Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= S06A01NCLL0023_K09
(112 letters)
Database: mosquito
2352 sequences; 563,979 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
AB090815-2|BAC57906.1| 973|Anopheles gambiae reverse transcript... 38 6e-05
AB090814-2|BAC57904.1| 1049|Anopheles gambiae reverse transcript... 35 3e-04
M93691-2|AAA29365.1| 1222|Anopheles gambiae protein ( Anopheles ... 28 0.034
AB090819-2|BAC57914.1| 1022|Anopheles gambiae reverse transcript... 28 0.034
AB090813-2|BAC57902.1| 1099|Anopheles gambiae reverse transcript... 23 0.98
AJ549085-1|CAD70159.1| 529|Anopheles gambiae thioredoxin-disulf... 23 1.7
AJ549084-1|CAD70158.1| 505|Anopheles gambiae thioredoxin-disulf... 23 1.7
AJ459821-1|CAD30858.1| 502|Anopheles gambiae thioredoxin reduct... 23 1.7
AJ970245-1|CAI96717.1| 134|Anopheles gambiae putative reverse t... 20 9.1
AJ441131-5|CAD29634.1| 574|Anopheles gambiae putative Na+ chann... 20 9.1
AJ439398-4|CAD28127.1| 572|Anopheles gambiae putative sodium ch... 20 9.1
>AB090815-2|BAC57906.1| 973|Anopheles gambiae reverse transcriptase
protein.
Length = 973
Score = 37.5 bits (83), Expect = 6e-05
Identities = 18/36 (50%), Positives = 24/36 (66%)
Frame = +3
Query: 3 IMLNQLVEYFRAEKILDDRQFGFTKSKSTTDAGATL 110
++LN+LV Y E L DRQFGF K +ST +A A +
Sbjct: 486 LILNRLVVYTEGEHGLSDRQFGFRKGRSTGEAIAAV 521
>AB090814-2|BAC57904.1| 1049|Anopheles gambiae reverse transcriptase
protein.
Length = 1049
Score = 35.1 bits (77), Expect = 3e-04
Identities = 15/32 (46%), Positives = 21/32 (65%)
Frame = +3
Query: 3 IMLNQLVEYFRAEKILDDRQFGFTKSKSTTDA 98
++L++L +Y L DRQFGF K +ST DA
Sbjct: 547 VILDRLTKYTEGPHGLSDRQFGFRKKRSTVDA 578
>M93691-2|AAA29365.1| 1222|Anopheles gambiae protein ( Anopheles
gambiae RT2 retroposon. ).
Length = 1222
Score = 28.3 bits (60), Expect = 0.034
Identities = 14/34 (41%), Positives = 21/34 (61%), Gaps = 2/34 (5%)
Frame = +3
Query: 3 IMLNQLVEYFR--AEKILDDRQFGFTKSKSTTDA 98
++LN+L E+ + L DRQFGF + +ST A
Sbjct: 566 LILNRLNEHLEEPSSPRLSDRQFGFRRGRSTVSA 599
>AB090819-2|BAC57914.1| 1022|Anopheles gambiae reverse transcriptase
protein.
Length = 1022
Score = 28.3 bits (60), Expect = 0.034
Identities = 11/32 (34%), Positives = 21/32 (65%)
Frame = +3
Query: 3 IMLNQLVEYFRAEKILDDRQFGFTKSKSTTDA 98
++L++L + + L + Q+GF K ++TTDA
Sbjct: 495 VILHRLNNHIERVQGLSENQYGFRKGRATTDA 526
>AB090813-2|BAC57902.1| 1099|Anopheles gambiae reverse transcriptase
protein.
Length = 1099
Score = 23.4 bits (48), Expect = 0.98
Identities = 12/31 (38%), Positives = 19/31 (61%), Gaps = 2/31 (6%)
Frame = +3
Query: 3 IMLNQLVEYFRAEKI--LDDRQFGFTKSKST 89
++LN+L E+ + L DRQ+GF + ST
Sbjct: 506 LILNRLHEFLEDPESPRLSDRQYGFRRGCST 536
>AJ549085-1|CAD70159.1| 529|Anopheles gambiae thioredoxin-disulfide
reductase protein.
Length = 529
Score = 22.6 bits (46), Expect = 1.7
Identities = 10/17 (58%), Positives = 12/17 (70%)
Frame = -1
Query: 97 ASVVDLDFVKPNCRSSK 47
A V LDFVKP+ R +K
Sbjct: 61 AKVAVLDFVKPSPRGTK 77
>AJ549084-1|CAD70158.1| 505|Anopheles gambiae
thioredoxin-disulfide reductase protein.
Length = 505
Score = 22.6 bits (46), Expect = 1.7
Identities = 10/17 (58%), Positives = 12/17 (70%)
Frame = -1
Query: 97 ASVVDLDFVKPNCRSSK 47
A V LDFVKP+ R +K
Sbjct: 37 AKVAVLDFVKPSPRGTK 53
>AJ459821-1|CAD30858.1| 502|Anopheles gambiae thioredoxin
reductase protein.
Length = 502
Score = 22.6 bits (46), Expect = 1.7
Identities = 10/17 (58%), Positives = 12/17 (70%)
Frame = -1
Query: 97 ASVVDLDFVKPNCRSSK 47
A V LDFVKP+ R +K
Sbjct: 34 AKVAVLDFVKPSPRGTK 50
>AJ970245-1|CAI96717.1| 134|Anopheles gambiae putative reverse
transcriptase protein.
Length = 134
Score = 20.2 bits (40), Expect = 9.1
Identities = 9/16 (56%), Positives = 10/16 (62%)
Frame = +3
Query: 45 ILDDRQFGFTKSKSTT 92
I+ QFGF S STT
Sbjct: 32 IIPKSQFGFRPSLSTT 47
>AJ441131-5|CAD29634.1| 574|Anopheles gambiae putative Na+ channel
protein.
Length = 574
Score = 20.2 bits (40), Expect = 9.1
Identities = 8/10 (80%), Positives = 8/10 (80%)
Frame = -3
Query: 89 GRFGFRETKL 60
GRFG RET L
Sbjct: 444 GRFGIRETLL 453
>AJ439398-4|CAD28127.1| 572|Anopheles gambiae putative sodium
channel protein.
Length = 572
Score = 20.2 bits (40), Expect = 9.1
Identities = 8/10 (80%), Positives = 8/10 (80%)
Frame = -3
Query: 89 GRFGFRETKL 60
GRFG RET L
Sbjct: 444 GRFGIRETLL 453
Database: mosquito
Posted date: Oct 23, 2007 1:18 PM
Number of letters in database: 563,979
Number of sequences in database: 2352
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 95,929
Number of Sequences: 2352
Number of extensions: 820
Number of successful extensions: 11
Number of sequences better than 10.0: 11
Number of HSP's better than 10.0 without gapping: 11
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 11
length of database: 563,979
effective HSP length: 17
effective length of database: 523,995
effective search space used: 9955905
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 40 (21.2 bits)
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