Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= S06A01NCLL0023_K07
(322 letters)
Database: celegans
27,780 sequences; 12,740,198 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
U00033-12|AAC48297.2| 88|Caenorhabditis elegans Ribosomal prot... 98 1e-21
U27312-10|AAA68253.1| 231|Caenorhabditis elegans Hypothetical p... 29 0.99
Z81109-2|CAB03244.1| 408|Caenorhabditis elegans Hypothetical pr... 27 3.0
Z94800-1|CAB08161.2| 491|Caenorhabditis elegans Hypothetical pr... 27 4.0
Z82288-9|CAB05328.2| 491|Caenorhabditis elegans Hypothetical pr... 27 4.0
Z73104-9|CAA97438.2| 491|Caenorhabditis elegans Hypothetical pr... 27 4.0
AL034365-5|CAA22258.1| 172|Caenorhabditis elegans Hypothetical ... 27 4.0
Z69792-5|CAA93668.3| 1410|Caenorhabditis elegans Hypothetical pr... 26 5.3
AL022270-3|CAB63434.2| 1410|Caenorhabditis elegans Hypothetical ... 26 5.3
Z92829-10|CAB07350.2| 319|Caenorhabditis elegans Hypothetical p... 26 7.0
Z75550-9|CAE54924.1| 1291|Caenorhabditis elegans Hypothetical pr... 26 7.0
Z75550-8|CAA99926.1| 1307|Caenorhabditis elegans Hypothetical pr... 26 7.0
Z73103-3|CAA97423.1| 540|Caenorhabditis elegans Hypothetical pr... 26 7.0
AM748824-1|CAO72178.1| 512|Caenorhabditis elegans hexosaminidas... 26 7.0
AL034393-11|CAA22324.2| 2417|Caenorhabditis elegans Hypothetical... 26 7.0
AL033513-1|CAA22078.2| 512|Caenorhabditis elegans Hypothetical ... 26 7.0
AJ250261-1|CAB59919.1| 2417|Caenorhabditis elegans hypothetical ... 26 7.0
Z66513-10|CAH19084.1| 488|Caenorhabditis elegans Hypothetical p... 25 9.2
Z66513-9|CAH19083.1| 561|Caenorhabditis elegans Hypothetical pr... 25 9.2
Z66513-8|CAA91340.2| 563|Caenorhabditis elegans Hypothetical pr... 25 9.2
>U00033-12|AAC48297.2| 88|Caenorhabditis elegans Ribosomal
protein, small subunitprotein 21 protein.
Length = 88
Score = 97.9 bits (233), Expect = 1e-21
Identities = 46/68 (67%), Positives = 52/68 (76%), Gaps = 1/68 (1%)
Frame = +1
Query: 31 MQNDAGEFVDLYCPRKCSASNRLIHAKDHASVQLVIADVDPATGR-AADSSKMYVVCGAI 207
MQNDAG+ V+LY PRKCS+SNR+I KDHASVQ+ DVDP TGR S Y +CGAI
Sbjct: 1 MQNDAGQTVELYVPRKCSSSNRIIGPKDHASVQIDFVDVDPETGRMIPGKSTRYAICGAI 60
Query: 208 RRMGESDD 231
RRMGESDD
Sbjct: 61 RRMGESDD 68
>U27312-10|AAA68253.1| 231|Caenorhabditis elegans Hypothetical
protein F26A1.12 protein.
Length = 231
Score = 28.7 bits (61), Expect = 0.99
Identities = 16/55 (29%), Positives = 23/55 (41%)
Frame = -1
Query: 187 TSWRSQQHVRLQGPRPLSRAAPMRGPSHGSDDYSPSISLGSTSQRIHQRRSAFCV 23
+S + H GPRP P R P +P+ S IH+RR +C+
Sbjct: 35 SSGEGRGHHHKHGPRPPRPNRPPRPPPATPPPTTPAPSCPGGWSLIHRRRGPWCI 89
>Z81109-2|CAB03244.1| 408|Caenorhabditis elegans Hypothetical
protein R10D12.2 protein.
Length = 408
Score = 27.1 bits (57), Expect = 3.0
Identities = 10/27 (37%), Positives = 13/27 (48%)
Frame = -3
Query: 104 WIRRLLAEHFLGQYKSTNSPASFCILC 24
WI +L L Y TN A C++C
Sbjct: 30 WINLILVSFTLNNYDQTNEVARTCLVC 56
>Z94800-1|CAB08161.2| 491|Caenorhabditis elegans Hypothetical
protein K08D8.6 protein.
Length = 491
Score = 26.6 bits (56), Expect = 4.0
Identities = 13/37 (35%), Positives = 21/37 (56%)
Frame = -1
Query: 112 PSHGSDDYSPSISLGSTSQRIHQRRSAFCVSKPRAEL 2
P H DY+ SIS +T Q+ + + F ++K +A L
Sbjct: 314 PLHKLADYTSSISKTNTPQKFSGKFTTFVLNKDQATL 350
>Z82288-9|CAB05328.2| 491|Caenorhabditis elegans Hypothetical
protein K08D8.6 protein.
Length = 491
Score = 26.6 bits (56), Expect = 4.0
Identities = 13/37 (35%), Positives = 21/37 (56%)
Frame = -1
Query: 112 PSHGSDDYSPSISLGSTSQRIHQRRSAFCVSKPRAEL 2
P H DY+ SIS +T Q+ + + F ++K +A L
Sbjct: 314 PLHKLADYTSSISKTNTPQKFSGKFTTFVLNKDQATL 350
>Z73104-9|CAA97438.2| 491|Caenorhabditis elegans Hypothetical
protein K08D8.6 protein.
Length = 491
Score = 26.6 bits (56), Expect = 4.0
Identities = 13/37 (35%), Positives = 21/37 (56%)
Frame = -1
Query: 112 PSHGSDDYSPSISLGSTSQRIHQRRSAFCVSKPRAEL 2
P H DY+ SIS +T Q+ + + F ++K +A L
Sbjct: 314 PLHKLADYTSSISKTNTPQKFSGKFTTFVLNKDQATL 350
>AL034365-5|CAA22258.1| 172|Caenorhabditis elegans Hypothetical
protein Y69E1A.5 protein.
Length = 172
Score = 26.6 bits (56), Expect = 4.0
Identities = 11/25 (44%), Positives = 14/25 (56%)
Frame = -1
Query: 271 SQYPVFLSEPDYCSRRTLPSCEWLH 197
S Y V + +PD SR+ EWLH
Sbjct: 61 SIYTVLMIDPDNLSRKNPSVAEWLH 85
>Z69792-5|CAA93668.3| 1410|Caenorhabditis elegans Hypothetical
protein F40E10.4 protein.
Length = 1410
Score = 26.2 bits (55), Expect = 5.3
Identities = 14/58 (24%), Positives = 24/58 (41%)
Frame = -3
Query: 200 PQTTYILEESAARPVAGSTSAITSCTDAWSFAWIRRLLAEHFLGQYKSTNSPASFCIL 27
PQ+ + S GS S C AW WI+ E + + + N+ ++ +L
Sbjct: 792 PQSAFSNLTSITHIAVGSNSLYCDCNMAWFSKWIKSKFIEAGIARCEYPNTVSNQLLL 849
>AL022270-3|CAB63434.2| 1410|Caenorhabditis elegans Hypothetical
protein F40E10.4 protein.
Length = 1410
Score = 26.2 bits (55), Expect = 5.3
Identities = 14/58 (24%), Positives = 24/58 (41%)
Frame = -3
Query: 200 PQTTYILEESAARPVAGSTSAITSCTDAWSFAWIRRLLAEHFLGQYKSTNSPASFCIL 27
PQ+ + S GS S C AW WI+ E + + + N+ ++ +L
Sbjct: 792 PQSAFSNLTSITHIAVGSNSLYCDCNMAWFSKWIKSKFIEAGIARCEYPNTVSNQLLL 849
>Z92829-10|CAB07350.2| 319|Caenorhabditis elegans Hypothetical
protein F10A3.15 protein.
Length = 319
Score = 25.8 bits (54), Expect = 7.0
Identities = 14/46 (30%), Positives = 23/46 (50%)
Frame = -3
Query: 149 STSAITSCTDAWSFAWIRRLLAEHFLGQYKSTNSPASFCILCI*AS 12
ST+ I S+ + +LA HF +Y S SP++ I + A+
Sbjct: 89 STAQIALAILCSSYGLVLTMLAIHFFYRYLSVKSPSNLSIFSLKAA 134
>Z75550-9|CAE54924.1| 1291|Caenorhabditis elegans Hypothetical protein
T22C1.10b protein.
Length = 1291
Score = 25.8 bits (54), Expect = 7.0
Identities = 19/65 (29%), Positives = 31/65 (47%)
Frame = -1
Query: 202 LHRPRTSWRSQQHVRLQGPRPLSRAAPMRGPSHGSDDYSPSISLGSTSQRIHQRRSAFCV 23
LH+ +T++R Q L +PL + H + + + L +T R H R+ FCV
Sbjct: 1040 LHQSKTAYRQDQFAILASRQPLVNFHLVLHHQHLA--LALRLQL-TTGLRFHPLRNLFCV 1096
Query: 22 SKPRA 8
+ RA
Sbjct: 1097 TGNRA 1101
>Z75550-8|CAA99926.1| 1307|Caenorhabditis elegans Hypothetical protein
T22C1.10a protein.
Length = 1307
Score = 25.8 bits (54), Expect = 7.0
Identities = 19/65 (29%), Positives = 31/65 (47%)
Frame = -1
Query: 202 LHRPRTSWRSQQHVRLQGPRPLSRAAPMRGPSHGSDDYSPSISLGSTSQRIHQRRSAFCV 23
LH+ +T++R Q L +PL + H + + + L +T R H R+ FCV
Sbjct: 1056 LHQSKTAYRQDQFAILASRQPLVNFHLVLHHQHLA--LALRLQL-TTGLRFHPLRNLFCV 1112
Query: 22 SKPRA 8
+ RA
Sbjct: 1113 TGNRA 1117
>Z73103-3|CAA97423.1| 540|Caenorhabditis elegans Hypothetical
protein C08F8.4 protein.
Length = 540
Score = 25.8 bits (54), Expect = 7.0
Identities = 8/20 (40%), Positives = 14/20 (70%)
Frame = -3
Query: 116 WSFAWIRRLLAEHFLGQYKS 57
W+ AW+RR++ E G Y++
Sbjct: 359 WTVAWLRRVVYERVEGPYRT 378
>AM748824-1|CAO72178.1| 512|Caenorhabditis elegans hexosaminidase
protein.
Length = 512
Score = 25.8 bits (54), Expect = 7.0
Identities = 12/43 (27%), Positives = 17/43 (39%), Gaps = 1/43 (2%)
Frame = -1
Query: 265 YPVFLSEPDYCSRRTL-PSCEWLHRPRTSWRSQQHVRLQGPRP 140
Y V S DY +T + W+H W H+R+ P
Sbjct: 394 YRVRDSIRDYVQLKTFFENSTWVHNRENGWLQSSHMRISASNP 436
>AL034393-11|CAA22324.2| 2417|Caenorhabditis elegans Hypothetical
protein Y18D10A.13 protein.
Length = 2417
Score = 25.8 bits (54), Expect = 7.0
Identities = 11/24 (45%), Positives = 15/24 (62%), Gaps = 2/24 (8%)
Frame = -2
Query: 129 LHRC--VVLRMDQTITRRAFPWAV 64
L RC VVLR D ++ RR + W +
Sbjct: 276 LRRCLFVVLRRDMSLNRRLYTWLI 299
>AL033513-1|CAA22078.2| 512|Caenorhabditis elegans Hypothetical
protein Y70D2A.2 protein.
Length = 512
Score = 25.8 bits (54), Expect = 7.0
Identities = 12/43 (27%), Positives = 17/43 (39%), Gaps = 1/43 (2%)
Frame = -1
Query: 265 YPVFLSEPDYCSRRTL-PSCEWLHRPRTSWRSQQHVRLQGPRP 140
Y V S DY +T + W+H W H+R+ P
Sbjct: 394 YRVRDSIRDYVQLKTFFENSTWVHNRENGWLQSSHMRISASNP 436
>AJ250261-1|CAB59919.1| 2417|Caenorhabditis elegans hypothetical
protein protein.
Length = 2417
Score = 25.8 bits (54), Expect = 7.0
Identities = 11/24 (45%), Positives = 15/24 (62%), Gaps = 2/24 (8%)
Frame = -2
Query: 129 LHRC--VVLRMDQTITRRAFPWAV 64
L RC VVLR D ++ RR + W +
Sbjct: 276 LRRCLFVVLRRDMSLNRRLYTWLI 299
>Z66513-10|CAH19084.1| 488|Caenorhabditis elegans Hypothetical
protein F54D5.15b protein.
Length = 488
Score = 25.4 bits (53), Expect = 9.2
Identities = 13/37 (35%), Positives = 19/37 (51%), Gaps = 1/37 (2%)
Frame = +3
Query: 198 WS-HSQDGRVRRLQ*SGSLRKTGYWLRTTEVRVRIRS 305
WS + +GRV Q G+ GYW R ++ R R+
Sbjct: 79 WSGRAMEGRVSGGQVRGTNNMRGYWERNIQIEQRQRA 115
>Z66513-9|CAH19083.1| 561|Caenorhabditis elegans Hypothetical
protein F54D5.15c protein.
Length = 561
Score = 25.4 bits (53), Expect = 9.2
Identities = 13/37 (35%), Positives = 19/37 (51%), Gaps = 1/37 (2%)
Frame = +3
Query: 198 WS-HSQDGRVRRLQ*SGSLRKTGYWLRTTEVRVRIRS 305
WS + +GRV Q G+ GYW R ++ R R+
Sbjct: 152 WSGRAMEGRVSGGQVRGTNNMRGYWERNIQIEQRQRA 188
>Z66513-8|CAA91340.2| 563|Caenorhabditis elegans Hypothetical
protein F54D5.15a protein.
Length = 563
Score = 25.4 bits (53), Expect = 9.2
Identities = 13/37 (35%), Positives = 19/37 (51%), Gaps = 1/37 (2%)
Frame = +3
Query: 198 WS-HSQDGRVRRLQ*SGSLRKTGYWLRTTEVRVRIRS 305
WS + +GRV Q G+ GYW R ++ R R+
Sbjct: 154 WSGRAMEGRVSGGQVRGTNNMRGYWERNIQIEQRQRA 190
Database: celegans
Posted date: Oct 23, 2007 1:18 PM
Number of letters in database: 12,740,198
Number of sequences in database: 27,780
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 7,746,485
Number of Sequences: 27780
Number of extensions: 152560
Number of successful extensions: 546
Number of sequences better than 10.0: 20
Number of HSP's better than 10.0 without gapping: 525
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 543
length of database: 12,740,198
effective HSP length: 71
effective length of database: 10,767,818
effective search space used: 376873630
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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