Samia BLAST Result against bee

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= S06A01NCLL0023_K06
         (164 letters)

Database: bee 
           438 sequences; 146,343 total letters

Searching......................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

AY336529-1|AAQ02340.1|  712|Apis mellifera transferrin protein.        23   0.45 
AY336528-1|AAQ02339.1|  712|Apis mellifera transferrin protein.        23   0.45 
AY217097-1|AAO39761.1|  712|Apis mellifera transferrin protein.        23   0.45 
AB264313-1|BAF43600.1|  900|Apis mellifera ecdysone-induced prot...    20   3.2  
DQ011226-1|AAY63895.1|  471|Apis mellifera Rh-like protein protein.    19   5.6  

>AY336529-1|AAQ02340.1|  712|Apis mellifera transferrin protein.
          Length = 712

 Score = 22.6 bits (46), Expect = 0.45
 Identities = 8/18 (44%), Positives = 12/18 (66%)
 Frame = +2

Query: 53  VATVDAAGRAFVECVKEV 106
           +A  D++GR F  CV E+
Sbjct: 24  IAAQDSSGRIFTICVPEI 41



 Score = 19.4 bits (38), Expect = 4.2
 Identities = 9/29 (31%), Positives = 15/29 (51%)
 Frame = +2

Query: 20  DQCKKYGAEDKVATVDAAGRAFVECVKEV 106
           D+ KK  A   +     +GR   EC+++V
Sbjct: 47  DEMKKDSAVKGIPVSCISGRDRYECIEKV 75


>AY336528-1|AAQ02339.1|  712|Apis mellifera transferrin protein.
          Length = 712

 Score = 22.6 bits (46), Expect = 0.45
 Identities = 8/18 (44%), Positives = 12/18 (66%)
 Frame = +2

Query: 53  VATVDAAGRAFVECVKEV 106
           +A  D++GR F  CV E+
Sbjct: 24  IAAQDSSGRIFTICVPEI 41



 Score = 19.4 bits (38), Expect = 4.2
 Identities = 9/29 (31%), Positives = 15/29 (51%)
 Frame = +2

Query: 20  DQCKKYGAEDKVATVDAAGRAFVECVKEV 106
           D+ KK  A   +     +GR   EC+++V
Sbjct: 47  DEMKKDSAVKGIPVSCISGRDRYECIEKV 75


>AY217097-1|AAO39761.1|  712|Apis mellifera transferrin protein.
          Length = 712

 Score = 22.6 bits (46), Expect = 0.45
 Identities = 8/18 (44%), Positives = 12/18 (66%)
 Frame = +2

Query: 53  VATVDAAGRAFVECVKEV 106
           +A  D++GR F  CV E+
Sbjct: 24  IAAQDSSGRIFTICVPEI 41



 Score = 19.4 bits (38), Expect = 4.2
 Identities = 9/29 (31%), Positives = 15/29 (51%)
 Frame = +2

Query: 20  DQCKKYGAEDKVATVDAAGRAFVECVKEV 106
           D+ KK  A   +     +GR   EC+++V
Sbjct: 47  DEMKKDSAVKGIPVSCISGRDRYECIEKV 75


>AB264313-1|BAF43600.1|  900|Apis mellifera ecdysone-induced protein
           75 protein.
          Length = 900

 Score = 19.8 bits (39), Expect = 3.2
 Identities = 8/10 (80%), Positives = 9/10 (90%)
 Frame = -3

Query: 78  RPAASTVATL 49
           RPA+ST ATL
Sbjct: 843 RPASSTAATL 852


>DQ011226-1|AAY63895.1|  471|Apis mellifera Rh-like protein protein.
          Length = 471

 Score = 19.0 bits (37), Expect = 5.6
 Identities = 9/19 (47%), Positives = 10/19 (52%)
 Frame = +2

Query: 32  KYGAEDKVATVDAAGRAFV 88
           KY  E  + TVDA    FV
Sbjct: 158 KYVGEHLLMTVDAGDSMFV 176


  Database: bee
    Posted date:  Oct 23, 2007  1:17 PM
  Number of letters in database: 146,343
  Number of sequences in database:  438
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 32,174
Number of Sequences: 438
Number of extensions: 433
Number of successful extensions: 8
Number of sequences better than 10.0: 5
Number of HSP's better than 10.0 without gapping: 5
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 8
length of database: 146,343
effective HSP length: 34
effective length of database: 131,451
effective search space used:  2629020
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 35 (18.9 bits)