Samia BLAST Result against bee

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= S06A01NCLL0023_K05
         (226 letters)

Database: bee 
           438 sequences; 146,343 total letters

Searching......................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

DQ232888-1|ABB36783.1|  499|Apis mellifera cytochrome P450 monoo...    19   5.7  
AJ780964-1|CAG62942.2|  332|Apis mellifera putative corticotropi...    19   5.7  
AB047034-1|BAB64310.1| 1598|Apis mellifera mblk-1 protein.             19   5.7  
AY500239-1|AAR92109.1|  555|Apis mellifera neuronal nicotinic ac...    19   9.9  

>DQ232888-1|ABB36783.1|  499|Apis mellifera cytochrome P450
           monooxygenase protein.
          Length = 499

 Score = 19.4 bits (38), Expect = 5.7
 Identities = 6/13 (46%), Positives = 10/13 (76%)
 Frame = -1

Query: 121 ILPEHTYASGFTR 83
           ++P+ T+A  FTR
Sbjct: 239 VMPDRTFAPFFTR 251


>AJ780964-1|CAG62942.2|  332|Apis mellifera putative corticotropin
           releasing hormone-binding protein protein.
          Length = 332

 Score = 19.4 bits (38), Expect = 5.7
 Identities = 9/21 (42%), Positives = 12/21 (57%)
 Frame = +2

Query: 41  PTPKIGLSFR*RKISCETRGI 103
           P  KI ++F    I CE RG+
Sbjct: 100 PDQKIEINFITFDIPCEHRGL 120


>AB047034-1|BAB64310.1| 1598|Apis mellifera mblk-1 protein.
          Length = 1598

 Score = 19.4 bits (38), Expect = 5.7
 Identities = 6/11 (54%), Positives = 9/11 (81%)
 Frame = -2

Query: 114  RNTPMPRVSHD 82
            R TP+PR++ D
Sbjct: 1337 RRTPVPRLAQD 1347


>AY500239-1|AAR92109.1|  555|Apis mellifera neuronal nicotinic
           acetylcholine receptoralpha7-1 protein.
          Length = 555

 Score = 18.6 bits (36), Expect = 9.9
 Identities = 5/6 (83%), Positives = 5/6 (83%)
 Frame = +1

Query: 154 PGPHRH 171
           PGPH H
Sbjct: 412 PGPHHH 417


  Database: bee
    Posted date:  Oct 23, 2007  1:17 PM
  Number of letters in database: 146,343
  Number of sequences in database:  438
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 66,985
Number of Sequences: 438
Number of extensions: 1278
Number of successful extensions: 4
Number of sequences better than 10.0: 4
Number of HSP's better than 10.0 without gapping: 4
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 4
length of database: 146,343
effective HSP length: 46
effective length of database: 126,195
effective search space used:  3533460
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 36 (19.4 bits)