Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= S06A01NCLL0023_K12
(328 letters)
Database: rice
37,544 sequences; 14,793,348 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
03_01_0548 + 4099386-4099847,4100435-4101316 174 2e-44
03_01_0547 + 4093196-4093657,4094267-4095148 174 2e-44
03_01_0544 + 4082528-4082989,4083585-4084466 174 2e-44
03_01_0543 + 4076981-4077442,4078145-4079026 174 2e-44
04_04_1015 - 30115377-30115477,30115570-30115615,30116491-301165... 99 7e-22
04_04_1008 - 30054674-30054774,30054867-30054912,30055788-300558... 99 7e-22
04_03_0107 + 11328267-11328276,11329059-11329170,11329862-113299... 68 2e-12
04_04_1593 - 34661670-34661798,34661882-34661989,34662129-346623... 53 5e-08
02_04_0462 + 23131433-23132836 41 2e-04
03_06_0699 - 35612919-35612989,35613079-35613319,35613506-356135... 40 3e-04
03_05_0044 + 20203644-20204054,20204695-20204916,20205092-202051... 40 5e-04
06_01_0325 - 2366193-2366367,2367063-2367122,2367323-2367463,236... 37 0.003
04_04_0640 - 26891552-26891725,26891814-26892326,26892698-268936... 34 0.023
02_01_0432 - 3144560-3144655,3144792-3144832,3145019-3145094,314... 33 0.070
03_05_0511 + 25056018-25059107 32 0.12
01_06_0734 + 31569017-31569358,31569832-31569906,31570009-315701... 31 0.16
02_04_0148 - 20198407-20201424 31 0.21
06_03_0345 + 19758188-19758382,19759857-19759952,19760061-197601... 30 0.49
04_01_0103 + 1082077-1082167,1083037-1085477 29 0.65
02_04_0017 + 18937774-18937864,18938505-18940945 29 0.65
01_06_0548 - 30137139-30139196,30139279-30139691,30139822-30139912 29 0.86
01_06_0662 + 30987187-30987277,30987825-30990214 29 1.1
07_01_0220 - 1631395-1631496,1632063-1634036 26 1.9
06_01_0501 - 3587390-3587528,3587922-3588031,3588122-3588187,358... 28 2.0
04_03_0106 + 11325172-11325379,11326590-11326640,11326987-113270... 27 3.5
02_05_1118 + 34241819-34242217,34242350-34242522,34243499-342436... 27 3.5
05_02_0078 - 6386278-6386291,6386462-6386594,6386721-6388613,639... 26 6.1
12_01_0491 - 3884764-3885114,3885143-3885403,3885493-3885711,388... 26 8.0
05_04_0338 - 20392482-20392832,20393236-20393305,20393571-203937... 26 8.0
03_02_0133 + 5816393-5817877 26 8.0
03_05_1153 + 30787574-30787608,30787982-30788089,30788651-307886... 23 9.4
>03_01_0548 + 4099386-4099847,4100435-4101316
Length = 447
Score = 174 bits (423), Expect = 2e-44
Identities = 81/92 (88%), Positives = 84/92 (91%)
Frame = +3
Query: 51 MGKEKVHINIVVIGHVDSGKSTTTGHLIYKCGGIDERTIEKFEKEAQEMGKGSFKYAWVL 230
MGKEK HINIVVIGHVDSGKSTTTGHLIYK GGID+R IE+FEKEA EM K SFKYAWVL
Sbjct: 1 MGKEKTHINIVVIGHVDSGKSTTTGHLIYKLGGIDKRVIERFEKEAAEMNKRSFKYAWVL 60
Query: 231 DKLKAERERGITIDIALWKFETGKYYVTIIDA 326
DKLKAERERGITIDIALWKFET KYY T+IDA
Sbjct: 61 DKLKAERERGITIDIALWKFETTKYYCTVIDA 92
>03_01_0547 + 4093196-4093657,4094267-4095148
Length = 447
Score = 174 bits (423), Expect = 2e-44
Identities = 81/92 (88%), Positives = 84/92 (91%)
Frame = +3
Query: 51 MGKEKVHINIVVIGHVDSGKSTTTGHLIYKCGGIDERTIEKFEKEAQEMGKGSFKYAWVL 230
MGKEK HINIVVIGHVDSGKSTTTGHLIYK GGID+R IE+FEKEA EM K SFKYAWVL
Sbjct: 1 MGKEKTHINIVVIGHVDSGKSTTTGHLIYKLGGIDKRVIERFEKEAAEMNKRSFKYAWVL 60
Query: 231 DKLKAERERGITIDIALWKFETGKYYVTIIDA 326
DKLKAERERGITIDIALWKFET KYY T+IDA
Sbjct: 61 DKLKAERERGITIDIALWKFETTKYYCTVIDA 92
>03_01_0544 + 4082528-4082989,4083585-4084466
Length = 447
Score = 174 bits (423), Expect = 2e-44
Identities = 81/92 (88%), Positives = 84/92 (91%)
Frame = +3
Query: 51 MGKEKVHINIVVIGHVDSGKSTTTGHLIYKCGGIDERTIEKFEKEAQEMGKGSFKYAWVL 230
MGKEK HINIVVIGHVDSGKSTTTGHLIYK GGID+R IE+FEKEA EM K SFKYAWVL
Sbjct: 1 MGKEKTHINIVVIGHVDSGKSTTTGHLIYKLGGIDKRVIERFEKEAAEMNKRSFKYAWVL 60
Query: 231 DKLKAERERGITIDIALWKFETGKYYVTIIDA 326
DKLKAERERGITIDIALWKFET KYY T+IDA
Sbjct: 61 DKLKAERERGITIDIALWKFETTKYYCTVIDA 92
>03_01_0543 + 4076981-4077442,4078145-4079026
Length = 447
Score = 174 bits (423), Expect = 2e-44
Identities = 81/92 (88%), Positives = 84/92 (91%)
Frame = +3
Query: 51 MGKEKVHINIVVIGHVDSGKSTTTGHLIYKCGGIDERTIEKFEKEAQEMGKGSFKYAWVL 230
MGKEK HINIVVIGHVDSGKSTTTGHLIYK GGID+R IE+FEKEA EM K SFKYAWVL
Sbjct: 1 MGKEKTHINIVVIGHVDSGKSTTTGHLIYKLGGIDKRVIERFEKEAAEMNKRSFKYAWVL 60
Query: 231 DKLKAERERGITIDIALWKFETGKYYVTIIDA 326
DKLKAERERGITIDIALWKFET KYY T+IDA
Sbjct: 61 DKLKAERERGITIDIALWKFETTKYYCTVIDA 92
>04_04_1015 -
30115377-30115477,30115570-30115615,30116491-30116590,
30116676-30116771,30119519-30119556,30119623-30119733,
30119820-30119951,30120024-30120263,30120532-30120700,
30120994-30121493,30121581-30121691,30121802-30122133,
30122603-30122737,30122839-30122988,30123809-30123947
Length = 799
Score = 99.1 bits (236), Expect = 7e-22
Identities = 42/85 (49%), Positives = 62/85 (72%)
Frame = +3
Query: 72 INIVVIGHVDSGKSTTTGHLIYKCGGIDERTIEKFEKEAQEMGKGSFKYAWVLDKLKAER 251
+N+ ++GHVDSGKST +G L++ G I ++ + K EKEA+E GKGSF YAW +D+ ER
Sbjct: 248 LNLAIVGHVDSGKSTLSGRLLHLLGRISKKDMHKNEKEAKEKGKGSFAYAWAMDESSEER 307
Query: 252 ERGITIDIALWKFETGKYYVTIIDA 326
ERG+T+ +A+ ET KY V ++D+
Sbjct: 308 ERGVTMTVAVAYLETKKYRVVLLDS 332
>04_04_1008 -
30054674-30054774,30054867-30054912,30055788-30055887,
30055973-30056068,30058816-30058853,30058920-30059030,
30059117-30059248,30059321-30059560,30059829-30059997,
30060291-30060790,30060878-30060988,30061099-30061430,
30061900-30062034,30062136-30062285,30063106-30063244
Length = 799
Score = 99.1 bits (236), Expect = 7e-22
Identities = 42/85 (49%), Positives = 62/85 (72%)
Frame = +3
Query: 72 INIVVIGHVDSGKSTTTGHLIYKCGGIDERTIEKFEKEAQEMGKGSFKYAWVLDKLKAER 251
+N+ ++GHVDSGKST +G L++ G I ++ + K EKEA+E GKGSF YAW +D+ ER
Sbjct: 248 LNLAIVGHVDSGKSTLSGRLLHLLGRISKKDMHKNEKEAKEKGKGSFAYAWAMDESSEER 307
Query: 252 ERGITIDIALWKFETGKYYVTIIDA 326
ERG+T+ +A+ ET KY V ++D+
Sbjct: 308 ERGVTMTVAVAYLETKKYRVVLLDS 332
>04_03_0107 +
11328267-11328276,11329059-11329170,11329862-11329907,
11330185-11330256,11332292-11332303,11332880-11332942,
11333038-11333192,11333303-11333367,11334645-11334795,
11335230-11335335,11335440-11335575,11336310-11336374,
11337003-11337188,11337298-11337399
Length = 426
Score = 67.7 bits (158), Expect = 2e-12
Identities = 30/76 (39%), Positives = 51/76 (67%)
Frame = +3
Query: 99 DSGKSTTTGHLIYKCGGIDERTIEKFEKEAQEMGKGSFKYAWVLDKLKAERERGITIDIA 278
D+GKST G +++ G +D+RTI+K+EKEA++ + S+ A+++D + ER +G T+++
Sbjct: 4 DAGKSTAGGQILFLSGQVDDRTIQKYEKEAKDKSRESWYMAYIMDTNEEERLKGKTVEVG 63
Query: 279 LWKFETGKYYVTIIDA 326
FET TI+DA
Sbjct: 64 RAHFETETTRFTILDA 79
>04_04_1593 -
34661670-34661798,34661882-34661989,34662129-34662368,
34662614-34662782,34662872-34663362,34663681-34663991,
34664396-34664473,34665034-34665228,34665363-34665524,
34665759-34665840
Length = 654
Score = 53.2 bits (122), Expect = 5e-08
Identities = 21/44 (47%), Positives = 32/44 (72%)
Frame = +3
Query: 195 MGKGSFKYAWVLDKLKAERERGITIDIALWKFETGKYYVTIIDA 326
+GKGSF YAW +D+ ERERGIT+ + + F+T Y+V ++D+
Sbjct: 276 IGKGSFAYAWAMDESADERERGITMTVGVAYFDTKNYHVVLLDS 319
>02_04_0462 + 23131433-23132836
Length = 467
Score = 41.1 bits (92), Expect = 2e-04
Identities = 28/92 (30%), Positives = 42/92 (45%)
Frame = +3
Query: 48 KMGKEKVHINIVVIGHVDSGKSTTTGHLIYKCGGIDERTIEKFEKEAQEMGKGSFKYAWV 227
K + K H+NI IGHVD GK+T T L + +K+++
Sbjct: 63 KFERTKPHVNIGTIGHVDHGKTTLTAALTMVLASVGGSAPKKYDE--------------- 107
Query: 228 LDKLKAERERGITIDIALWKFETGKYYVTIID 323
+D ER RGITI+ A ++ET + +D
Sbjct: 108 IDAAPEERARGITINTATVEYETETRHYAHVD 139
>03_06_0699 -
35612919-35612989,35613079-35613319,35613506-35613568,
35613644-35613709,35614110-35614193,35614685-35614890,
35614977-35615067,35615176-35615280,35615552-35615626,
35615728-35615820,35615914-35615989,35616115-35616305
Length = 453
Score = 40.3 bits (90), Expect = 3e-04
Identities = 29/89 (32%), Positives = 40/89 (44%)
Frame = +3
Query: 57 KEKVHINIVVIGHVDSGKSTTTGHLIYKCGGIDERTIEKFEKEAQEMGKGSFKYAWVLDK 236
+ K H+N+ IGHVD GK+T T + K E GK +DK
Sbjct: 63 RTKPHVNVGTIGHVDHGKTTLTAAI---------------TKVLAEAGKAKAVAFDEIDK 107
Query: 237 LKAERERGITIDIALWKFETGKYYVTIID 323
E+ RGITI A ++ET K + +D
Sbjct: 108 APEEKARGITIATAHVEYETAKRHYAHVD 136
>03_05_0044 +
20203644-20204054,20204695-20204916,20205092-20205130,
20206275-20206396,20206489-20206639,20207892-20207963,
20208256-20208351,20208861-20208949,20209068-20209134,
20210197-20210235,20210369-20210429,20210572-20210681,
20210766-20210840,20210914-20210982,20213126-20213247,
20214682-20214807,20214897-20215017,20215133-20215233,
20215564-20215624,20216560-20216613,20217585-20217689
Length = 770
Score = 39.9 bits (89), Expect = 5e-04
Identities = 29/83 (34%), Positives = 39/83 (46%)
Frame = +3
Query: 75 NIVVIGHVDSGKSTTTGHLIYKCGGIDERTIEKFEKEAQEMGKGSFKYAWVLDKLKAERE 254
NI + H+DSGK+T T ++Y G I E + G G+ +D + ERE
Sbjct: 70 NIGISAHIDSGKTTLTERVLYYTGRIHE-----IHEVRGRDGVGA-----KMDSMDLERE 119
Query: 255 RGITIDIALWKFETGKYYVTIID 323
+GITI A Y V IID
Sbjct: 120 KGITIQSAATYCTWNGYQVNIID 142
>06_01_0325 -
2366193-2366367,2367063-2367122,2367323-2367463,
2368175-2368288,2368444-2368475,2368736-2368793,
2369263-2369434,2369584-2370334,2370743-2371036
Length = 598
Score = 37.1 bits (82), Expect = 0.003
Identities = 28/65 (43%), Positives = 34/65 (52%)
Frame = +3
Query: 75 NIVVIGHVDSGKSTTTGHLIYKCGGIDERTIEKFEKEAQEMGKGSFKYAWVLDKLKAERE 254
N +I HVD GKST L+ G TI+K G G +Y LDKL+ ERE
Sbjct: 59 NFSIIAHVDHGKSTLADRLLELTG-----TIKK--------GHGQPQY---LDKLQVERE 102
Query: 255 RGITI 269
RGIT+
Sbjct: 103 RGITV 107
>04_04_0640 -
26891552-26891725,26891814-26892326,26892698-26893644,
26893778-26894114,26894413-26894462,26895020-26895248
Length = 749
Score = 34.3 bits (75), Expect = 0.023
Identities = 26/85 (30%), Positives = 42/85 (49%)
Frame = +3
Query: 69 HINIVVIGHVDSGKSTTTGHLIYKCGGIDERTIEKFEKEAQEMGKGSFKYAWVLDKLKAE 248
HI+ V++ H+D+GK+TTT ++Y G + E +G+ W ++ E
Sbjct: 105 HIS-VIMAHIDAGKTTTTERVLYYTGR---------NYKIGEFQEGTVTMDW----MEQE 150
Query: 249 RERGITIDIALWKFETGKYYVTIID 323
+ERGITI K+ + IID
Sbjct: 151 QERGITITSPPTTAFWNKHRINIID 175
>02_01_0432 -
3144560-3144655,3144792-3144832,3145019-3145094,
3145465-3145542,3146121-3146208,3146613-3146686,
3147445-3147579,3147699-3147770,3148239-3148325,
3148418-3148522,3149028-3149085,3149576-3149634,
3149960-3150056,3150217-3150317,3150443-3150487,
3150619-3150681,3151082-3151147,3151286-3151342,
3151570-3151656,3152063-3152239,3152413-3152625
Length = 624
Score = 32.7 bits (71), Expect = 0.070
Identities = 24/67 (35%), Positives = 32/67 (47%)
Frame = +3
Query: 75 NIVVIGHVDSGKSTTTGHLIYKCGGIDERTIEKFEKEAQEMGKGSFKYAWVLDKLKAERE 254
N +I H+D GKST L+ G T++K E + Q LD + ERE
Sbjct: 79 NFSIIAHIDHGKSTLADKLLELTG-----TVQKREMKQQ-----------FLDNMDLERE 122
Query: 255 RGITIDI 275
RGITI +
Sbjct: 123 RGITIKL 129
>03_05_0511 + 25056018-25059107
Length = 1029
Score = 31.9 bits (69), Expect = 0.12
Identities = 11/24 (45%), Positives = 15/24 (62%)
Frame = +3
Query: 75 NIVVIGHVDSGKSTTTGHLIYKCG 146
N ++ HVD GK+T HL+ CG
Sbjct: 12 NTCILAHVDHGKTTLADHLVASCG 35
>01_06_0734 +
31569017-31569358,31569832-31569906,31570009-31570159,
31570716-31570784,31570864-31571036,31571474-31571611,
31571747-31571872,31571951-31572049,31573175-31573298,
31573465-31573528,31573798-31573852,31573951-31574075,
31574228-31574301,31574436-31574485,31574722-31574808,
31574897-31574947,31575025-31575108,31575400-31575498
Length = 661
Score = 31.5 bits (68), Expect = 0.16
Identities = 12/24 (50%), Positives = 16/24 (66%)
Frame = +3
Query: 75 NIVVIGHVDSGKSTTTGHLIYKCG 146
N+ VI HVD GK+T L+ +CG
Sbjct: 66 NVAVIAHVDHGKTTLMDRLLRQCG 89
>02_04_0148 - 20198407-20201424
Length = 1005
Score = 31.1 bits (67), Expect = 0.21
Identities = 23/68 (33%), Positives = 32/68 (47%)
Frame = +3
Query: 75 NIVVIGHVDSGKSTTTGHLIYKCGGIDERTIEKFEKEAQEMGKGSFKYAWVLDKLKAERE 254
N ++ HVD GK++ HLI G E+ E GS A V+D L+ E+
Sbjct: 18 NTCILAHVDHGKTSLADHLIAAYGS---------ERRVSERMAGS---ARVMDHLEEEQR 65
Query: 255 RGITIDIA 278
R IT+ A
Sbjct: 66 RAITMKSA 73
>06_03_0345 +
19758188-19758382,19759857-19759952,19760061-19760144,
19760504-19760573,19760934-19761838,19763661-19764287
Length = 658
Score = 29.9 bits (64), Expect = 0.49
Identities = 12/27 (44%), Positives = 17/27 (62%)
Frame = -2
Query: 255 AHARPLVCPIPKRI*RNPYPFPGLPSR 175
A ARP + P+P+R + +PFP P R
Sbjct: 351 ARARPSIPPLPRRACPSSWPFPTSPKR 377
>04_01_0103 + 1082077-1082167,1083037-1085477
Length = 843
Score = 29.5 bits (63), Expect = 0.65
Identities = 15/32 (46%), Positives = 18/32 (56%)
Frame = +3
Query: 51 MGKEKVHINIVVIGHVDSGKSTTTGHLIYKCG 146
M K+ N+ VI HVD GKST T L+ G
Sbjct: 13 MDKKNNIRNMSVIAHVDHGKSTLTDSLVAAAG 44
>02_04_0017 + 18937774-18937864,18938505-18940945
Length = 843
Score = 29.5 bits (63), Expect = 0.65
Identities = 15/32 (46%), Positives = 18/32 (56%)
Frame = +3
Query: 51 MGKEKVHINIVVIGHVDSGKSTTTGHLIYKCG 146
M K+ N+ VI HVD GKST T L+ G
Sbjct: 13 MDKKNNIRNMSVIAHVDHGKSTLTDSLVAAAG 44
>01_06_0548 - 30137139-30139196,30139279-30139691,30139822-30139912
Length = 853
Score = 29.1 bits (62), Expect = 0.86
Identities = 13/24 (54%), Positives = 15/24 (62%)
Frame = +3
Query: 75 NIVVIGHVDSGKSTTTGHLIYKCG 146
N+ VI HVD GKST T L+ G
Sbjct: 21 NMSVIAHVDHGKSTLTDSLVAAAG 44
>01_06_0662 + 30987187-30987277,30987825-30990214
Length = 826
Score = 28.7 bits (61), Expect = 1.1
Identities = 12/24 (50%), Positives = 15/24 (62%)
Frame = +3
Query: 75 NIVVIGHVDSGKSTTTGHLIYKCG 146
N+ V+ HVD GKST T L+ G
Sbjct: 21 NMSVVAHVDHGKSTLTDSLVAAAG 44
>07_01_0220 - 1631395-1631496,1632063-1634036
Length = 691
Score = 25.8 bits (54), Expect(2) = 1.9
Identities = 11/28 (39%), Positives = 14/28 (50%)
Frame = -3
Query: 326 SVDDGDIVFAGFELPESNIDGDTTLTLG 243
S D VF+GF +DG T+T G
Sbjct: 24 SASDDQFVFSGFSGANVTLDGTATVTAG 51
Score = 20.6 bits (41), Expect(2) = 1.9
Identities = 10/18 (55%), Positives = 12/18 (66%)
Frame = -3
Query: 212 EGTLTHFLGFLLELFDGT 159
+GT T G LLEL +GT
Sbjct: 43 DGTATVTAGGLLELTNGT 60
>06_01_0501 -
3587390-3587528,3587922-3588031,3588122-3588187,
3588293-3588410,3588499-3588554,3588647-3588766,
3588937-3589035,3589443-3589490,3589534-3589545,
3590353-3590418,3591412-3591471,3592061-3592162,
3592405-3592426,3592959-3593041,3593166-3593293,
3593775-3593881,3594376-3594845
Length = 601
Score = 27.9 bits (59), Expect = 2.0
Identities = 13/30 (43%), Positives = 18/30 (60%)
Frame = -2
Query: 243 PLVCPIPKRI*RNPYPFPGLPSRTFRWYVR 154
PL+ P P R+ PF +P+R+F WY R
Sbjct: 46 PLL-PSPPRLPPLLVPFAAVPARSFSWYPR 74
>04_03_0106 +
11325172-11325379,11326590-11326640,11326987-11327073,
11327276-11327373
Length = 147
Score = 27.1 bits (57), Expect = 3.5
Identities = 10/15 (66%), Positives = 12/15 (80%)
Frame = +3
Query: 63 KVHINIVVIGHVDSG 107
K H+N+V IGHVD G
Sbjct: 104 KRHLNVVFIGHVDPG 118
>02_05_1118 +
34241819-34242217,34242350-34242522,34243499-34243660,
34243762-34243903,34244320-34244544,34244649-34244711,
34244817-34244891,34245198-34245404,34247274-34247465,
34247515-34247634
Length = 585
Score = 27.1 bits (57), Expect = 3.5
Identities = 15/62 (24%), Positives = 31/62 (50%)
Frame = +3
Query: 96 VDSGKSTTTGHLIYKCGGIDERTIEKFEKEAQEMGKGSFKYAWVLDKLKAERERGITIDI 275
V S S T L+ + G D +++ ++A ++ + + V D + RE+G T+D+
Sbjct: 428 VFSKSSRETAKLVARWFGPDSDELKRMSEKALKLAQPEAVFDIVRDIHELSREQGPTVDV 487
Query: 276 AL 281
+
Sbjct: 488 TI 489
>05_02_0078 -
6386278-6386291,6386462-6386594,6386721-6388613,
6391153-6391239,6391691-6391765,6393982-6394327,
6394428-6394450
Length = 856
Score = 26.2 bits (55), Expect = 6.1
Identities = 9/17 (52%), Positives = 11/17 (64%)
Frame = -2
Query: 195 FPGLPSRTFRWYVRRYH 145
FP +P R FRW+V H
Sbjct: 31 FPPMPIRRFRWWVDELH 47
>12_01_0491 -
3884764-3885114,3885143-3885403,3885493-3885711,
3885792-3886019,3886378-3886480,3886703-3886815,
3887262-3887323,3887915-3888104
Length = 508
Score = 25.8 bits (54), Expect = 8.0
Identities = 12/24 (50%), Positives = 15/24 (62%)
Frame = +3
Query: 45 PKMGKEKVHINIVVIGHVDSGKST 116
P++ + INI IGHV GKST
Sbjct: 52 PEVISRQATINIGTIGHVAHGKST 75
>05_04_0338 -
20392482-20392832,20393236-20393305,20393571-20393790,
20394249-20394342,20394754-20394865,20395081-20395487
Length = 417
Score = 25.8 bits (54), Expect = 8.0
Identities = 11/24 (45%), Positives = 13/24 (54%)
Frame = +2
Query: 254 AWYHHRYCSLEVRNRQILCHHHRR 325
A +HHR S R + HHHRR
Sbjct: 13 AAHHHRLSSSSPAARTRVVHHHRR 36
>03_02_0133 + 5816393-5817877
Length = 494
Score = 25.8 bits (54), Expect = 8.0
Identities = 10/27 (37%), Positives = 17/27 (62%)
Frame = +3
Query: 105 GKSTTTGHLIYKCGGIDERTIEKFEKE 185
G+ TTG ++ +++R IE +EKE
Sbjct: 210 GERATTGWVVNSFADLEQRYIEHYEKE 236
>03_05_1153 +
30787574-30787608,30787982-30788089,30788651-30788689,
30789181-30789184,30789496-30789580,30789609-30790321
Length = 327
Score = 22.6 bits (46), Expect(2) = 9.4
Identities = 7/15 (46%), Positives = 10/15 (66%)
Frame = -2
Query: 234 CPIPKRI*RNPYPFP 190
CP P ++ PYP+P
Sbjct: 240 CPPPPKVVEVPYPWP 254
Score = 21.4 bits (43), Expect(2) = 9.4
Identities = 7/9 (77%), Positives = 7/9 (77%)
Frame = -2
Query: 204 PYPFPGLPS 178
PYPFP PS
Sbjct: 256 PYPFPSWPS 264
Database: rice
Posted date: Oct 4, 2007 10:57 AM
Number of letters in database: 14,793,348
Number of sequences in database: 37,544
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 9,161,542
Number of Sequences: 37544
Number of extensions: 182805
Number of successful extensions: 545
Number of sequences better than 10.0: 32
Number of HSP's better than 10.0 without gapping: 530
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 542
length of database: 14,793,348
effective HSP length: 72
effective length of database: 12,090,180
effective search space used: 435246480
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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