Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= S06A01NCLL0023_K07
(322 letters)
Database: rice
37,544 sequences; 14,793,348 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
03_02_0976 + 12841257-12841306,12841396-12841528,12842126-12842191 68 1e-12
03_05_0610 - 26108546-26108671,26108739-26108789,26109410-261095... 66 4e-12
11_01_0223 + 1746203-1746228,1746344-1746463,1746942-1747062,174... 29 0.62
01_06_1554 + 38217297-38217539,38217783-38218352,38218439-38219008 29 0.81
02_04_0221 - 21021886-21022144,21022227-21022345,21022681-210229... 29 1.1
01_06_1035 + 33964570-33964758,33965664-33965759,33965855-339659... 28 1.4
09_02_0363 - 7871730-7871853,7871986-7872075,7872720-7872799,787... 27 2.5
08_02_0386 - 16575636-16575698,16575799-16575858,16575947-165762... 27 2.5
08_01_0619 + 5412058-5413224,5413357-5413476,5413755-5413831,541... 27 2.5
07_01_1084 + 9885562-9885696,9885762-9886220,9886269-9886619 27 2.5
05_01_0040 - 273384-273437,273920-274102,274465-274677,275479-27... 27 2.5
10_01_0236 + 2486371-2486952 27 3.3
06_03_0395 - 20354713-20355570 27 3.3
02_02_0739 - 13560241-13560622,13561192-13561239,13563727-13564949 27 3.3
01_07_0239 + 42222024-42222133,42222220-42222301,42222396-422224... 27 4.3
01_06_0608 + 30575897-30576142,30576252-30576755 27 4.3
07_03_0770 - 21375099-21375122,21375321-21375448,21375541-213756... 26 5.7
03_06_0580 - 34877496-34877723 26 5.7
01_05_0335 + 21074117-21074241,21074299-21074929,21075359-210753... 26 5.7
11_06_0129 - 20397179-20397537,20397749-20400497 26 7.6
11_02_0062 - 7909343-7909413,7909509-7910974,7911064-7912088,791... 26 7.6
09_06_0196 - 21481662-21481720,21481898-21483245 26 7.6
09_04_0305 - 16516481-16516638,16517135-16517274,16519196-16520148 26 7.6
05_07_0144 - 28007477-28008412 26 7.6
>03_02_0976 + 12841257-12841306,12841396-12841528,12842126-12842191
Length = 82
Score = 68.1 bits (159), Expect = 1e-12
Identities = 34/66 (51%), Positives = 43/66 (65%)
Frame = +1
Query: 31 MQNDAGEFVDLYCPRKCSASNRLIHAKDHASVQLVIADVDPATGRAADSSKMYVVCGAIR 210
MQN+ G+ VDLY PRKCSA+NR+I AKDHASVQ+ I VD G + + G IR
Sbjct: 1 MQNEEGQMVDLYVPRKCSATNRIITAKDHASVQINIGHVD-ENGLYDGRFTTFALSGFIR 59
Query: 211 RMGESD 228
G++D
Sbjct: 60 AQGDAD 65
>03_05_0610 -
26108546-26108671,26108739-26108789,26109410-26109542,
26109633-26109682
Length = 119
Score = 66.5 bits (155), Expect = 4e-12
Identities = 33/66 (50%), Positives = 42/66 (63%)
Frame = +1
Query: 31 MQNDAGEFVDLYCPRKCSASNRLIHAKDHASVQLVIADVDPATGRAADSSKMYVVCGAIR 210
MQN+ G+ VDLY PRKCS +NR+I AKDHASVQ+ I VD G + + G IR
Sbjct: 1 MQNEEGQMVDLYVPRKCSTTNRIITAKDHASVQINIGHVD-ENGLYDGRFTTFALSGFIR 59
Query: 211 RMGESD 228
G++D
Sbjct: 60 AQGDAD 65
>11_01_0223 +
1746203-1746228,1746344-1746463,1746942-1747062,
1747441-1747572,1748266-1748375,1748465-1748648,
1749153-1749305,1749672-1749818
Length = 330
Score = 29.5 bits (63), Expect = 0.62
Identities = 13/33 (39%), Positives = 17/33 (51%)
Frame = -1
Query: 121 MRGPSHGSDDYSPSISLGSTSQRIHQRRSAFCV 23
MR P+ G D P + LG HQ+ SA C+
Sbjct: 262 MREPAGGDDVSRPMLFLGEVMSHEHQKGSASCI 294
>01_06_1554 + 38217297-38217539,38217783-38218352,38218439-38219008
Length = 460
Score = 29.1 bits (62), Expect = 0.81
Identities = 17/72 (23%), Positives = 29/72 (40%)
Frame = -1
Query: 217 PSCEWLHRPRTSWRSQQHVRLQGPRPLSRAAPMRGPSHGSDDYSPSISLGSTSQRIHQRR 38
P E H P+T WR H + G +S + PS S ++ + + +RR
Sbjct: 62 PKMETSHEPQTPWRLAVHPAVVGTVRVSGCGAVVAPSRRQCRVSAAVLTAAETATATRRR 121
Query: 37 SAFCVSKPRAEL 2
+ +AE+
Sbjct: 122 VTHSMPPEKAEV 133
>02_04_0221 -
21021886-21022144,21022227-21022345,21022681-21022920,
21023064-21023171,21023272-21023331,21023991-21024066,
21024155-21024360,21024722-21024784,21024925-21025012,
21025515-21026015,21027206-21027603
Length = 705
Score = 28.7 bits (61), Expect = 1.1
Identities = 16/38 (42%), Positives = 20/38 (52%)
Frame = -1
Query: 193 PRTSWRSQQHVRLQGPRPLSRAAPMRGPSHGSDDYSPS 80
PR QH L PRP+S++APM S + SPS
Sbjct: 69 PRCPGPQDQHHGLPLPRPVSKSAPMPLASPAAAPPSPS 106
>01_06_1035 +
33964570-33964758,33965664-33965759,33965855-33965923,
33966644-33966748,33966852-33966908,33967065-33967265,
33967915-33968007,33968070-33968169,33968322-33968421,
33968869-33968954,33969294-33969403
Length = 401
Score = 28.3 bits (60), Expect = 1.4
Identities = 15/38 (39%), Positives = 19/38 (50%)
Frame = -1
Query: 166 HVRLQGPRPLSRAAPMRGPSHGSDDYSPSISLGSTSQR 53
H+ Q PL+RA P H SPS+ LGS + R
Sbjct: 6 HLLSQSLYPLNRANPAAARGHLRFQASPSVRLGSGTSR 43
>09_02_0363 -
7871730-7871853,7871986-7872075,7872720-7872799,
7872881-7872964,7874944-7874992,7875114-7875240,
7875798-7875934,7876004-7876050,7876126-7876185,
7876810-7876862,7878205-7878269,7879050-7879174,
7879307-7879366,7879670-7879806,7880737-7880805,
7880889-7881045,7881121-7881235,7881855-7881916
Length = 546
Score = 27.5 bits (58), Expect = 2.5
Identities = 14/44 (31%), Positives = 23/44 (52%), Gaps = 1/44 (2%)
Frame = +1
Query: 109 KDHASVQLVIADV-DPATGRAADSSKMYVVCGAIRRMGESDDCS 237
KD+ VI DV + AT RA + + + CG + + ++CS
Sbjct: 81 KDYTEATFVIPDVKNLATSRACSLNIILISCGRAEQTFDDNNCS 124
>08_02_0386 -
16575636-16575698,16575799-16575858,16575947-16576239,
16576361-16576517,16576601-16576948,16577047-16577177,
16577417-16577882,16578425-16579132
Length = 741
Score = 27.5 bits (58), Expect = 2.5
Identities = 22/62 (35%), Positives = 29/62 (46%), Gaps = 4/62 (6%)
Frame = -2
Query: 180 GGVSSTSGCRVHVRYH-ELHRCVVLRMDQTIT---RRAFPWAVQVNEFTSVVLHFVYLSL 13
GG SS+S V +H +H R ++ RRA PWA +E T VVL +
Sbjct: 103 GGSSSSSTATARVPFHLPIHPPPPEREEEEEKKGIRRAVPWAAARDEETKVVLRREKKTR 162
Query: 12 VP 7
VP
Sbjct: 163 VP 164
>08_01_0619 +
5412058-5413224,5413357-5413476,5413755-5413831,
5414201-5414321
Length = 494
Score = 27.5 bits (58), Expect = 2.5
Identities = 13/37 (35%), Positives = 20/37 (54%)
Frame = -1
Query: 220 LPSCEWLHRPRTSWRSQQHVRLQGPRPLSRAAPMRGP 110
L + E L++ SW Q+ RL+ P PL+ P + P
Sbjct: 228 LATFEGLYKEALSWFEQECQRLEPPMPLALPPPPQPP 264
>07_01_1084 + 9885562-9885696,9885762-9886220,9886269-9886619
Length = 314
Score = 27.5 bits (58), Expect = 2.5
Identities = 15/47 (31%), Positives = 21/47 (44%)
Frame = -2
Query: 297 CERALQ*FLASIPSFLVSLTTAVVGLSHPANGSTDHVHLGGVSSTSG 157
CER Q L +IP F+ +T G HPA L ++ +G
Sbjct: 40 CERLSQRRLETIPFFVADITVPAAG-RHPARSGRGGTDLAVAAAATG 85
>05_01_0040 -
273384-273437,273920-274102,274465-274677,275479-276294,
276431-276823,277233-277238
Length = 554
Score = 27.5 bits (58), Expect = 2.5
Identities = 19/68 (27%), Positives = 32/68 (47%)
Frame = -1
Query: 214 SCEWLHRPRTSWRSQQHVRLQGPRPLSRAAPMRGPSHGSDDYSPSISLGSTSQRIHQRRS 35
S W +R + S Q RPLS +G S+G+ +IS G +++++ S
Sbjct: 211 SHHWHYRDKIPLHSGQWCHDAEARPLSNY--QQGASYGNGRLRDNISRGGRNEQVNIISS 268
Query: 34 AFCVSKPR 11
++KPR
Sbjct: 269 RRTMTKPR 276
>10_01_0236 + 2486371-2486952
Length = 193
Score = 27.1 bits (57), Expect = 3.3
Identities = 17/56 (30%), Positives = 25/56 (44%), Gaps = 4/56 (7%)
Frame = -1
Query: 202 LHRPRTSWRSQQHVRL-QGPRPLSRAAPMRGP---SHGSDDYSPSISLGSTSQRIH 47
+ +PRT + R Q RPL RAAP+ P + DD ++ G +H
Sbjct: 108 IKKPRTPRSGEGQARAPQRRRPLERAAPLPPPAAVAEALDDLEREVTRGFVEDLLH 163
>06_03_0395 - 20354713-20355570
Length = 285
Score = 27.1 bits (57), Expect = 3.3
Identities = 15/57 (26%), Positives = 24/57 (42%)
Frame = -1
Query: 292 TRTSVVLSQYPVFLSEPDYCSRRTLPSCEWLHRPRTSWRSQQHVRLQGPRPLSRAAP 122
T T+ ++ P R P C+ HR + R ++ R + P P + AAP
Sbjct: 29 TTTAAAAVEHSATSPSPSSPRTRLFPRCQRRHRLHSHGRHRRCHRREPPPPQTAAAP 85
>02_02_0739 - 13560241-13560622,13561192-13561239,13563727-13564949
Length = 550
Score = 27.1 bits (57), Expect = 3.3
Identities = 13/22 (59%), Positives = 16/22 (72%)
Frame = -3
Query: 197 QTTYILEESAARPVAGSTSAIT 132
Q T ILEE+ +P+ STSAIT
Sbjct: 510 QITNILEENVVQPLLVSTSAIT 531
>01_07_0239 +
42222024-42222133,42222220-42222301,42222396-42222486,
42222702-42222814,42222912-42222984,42223080-42223178,
42223201-42223406,42223693-42223832,42223912-42223969,
42224067-42224137,42224207-42224741
Length = 525
Score = 26.6 bits (56), Expect = 4.3
Identities = 18/58 (31%), Positives = 27/58 (46%), Gaps = 9/58 (15%)
Frame = -1
Query: 256 FLSEPDYCSRRTLPSCEWLHRPRTSWRSQQH---------VRLQGPRPLSRAAPMRGP 110
F ++P C ++LP E H +T + QQ +LQ P P SR P++ P
Sbjct: 337 FWTDPLPCDPKSLPKYEASHEFQTKKKRQQQRQAEEAAKRQKLQHPPPHSRLPPIQNP 394
>01_06_0608 + 30575897-30576142,30576252-30576755
Length = 249
Score = 26.6 bits (56), Expect = 4.3
Identities = 17/36 (47%), Positives = 22/36 (61%), Gaps = 3/36 (8%)
Frame = +3
Query: 51 IR*LVLPKEML---GE*SSDPCEGPRIGAARDSGRG 149
+R ++ KE L G SDPC+ RIGA D+GRG
Sbjct: 186 LRAMLAKKEELAAAGNNGSDPCKRRRIGA--DTGRG 219
>07_03_0770 -
21375099-21375122,21375321-21375448,21375541-21375672,
21377016-21377874
Length = 380
Score = 26.2 bits (55), Expect = 5.7
Identities = 13/28 (46%), Positives = 16/28 (57%), Gaps = 1/28 (3%)
Frame = +3
Query: 84 GE*SSDPCEGPRIGAARDSGRGP-CNRT 164
G+ SS C G +RD+ GP CNRT
Sbjct: 89 GDLSSSDCAGCGTNVSRDAVAGPTCNRT 116
>03_06_0580 - 34877496-34877723
Length = 75
Score = 26.2 bits (55), Expect = 5.7
Identities = 16/44 (36%), Positives = 21/44 (47%), Gaps = 3/44 (6%)
Frame = -1
Query: 214 SCEWLHRPRTSWRSQQHVRLQGPRPLSR---AAPMRGPSHGSDD 92
S W H + + R + R G +R +A RGPSHG DD
Sbjct: 11 SGSWAHEVKQALRDKLR-RAYGTAGAARPAASAVSRGPSHGGDD 53
>01_05_0335 +
21074117-21074241,21074299-21074929,21075359-21075399,
21078458-21078560,21078755-21079601,21079938-21080689,
21080712-21080970,21081011-21081354
Length = 1033
Score = 26.2 bits (55), Expect = 5.7
Identities = 14/39 (35%), Positives = 17/39 (43%)
Frame = +3
Query: 105 CEGPRIGAARDSGRGPCNRTCC*LLQDVRGLWSHSQDGR 221
C G I + D + P C Q VRG W H + GR
Sbjct: 90 CGGSNIVHSNDECKQPAQMWCG---QRVRGKWFHRESGR 125
>11_06_0129 - 20397179-20397537,20397749-20400497
Length = 1035
Score = 25.8 bits (54), Expect = 7.6
Identities = 13/41 (31%), Positives = 21/41 (51%)
Frame = -3
Query: 155 AGSTSAITSCTDAWSFAWIRRLLAEHFLGQYKSTNSPASFC 33
AGS+S+ + D + + +L+ LG S NS + FC
Sbjct: 20 AGSSSSSNATADELALLSFKSMLSSPSLGLMASWNSSSHFC 60
>11_02_0062 -
7909343-7909413,7909509-7910974,7911064-7912088,
7912300-7912809,7913418-7913441,7913617-7913673
Length = 1050
Score = 25.8 bits (54), Expect = 7.6
Identities = 16/48 (33%), Positives = 27/48 (56%)
Frame = -1
Query: 226 RTLPSCEWLHRPRTSWRSQQHVRLQGPRPLSRAAPMRGPSHGSDDYSP 83
R+LP+ L P +S + +RL G + S +AP GP+ G++ +P
Sbjct: 132 RSLPASALLP-PYSSASTPLLIRLPGGQADSTSAPSLGPAVGNEPTTP 178
>09_06_0196 - 21481662-21481720,21481898-21483245
Length = 468
Score = 25.8 bits (54), Expect = 7.6
Identities = 9/26 (34%), Positives = 17/26 (65%)
Frame = -1
Query: 136 SRAAPMRGPSHGSDDYSPSISLGSTS 59
+R P++ HGS +PS++L ++S
Sbjct: 80 NRGTPVKDGGHGSSSSAPSLTLSNSS 105
>09_04_0305 - 16516481-16516638,16517135-16517274,16519196-16520148
Length = 416
Score = 25.8 bits (54), Expect = 7.6
Identities = 12/27 (44%), Positives = 15/27 (55%)
Frame = -1
Query: 181 WRSQQHVRLQGPRPLSRAAPMRGPSHG 101
W+ H+RL RP S AAP+ P G
Sbjct: 20 WQLFNHIRLFALRPSSYAAPVWFPVRG 46
>05_07_0144 - 28007477-28008412
Length = 311
Score = 25.8 bits (54), Expect = 7.6
Identities = 12/24 (50%), Positives = 16/24 (66%)
Frame = -3
Query: 209 RMAPQTTYILEESAARPVAGSTSA 138
++APQTT I ++A V STSA
Sbjct: 53 QLAPQTTTITTSNSAAAVGNSTSA 76
Database: rice
Posted date: Oct 4, 2007 10:57 AM
Number of letters in database: 14,793,348
Number of sequences in database: 37,544
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 9,490,000
Number of Sequences: 37544
Number of extensions: 197049
Number of successful extensions: 780
Number of sequences better than 10.0: 24
Number of HSP's better than 10.0 without gapping: 772
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 780
length of database: 14,793,348
effective HSP length: 72
effective length of database: 12,090,180
effective search space used: 411066120
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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