Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= S06A01NCLL0023_K12
(328 letters)
Database: bee
438 sequences; 146,343 total letters
Searching......................................................done
Score E
Sequences producing significant alignments: (bits) Value
X52884-1|CAA37066.1| 461|Apis mellifera elongation factor 1 alp... 194 3e-52
AF015267-1|AAC38959.1| 461|Apis mellifera elongation factor-1al... 194 3e-52
AY208278-1|AAO48970.1| 274|Apis mellifera elongation factor 1-a... 76 1e-16
EF013389-1|ABK54743.1| 172|Apis mellifera elongation factor 1-a... 43 1e-06
AF069739-1|AAC63272.2| 690|Apis mellifera translation initiatio... 25 0.31
AM050259-1|CAJ18340.1| 683|Apis mellifera putative H3K9 methylt... 24 0.41
AB183889-1|BAD86829.1| 316|Apis mellifera Mos protein. 23 0.71
DQ325087-1|ABD14101.1| 179|Apis mellifera complementary sex det... 21 3.8
DQ325086-1|ABD14100.1| 179|Apis mellifera complementary sex det... 21 3.8
DQ325085-1|ABD14099.1| 179|Apis mellifera complementary sex det... 21 3.8
DQ325084-1|ABD14098.1| 179|Apis mellifera complementary sex det... 21 3.8
DQ067178-1|AAZ20250.1| 448|Apis mellifera conserved ATPase doma... 21 3.8
AY686596-1|AAT96374.1| 1946|Apis mellifera Dscam protein. 21 5.0
AB238796-1|BAE93398.1| 128|Apis mellifera Queen brain-selective... 21 5.0
AB013288-1|BAA87894.1| 149|Apis mellifera protein kinase C prot... 20 6.6
L10430-1|AAA27731.1| 150|Apis mellifera transposase protein. 20 8.8
AY331183-1|AAP94623.1| 953|Apis mellifera NMDA-type glutamate r... 20 8.8
>X52884-1|CAA37066.1| 461|Apis mellifera elongation factor 1 alpha
protein.
Length = 461
Score = 194 bits (472), Expect = 3e-52
Identities = 89/92 (96%), Positives = 91/92 (98%)
Frame = +3
Query: 51 MGKEKVHINIVVIGHVDSGKSTTTGHLIYKCGGIDERTIEKFEKEAQEMGKGSFKYAWVL 230
MGKEK+HINIVVIGHVDSGKSTTTGHLIYKCGGID+RTIEKFEKEAQEMGKGSFKYAWVL
Sbjct: 1 MGKEKIHINIVVIGHVDSGKSTTTGHLIYKCGGIDKRTIEKFEKEAQEMGKGSFKYAWVL 60
Query: 231 DKLKAERERGITIDIALWKFETGKYYVTIIDA 326
DKLKAERERGITIDIALWKFET KYYVTIIDA
Sbjct: 61 DKLKAERERGITIDIALWKFETAKYYVTIIDA 92
>AF015267-1|AAC38959.1| 461|Apis mellifera elongation factor-1alpha
F2 protein.
Length = 461
Score = 194 bits (472), Expect = 3e-52
Identities = 89/92 (96%), Positives = 91/92 (98%)
Frame = +3
Query: 51 MGKEKVHINIVVIGHVDSGKSTTTGHLIYKCGGIDERTIEKFEKEAQEMGKGSFKYAWVL 230
MGKEK+HINIVVIGHVDSGKSTTTGHLIYKCGGID+RTIEKFEKEAQEMGKGSFKYAWVL
Sbjct: 1 MGKEKIHINIVVIGHVDSGKSTTTGHLIYKCGGIDKRTIEKFEKEAQEMGKGSFKYAWVL 60
Query: 231 DKLKAERERGITIDIALWKFETGKYYVTIIDA 326
DKLKAERERGITIDIALWKFET KYYVTIIDA
Sbjct: 61 DKLKAERERGITIDIALWKFETSKYYVTIIDA 92
>AY208278-1|AAO48970.1| 274|Apis mellifera elongation factor
1-alpha protein.
Length = 274
Score = 75.8 bits (178), Expect = 1e-16
Identities = 34/35 (97%), Positives = 34/35 (97%)
Frame = +3
Query: 222 WVLDKLKAERERGITIDIALWKFETGKYYVTIIDA 326
WVLDKLKAERERGITIDIALWKFET KYYVTIIDA
Sbjct: 1 WVLDKLKAERERGITIDIALWKFETSKYYVTIIDA 35
>EF013389-1|ABK54743.1| 172|Apis mellifera elongation factor
1-alpha protein.
Length = 172
Score = 42.7 bits (96), Expect = 1e-06
Identities = 18/19 (94%), Positives = 18/19 (94%)
Frame = +3
Query: 270 DIALWKFETGKYYVTIIDA 326
DIALWKFET KYYVTIIDA
Sbjct: 1 DIALWKFETSKYYVTIIDA 19
>AF069739-1|AAC63272.2| 690|Apis mellifera translation initiation
factor 2 protein.
Length = 690
Score = 24.6 bits (51), Expect = 0.31
Identities = 9/18 (50%), Positives = 13/18 (72%)
Frame = +3
Query: 63 KVHINIVVIGHVDSGKST 116
K H + ++GHVD GK+T
Sbjct: 143 KRHPIVTIMGHVDHGKTT 160
>AM050259-1|CAJ18340.1| 683|Apis mellifera putative H3K9
methyltransferase protein.
Length = 683
Score = 24.2 bits (50), Expect = 0.41
Identities = 11/15 (73%), Positives = 11/15 (73%)
Frame = +3
Query: 72 INIVVIGHVDSGKST 116
INI IGHV GKST
Sbjct: 43 INIGTIGHVAHGKST 57
>AB183889-1|BAD86829.1| 316|Apis mellifera Mos protein.
Length = 316
Score = 23.4 bits (48), Expect = 0.71
Identities = 12/24 (50%), Positives = 15/24 (62%), Gaps = 3/24 (12%)
Frame = +2
Query: 2 HEARILHADCNP---*LTKNGQRK 64
H A I+HAD P ++KNGQ K
Sbjct: 172 HNAGIVHADVKPKNILMSKNGQPK 195
>DQ325087-1|ABD14101.1| 179|Apis mellifera complementary sex
determiner protein.
Length = 179
Score = 21.0 bits (42), Expect = 3.8
Identities = 7/22 (31%), Positives = 14/22 (63%)
Frame = -2
Query: 180 SRTFRWYVRRYHRICRSSDQLL 115
+R +R R+Y ++C ++LL
Sbjct: 9 NREYRKKDRQYEKLCNEEEKLL 30
>DQ325086-1|ABD14100.1| 179|Apis mellifera complementary sex
determiner protein.
Length = 179
Score = 21.0 bits (42), Expect = 3.8
Identities = 7/22 (31%), Positives = 14/22 (63%)
Frame = -2
Query: 180 SRTFRWYVRRYHRICRSSDQLL 115
+R +R R+Y ++C ++LL
Sbjct: 9 NREYRKKDRQYEKLCNEEEKLL 30
>DQ325085-1|ABD14099.1| 179|Apis mellifera complementary sex
determiner protein.
Length = 179
Score = 21.0 bits (42), Expect = 3.8
Identities = 7/22 (31%), Positives = 14/22 (63%)
Frame = -2
Query: 180 SRTFRWYVRRYHRICRSSDQLL 115
+R +R R+Y ++C ++LL
Sbjct: 9 NREYRKKDRQYEKLCNEEEKLL 30
>DQ325084-1|ABD14098.1| 179|Apis mellifera complementary sex
determiner protein.
Length = 179
Score = 21.0 bits (42), Expect = 3.8
Identities = 7/22 (31%), Positives = 14/22 (63%)
Frame = -2
Query: 180 SRTFRWYVRRYHRICRSSDQLL 115
+R +R R+Y ++C ++LL
Sbjct: 9 NREYRKKDRQYEKLCNEEEKLL 30
>DQ067178-1|AAZ20250.1| 448|Apis mellifera conserved ATPase domain
protein protein.
Length = 448
Score = 21.0 bits (42), Expect = 3.8
Identities = 5/11 (45%), Positives = 9/11 (81%)
Frame = -2
Query: 168 RWYVRRYHRIC 136
RW + ++HR+C
Sbjct: 186 RWDLGKFHRVC 196
>AY686596-1|AAT96374.1| 1946|Apis mellifera Dscam protein.
Length = 1946
Score = 20.6 bits (41), Expect = 5.0
Identities = 12/34 (35%), Positives = 18/34 (52%)
Frame = +1
Query: 136 TNAVVSTNVPSKSSRRKPRKWVRVPSNTLGYWTN 237
TNA + S+S R+ ++ RVPS G T+
Sbjct: 1767 TNASAHSRSGSQSMPRQNGRYSRVPSQGGGSGTH 1800
>AB238796-1|BAE93398.1| 128|Apis mellifera Queen brain-selective
protein-1 protein.
Length = 128
Score = 20.6 bits (41), Expect = 5.0
Identities = 7/14 (50%), Positives = 11/14 (78%)
Frame = -3
Query: 227 YPSVFEGTLTHFLG 186
YPS+ +GT ++ LG
Sbjct: 25 YPSIRQGTTSYCLG 38
>AB013288-1|BAA87894.1| 149|Apis mellifera protein kinase C
protein.
Length = 149
Score = 20.2 bits (40), Expect = 6.6
Identities = 9/21 (42%), Positives = 11/21 (52%)
Frame = -3
Query: 317 DGDIVFAGFELPESNIDGDTT 255
DG I A F + + I GD T
Sbjct: 121 DGHIKIADFGMCKEGISGDKT 141
>L10430-1|AAA27731.1| 150|Apis mellifera transposase protein.
Length = 150
Score = 19.8 bits (39), Expect = 8.8
Identities = 10/33 (30%), Positives = 17/33 (51%)
Frame = +1
Query: 115 QQLVT*STNAVVSTNVPSKSSRRKPRKWVRVPS 213
++L+T VV N+ K S +PR+ + S
Sbjct: 26 KRLITGDEKWVVYNNIKRKRSWSRPRESAQTTS 58
>AY331183-1|AAP94623.1| 953|Apis mellifera NMDA-type glutamate
receptor 1 protein.
Length = 953
Score = 19.8 bits (39), Expect = 8.8
Identities = 7/20 (35%), Positives = 13/20 (65%)
Frame = -3
Query: 320 DDGDIVFAGFELPESNIDGD 261
D+GD +FA +++ +GD
Sbjct: 351 DNGDRIFAEYDIINIQENGD 370
Database: bee
Posted date: Oct 23, 2007 1:17 PM
Number of letters in database: 146,343
Number of sequences in database: 438
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 95,054
Number of Sequences: 438
Number of extensions: 1999
Number of successful extensions: 17
Number of sequences better than 10.0: 17
Number of HSP's better than 10.0 without gapping: 17
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 17
length of database: 146,343
effective HSP length: 50
effective length of database: 124,443
effective search space used: 7217694
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 39 (20.8 bits)
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