Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= S06A01NCLL0023_K11
(377 letters)
Database: celegans
27,780 sequences; 12,740,198 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
AF003148-10|AAB54206.2| 427|Caenorhabditis elegans Hypothetical... 110 4e-25
AF043703-6|AAK21503.1| 399|Caenorhabditis elegans Hypothetical ... 109 6e-25
U41543-2|AAO21426.1| 359|Caenorhabditis elegans Hypothetical pr... 105 1e-23
U41543-1|AAB37022.2| 396|Caenorhabditis elegans Hypothetical pr... 105 1e-23
Z75714-4|CAB00062.1| 360|Caenorhabditis elegans Hypothetical pr... 98 2e-21
Z83109-2|CAB05517.1| 372|Caenorhabditis elegans Hypothetical pr... 89 7e-19
AF106575-6|AAC78175.2| 244|Caenorhabditis elegans Hypothetical ... 67 4e-12
Z78536-2|CAB01716.1| 363|Caenorhabditis elegans Hypothetical pr... 31 0.36
Z49968-1|CAA90258.2| 499|Caenorhabditis elegans Hypothetical pr... 28 2.5
AC024770-5|AAK84605.2| 684|Caenorhabditis elegans Hypothetical ... 28 2.5
Z83217-5|CAB05684.2| 1565|Caenorhabditis elegans Hypothetical pr... 27 5.9
Z68135-1|CAA92227.1| 325|Caenorhabditis elegans Hypothetical pr... 27 5.9
AM086627-1|CAJ31105.1| 1565|Caenorhabditis elegans KIN-4 protein... 27 5.9
>AF003148-10|AAB54206.2| 427|Caenorhabditis elegans Hypothetical
protein F32B5.1 protein.
Length = 427
Score = 110 bits (264), Expect = 4e-25
Identities = 54/89 (60%), Positives = 69/89 (77%), Gaps = 3/89 (3%)
Frame = +3
Query: 117 KAAAMVDAVTIEKLEAGFSKLQGSES---KSLLKKYLTKEVFEALKNKKTSFGSTLLDCI 287
+A + VDA TI+K+E ++KL G E KSLLKK+LTKEV E LK K+T G+TL DCI
Sbjct: 64 QAKSEVDAATIKKIEEAYAKLNGPEGAKCKSLLKKHLTKEVVEKLKTKRTKVGATLYDCI 123
Query: 288 QSGVENLDSGVRIYAPDAESYSVFAELFD 374
+SGV NLD+GV +YAPDAE+Y++FA LFD
Sbjct: 124 RSGVYNLDAGVGVYAPDAEAYTLFAPLFD 152
>AF043703-6|AAK21503.1| 399|Caenorhabditis elegans Hypothetical
protein W10C8.5 protein.
Length = 399
Score = 109 bits (262), Expect = 6e-25
Identities = 53/89 (59%), Positives = 69/89 (77%), Gaps = 3/89 (3%)
Frame = +3
Query: 117 KAAAMVDAVTIEKLEAGFSKLQGSES---KSLLKKYLTKEVFEALKNKKTSFGSTLLDCI 287
+A + VDA TI+K+E ++KL G E KSLLKK+LTK+V E LK K+T G+TL DCI
Sbjct: 36 QAKSEVDAATIKKIEEAYAKLNGPEGAKCKSLLKKHLTKDVVEKLKTKRTKLGATLYDCI 95
Query: 288 QSGVENLDSGVRIYAPDAESYSVFAELFD 374
+SGV NLD+GV +YAPDAE+Y++FA LFD
Sbjct: 96 RSGVYNLDAGVGVYAPDAEAYTLFAPLFD 124
>U41543-2|AAO21426.1| 359|Caenorhabditis elegans Hypothetical
protein F46H5.3b protein.
Length = 359
Score = 105 bits (251), Expect = 1e-23
Identities = 51/78 (65%), Positives = 62/78 (79%), Gaps = 1/78 (1%)
Frame = +3
Query: 147 IEKLEAGFSKLQGS-ESKSLLKKYLTKEVFEALKNKKTSFGSTLLDCIQSGVENLDSGVR 323
I K+E G++KLQ + E SLLKKYLTKEV + LK+KKT G+ LLD IQSGV NLDSGV
Sbjct: 8 IAKIEEGYAKLQAAPECHSLLKKYLTKEVVDQLKDKKTKLGANLLDVIQSGVANLDSGVG 67
Query: 324 IYAPDAESYSVFAELFDP 377
+YAPDAE+Y++F LFDP
Sbjct: 68 VYAPDAEAYTLFKPLFDP 85
>U41543-1|AAB37022.2| 396|Caenorhabditis elegans Hypothetical
protein F46H5.3a protein.
Length = 396
Score = 105 bits (251), Expect = 1e-23
Identities = 51/78 (65%), Positives = 62/78 (79%), Gaps = 1/78 (1%)
Frame = +3
Query: 147 IEKLEAGFSKLQGS-ESKSLLKKYLTKEVFEALKNKKTSFGSTLLDCIQSGVENLDSGVR 323
I K+E G++KLQ + E SLLKKYLTKEV + LK+KKT G+ LLD IQSGV NLDSGV
Sbjct: 45 IAKIEEGYAKLQAAPECHSLLKKYLTKEVVDQLKDKKTKLGANLLDVIQSGVANLDSGVG 104
Query: 324 IYAPDAESYSVFAELFDP 377
+YAPDAE+Y++F LFDP
Sbjct: 105 VYAPDAEAYTLFKPLFDP 122
>Z75714-4|CAB00062.1| 360|Caenorhabditis elegans Hypothetical
protein ZC434.8 protein.
Length = 360
Score = 98.3 bits (234), Expect = 2e-21
Identities = 49/77 (63%), Positives = 62/77 (80%), Gaps = 1/77 (1%)
Frame = +3
Query: 150 EKLEAGFSKLQG-SESKSLLKKYLTKEVFEALKNKKTSFGSTLLDCIQSGVENLDSGVRI 326
+ +E ++KLQG S+ SLLKK+LTK+V K+KKT G+TLLD IQSG ENLDSGV I
Sbjct: 9 KSIEEVYTKLQGASDCSSLLKKHLTKDVVAKNKSKKTRLGATLLDVIQSGGENLDSGVGI 68
Query: 327 YAPDAESYSVFAELFDP 377
YAPDAESY++FA+LF+P
Sbjct: 69 YAPDAESYTLFADLFNP 85
>Z83109-2|CAB05517.1| 372|Caenorhabditis elegans Hypothetical
protein F44G3.2 protein.
Length = 372
Score = 89.4 bits (212), Expect = 7e-19
Identities = 46/84 (54%), Positives = 58/84 (69%), Gaps = 3/84 (3%)
Frame = +3
Query: 132 VDAVTIEKLEAGFSKLQGSES---KSLLKKYLTKEVFEALKNKKTSFGSTLLDCIQSGVE 302
VD VTI+K+E + L G + SLLKK LTK+V E LK K T G+ L DCI+SGV
Sbjct: 14 VDPVTIKKIEEAYVMLNGPDGAKCSSLLKKNLTKDVIEKLKTKSTKLGANLYDCIRSGVY 73
Query: 303 NLDSGVRIYAPDAESYSVFAELFD 374
LD+ V +YAPDAE+Y++FA LFD
Sbjct: 74 CLDALVGVYAPDAEAYTLFAPLFD 97
>AF106575-6|AAC78175.2| 244|Caenorhabditis elegans Hypothetical
protein K04F1.1 protein.
Length = 244
Score = 66.9 bits (156), Expect = 4e-12
Identities = 34/75 (45%), Positives = 49/75 (65%), Gaps = 3/75 (4%)
Frame = +3
Query: 117 KAAAMVDAVTIEKLEAGFSKLQGSES---KSLLKKYLTKEVFEALKNKKTSFGSTLLDCI 287
+A + VDA TI+K+E + KL G E KSLL+KYLTK++ E LK K T G+++ DCI
Sbjct: 86 QAKSEVDAATIKKIEEAYVKLNGPEGAKCKSLLRKYLTKDIVEKLKTKCTKLGASVYDCI 145
Query: 288 QSGVENLDSGVRIYA 332
+G+ + G+R A
Sbjct: 146 LTGLRFVRQGLRFVA 160
>Z78536-2|CAB01716.1| 363|Caenorhabditis elegans Hypothetical
protein C07A4.3 protein.
Length = 363
Score = 30.7 bits (66), Expect = 0.36
Identities = 18/77 (23%), Positives = 34/77 (44%), Gaps = 1/77 (1%)
Frame = -2
Query: 289 WMQSSRVEPNEVFLFLRASKTSLVRYFFNSDFDSEPWSLLKPASNFSMVTASTIAAAFP- 113
W+ S P + F +++ + R+ N FD P+S+ +S+ S + F
Sbjct: 98 WVDRSNKTPRQTFFRCSPTRSQVSRFLLNIIFDFVPFSICFISSHRSQSQQRSATNVFKM 157
Query: 112 FASSAGLFPLFSLVAQP 62
F S +G+ P + + P
Sbjct: 158 FVSISGVDPELTKLTNP 174
>Z49968-1|CAA90258.2| 499|Caenorhabditis elegans Hypothetical
protein M110.1 protein.
Length = 499
Score = 27.9 bits (59), Expect = 2.5
Identities = 13/37 (35%), Positives = 21/37 (56%)
Frame = -2
Query: 175 LLKPASNFSMVTASTIAAAFPFASSAGLFPLFSLVAQ 65
+L P S S++ ST+ + F F ++ L PLF + Q
Sbjct: 1 MLVPHSPQSILVVSTVISTFTFLATITLLPLFYMKVQ 37
>AC024770-5|AAK84605.2| 684|Caenorhabditis elegans Hypothetical
protein Y39H10A.6 protein.
Length = 684
Score = 27.9 bits (59), Expect = 2.5
Identities = 17/48 (35%), Positives = 25/48 (52%)
Frame = -1
Query: 374 IEQLGKHRVRLRVRGVDSDTRVQVLYT*LDAIQQGRAK*GLFILKGFE 231
IE RVR + + D +Q+L T D I + AK G +I+K F+
Sbjct: 85 IETTSGARVRANILKGNYDAAIQILETSNDHITEETAKHGSYIVKCFK 132
>Z83217-5|CAB05684.2| 1565|Caenorhabditis elegans Hypothetical
protein C10C6.1 protein.
Length = 1565
Score = 26.6 bits (56), Expect = 5.9
Identities = 12/42 (28%), Positives = 23/42 (54%)
Frame = -2
Query: 376 GSNSSANTEYDSASGA*ILTPESKFSTPDWMQSSRVEPNEVF 251
GSNS +++Y S+ + +++ S P SSR + N+ +
Sbjct: 210 GSNSGVSSQYSSSEQIGEMLDQTRISGPVRQNSSRFDSNDSY 251
>Z68135-1|CAA92227.1| 325|Caenorhabditis elegans Hypothetical
protein ZK1073.1 protein.
Length = 325
Score = 26.6 bits (56), Expect = 5.9
Identities = 10/36 (27%), Positives = 21/36 (58%)
Frame = -1
Query: 167 TSLQFLDGYGVHHCCGFSVRLVRRFVSLILFSCTAT 60
+++ F +G G + C F++ R + ++L CT+T
Sbjct: 107 SAIAFGEGVGANIICRFAMGHPNRIMGIVLVHCTST 142
>AM086627-1|CAJ31105.1| 1565|Caenorhabditis elegans KIN-4 protein
protein.
Length = 1565
Score = 26.6 bits (56), Expect = 5.9
Identities = 12/42 (28%), Positives = 23/42 (54%)
Frame = -2
Query: 376 GSNSSANTEYDSASGA*ILTPESKFSTPDWMQSSRVEPNEVF 251
GSNS +++Y S+ + +++ S P SSR + N+ +
Sbjct: 210 GSNSGVSSQYSSSEQIGEMLDQTRISGPVRQNSSRFDSNDSY 251
Database: celegans
Posted date: Oct 23, 2007 1:18 PM
Number of letters in database: 12,740,198
Number of sequences in database: 27,780
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 8,212,856
Number of Sequences: 27780
Number of extensions: 153605
Number of successful extensions: 565
Number of sequences better than 10.0: 13
Number of HSP's better than 10.0 without gapping: 541
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 561
length of database: 12,740,198
effective HSP length: 73
effective length of database: 10,712,258
effective search space used: 557037416
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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