Samia BLAST Result against bee

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= S06A01NCLL0023_K04
         (200 letters)

Database: bee 
           438 sequences; 146,343 total letters

Searching......................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

AF159569-1|AAF70859.1| 1124|Apis mellifera period clock protein ...    21   1.4  
AY921579-1|AAX14899.1|  996|Apis mellifera ephrin receptor protein.    20   2.4  
AB204558-1|BAD89803.1| 1143|Apis mellifera nitric oxide synthase...    20   2.4  
DQ232888-1|ABB36783.1|  499|Apis mellifera cytochrome P450 monoo...    19   4.3  
AB253416-1|BAE86927.1|  580|Apis mellifera alpha-glucosidase pro...    19   4.3  
EF625898-1|ABR45905.1|  686|Apis mellifera hexamerin protein.          19   5.6  
EF589162-1|ABQ84439.1|  686|Apis mellifera hexamerin 70c protein.      19   5.6  
DQ026037-1|AAY87896.1|  431|Apis mellifera nicotinic acetylcholi...    19   7.4  
DQ011227-1|AAY63896.1|  484|Apis mellifera Amt-1-like protein pr...    19   7.4  
AB270697-1|BAF75928.1|  735|Apis mellifera FoxP protein protein.       19   7.4  
AY937243-1|AAX33677.1| 1370|Apis mellifera Toll-like receptor pr...    18   9.8  

>AF159569-1|AAF70859.1| 1124|Apis mellifera period clock protein
           protein.
          Length = 1124

 Score = 21.0 bits (42), Expect = 1.4
 Identities = 8/18 (44%), Positives = 10/18 (55%)
 Frame = +1

Query: 142 SFSELNRNKETNKCTDKK 195
           S S  N     NKC+D+K
Sbjct: 868 SISHENNQPTMNKCSDRK 885


>AY921579-1|AAX14899.1|  996|Apis mellifera ephrin receptor protein.
          Length = 996

 Score = 20.2 bits (40), Expect = 2.4
 Identities = 13/42 (30%), Positives = 21/42 (50%)
 Frame = -1

Query: 173  VSLFRLSSENDWPILMEFH**VEGFL*SNIGYFEAINYVTVR 48
            V L +L+S ++W   ++     E F  S +   EA   VTV+
Sbjct: 919  VDLTQLTSVSEWLASIKMSRYAESFERSGVTTLEAAARVTVQ 960


>AB204558-1|BAD89803.1| 1143|Apis mellifera nitric oxide synthase
            protein.
          Length = 1143

 Score = 20.2 bits (40), Expect = 2.4
 Identities = 9/20 (45%), Positives = 12/20 (60%)
 Frame = +3

Query: 141  IIFGA*PEQRNKQMYRQENK 200
            + FG    QRN  +YRQE +
Sbjct: 1004 LFFGC--RQRNLDLYRQEKE 1021


>DQ232888-1|ABB36783.1|  499|Apis mellifera cytochrome P450
           monooxygenase protein.
          Length = 499

 Score = 19.4 bits (38), Expect = 4.3
 Identities = 8/23 (34%), Positives = 14/23 (60%)
 Frame = +3

Query: 48  SYGYVIDGFEVAYVTL*KALYLL 116
           ++ + + GFE +  T+  ALY L
Sbjct: 298 AFVFFLAGFETSSTTMSNALYEL 320


>AB253416-1|BAE86927.1|  580|Apis mellifera alpha-glucosidase
           protein.
          Length = 580

 Score = 19.4 bits (38), Expect = 4.3
 Identities = 7/14 (50%), Positives = 9/14 (64%)
 Frame = +2

Query: 80  SLCYFIKSPLLTNG 121
           SL Y  K P++ NG
Sbjct: 471 SLSYLKKQPVIANG 484


>EF625898-1|ABR45905.1|  686|Apis mellifera hexamerin protein.
          Length = 686

 Score = 19.0 bits (37), Expect = 5.6
 Identities = 11/32 (34%), Positives = 15/32 (46%), Gaps = 1/32 (3%)
 Frame = +2

Query: 92  FIKSPLLTNGIPLKSANHFRSLTGTK-KQTNV 184
           F  + + +NG+     N F SL   K K  NV
Sbjct: 297 FYSTIMYSNGVTFPQRNRFSSLPYYKYKYLNV 328


>EF589162-1|ABQ84439.1|  686|Apis mellifera hexamerin 70c protein.
          Length = 686

 Score = 19.0 bits (37), Expect = 5.6
 Identities = 11/32 (34%), Positives = 15/32 (46%), Gaps = 1/32 (3%)
 Frame = +2

Query: 92  FIKSPLLTNGIPLKSANHFRSLTGTK-KQTNV 184
           F  + + +NG+     N F SL   K K  NV
Sbjct: 297 FYSTIMYSNGVTFPQRNRFSSLPYYKYKYLNV 328


>DQ026037-1|AAY87896.1|  431|Apis mellifera nicotinic acetylcholine
           receptor alpha9subunit protein.
          Length = 431

 Score = 18.6 bits (36), Expect = 7.4
 Identities = 6/15 (40%), Positives = 9/15 (60%)
 Frame = -1

Query: 161 RLSSENDWPILMEFH 117
           +L   +DW  +ME H
Sbjct: 78  KLMEFDDWTSVMELH 92


>DQ011227-1|AAY63896.1|  484|Apis mellifera Amt-1-like protein
           protein.
          Length = 484

 Score = 18.6 bits (36), Expect = 7.4
 Identities = 5/14 (35%), Positives = 10/14 (71%)
 Frame = +1

Query: 16  NFEKSCLLTYVRTV 57
           NF+  CL +++ T+
Sbjct: 144 NFKAYCLFSFLNTI 157


>AB270697-1|BAF75928.1|  735|Apis mellifera FoxP protein protein.
          Length = 735

 Score = 18.6 bits (36), Expect = 7.4
 Identities = 4/9 (44%), Positives = 7/9 (77%)
 Frame = +2

Query: 68  WLRSSLCYF 94
           W +++ CYF
Sbjct: 533 WFQNTFCYF 541


>AY937243-1|AAX33677.1| 1370|Apis mellifera Toll-like receptor
           protein.
          Length = 1370

 Score = 18.2 bits (35), Expect = 9.8
 Identities = 8/27 (29%), Positives = 16/27 (59%)
 Frame = -3

Query: 132 FNGIPLVSRGLFIK*HRLLRSHQLRNR 52
           +NG+  + +G+F +  +LL  +   NR
Sbjct: 294 YNGLRDLPKGIFTRLEQLLVLNLAGNR 320


  Database: bee
    Posted date:  Oct 23, 2007  1:17 PM
  Number of letters in database: 146,343
  Number of sequences in database:  438
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 49,904
Number of Sequences: 438
Number of extensions: 785
Number of successful extensions: 11
Number of sequences better than 10.0: 11
Number of HSP's better than 10.0 without gapping: 11
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 11
length of database: 146,343
effective HSP length: 45
effective length of database: 126,633
effective search space used:  2659293
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 35 (18.9 bits)