| 740|Caenorhabditis elegans Hypothetical
protein F28H6.6 protein.
Length = 740
Score = 25.4 bits (53), Expect = 9.7
Identities = 11/31 (35%), Positives = 20/31 (64%)
Frame = +2
Query: 89 FEQEMATAASSSSLEKSTNSPTVKSSQSETK 181
FE ++++SSS E N+PT + S +E++
Sbjct: 484 FESPEYSSSASSSAESRHNTPTEEQSSTESQ 514
>AF039713-13|AAB96719.2| 690|Caenorhabditis elegans Hypothetical
protein F57B10.1 protein.
Length = 690
Score = 25.4 bits (53), Expect = 9.7
Identities = 13/26 (50%), Positives = 16/26 (61%)
Frame = +2
Query: 104 ATAASSSSLEKSTNSPTVKSSQSETK 181
+T A+SSS STN VKSS E +
Sbjct: 224 STPATSSSSSSSTNGGFVKSSTGERR 249
Database: celegans
Posted date: Oct 23, 2007 1:18 PM
Number of letters in database: 12,740,198
Number of sequences in database: 27,780
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 6,767,421
Number of Sequences: 27780
Number of extensions: 108963
Number of successful extensions: 489
Number of sequences better than 10.0: 37
Number of HSP's better than 10.0 without gapping: 450
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 462
length of database: 12,740,198
effective HSP length: 71
effective length of database: 10,767,818
effective search space used: 398409266
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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