Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= S06A01NCLL0023_K02
(312 letters)
Database: uniref50
1,657,284 sequences; 575,637,011 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
UniRef50_P08865 Cluster: 40S ribosomal protein SA; n=242; Eukary... 121 3e-27
UniRef50_Q4KTE2 Cluster: SA; n=2; Fungi/Metazoa group|Rep: SA - ... 113 5e-25
UniRef50_Q9XZ65 Cluster: Laminin receptor-like protein/ p40 ribo... 108 2e-23
UniRef50_Q08682 Cluster: 40S ribosomal protein Sa-1; n=19; Magno... 105 3e-22
UniRef50_UPI0000E20E16 Cluster: PREDICTED: similar to 33 kDa pro... 103 6e-22
UniRef50_Q9Y7L8 Cluster: 40S ribosomal protein S0-A; n=11; Ascom... 102 1e-21
UniRef50_P32905 Cluster: 40S ribosomal protein S0-A; n=23; Fungi... 101 3e-21
UniRef50_Q4N1J1 Cluster: 40S ribosomal protein SA, putative; n=1... 101 4e-21
UniRef50_A2FLG0 Cluster: Ribosomal protein, putative; n=7; Trich... 100 5e-21
UniRef50_Q0DUK0 Cluster: Os03g0182600 protein; n=1; Oryza sativa... 97 5e-20
UniRef50_Q7QWF5 Cluster: GLP_336_16528_17265; n=1; Giardia lambl... 97 9e-20
UniRef50_Q01CH5 Cluster: B1056G08.113 gene product; n=6; Eukaryo... 95 2e-19
UniRef50_A0ECJ9 Cluster: Chromosome undetermined scaffold_9, who... 90 8e-18
UniRef50_P46770 Cluster: 40S ribosomal protein SA; n=1; Echinoco... 83 1e-15
UniRef50_A7NTT5 Cluster: Chromosome chr18 scaffold_1, whole geno... 78 3e-14
UniRef50_Q9AW71 Cluster: 40S ribosomal protein SSA; n=1; Guillar... 71 4e-12
UniRef50_UPI0000E48DD5 Cluster: PREDICTED: similar to 34/67 kD l... 71 5e-12
UniRef50_Q862Y3 Cluster: Similar to C10 protein; n=3; Eutheria|R... 70 9e-12
UniRef50_Q4GXR5 Cluster: Ribosomal protein SAe; n=2; Adephaga|Re... 68 5e-11
UniRef50_Q9U5P8 Cluster: Putative uncharacterized protein; n=1; ... 66 2e-10
UniRef50_A1RWV4 Cluster: Ribosomal protein S2; n=2; Archaea|Rep:... 66 2e-10
UniRef50_A3H8R8 Cluster: Ribosomal protein S2; n=1; Caldivirga m... 64 4e-10
UniRef50_Q74M65 Cluster: NEQ508; n=1; Nanoarchaeum equitans|Rep:... 63 1e-09
UniRef50_P57712 Cluster: 30S ribosomal protein S2P; n=2; Thermop... 63 1e-09
UniRef50_P95993 Cluster: 30S ribosomal protein S2P; n=13; Archae... 58 4e-08
UniRef50_Q8JIE5 Cluster: 67kD laminin receptor/ribosomal protein... 57 7e-08
UniRef50_P54109 Cluster: 30S ribosomal protein S2P; n=10; Euryar... 57 7e-08
UniRef50_UPI0000EB1146 Cluster: UPI0000EB1146 related cluster; n... 54 5e-07
UniRef50_Q8TT39 Cluster: 30S ribosomal protein S2P; n=10; Euryar... 53 1e-06
UniRef50_A0RY14 Cluster: Ribosomal protein S2; n=2; Thermoprotei... 52 3e-06
UniRef50_P29202 Cluster: 30S ribosomal protein S2P; n=12; Euryar... 49 2e-05
UniRef50_Q3LVY7 Cluster: Ribosomal RNA S0; n=1; Bigelowiella nat... 48 4e-05
UniRef50_UPI0000EB0B97 Cluster: UPI0000EB0B97 related cluster; n... 46 1e-04
UniRef50_Q8SS60 Cluster: 40S RIBOSOMAL PROTEIN SA or P40; n=1; E... 46 2e-04
UniRef50_Q4P1B8 Cluster: Putative uncharacterized protein; n=1; ... 45 3e-04
UniRef50_Q9PRB9 Cluster: 30S ribosomal protein S2; n=1; Ureaplas... 42 0.003
UniRef50_Q8EUG1 Cluster: Ribosomal protein S2; n=1; Mycoplasma p... 40 0.014
UniRef50_Q7NAW2 Cluster: RpsB; n=1; Mycoplasma gallisepticum|Rep... 38 0.044
UniRef50_P75560 Cluster: 30S ribosomal protein S2; n=4; Mycoplas... 38 0.058
UniRef50_A3AIV8 Cluster: Putative uncharacterized protein; n=1; ... 36 0.23
UniRef50_Q5A8K1 Cluster: Likely mitochondrial ribosomal protein;... 35 0.31
UniRef50_Q6MGY6 Cluster: 30S ribosomal protein S2; n=3; Deltapro... 33 1.2
UniRef50_Q6E782 Cluster: Ribosomal protein S2; n=4; Oomycetes|Re... 33 1.2
UniRef50_Q6BNP9 Cluster: Debaryomyces hansenii chromosome E of s... 33 1.2
UniRef50_Q98Q36 Cluster: 30S ribosomal protein S2; n=2; Mycoplas... 33 1.2
UniRef50_Q6F0Q4 Cluster: 30S ribosomal protein S2; n=4; Mollicut... 33 1.6
UniRef50_P19679 Cluster: 30S ribosomal protein S2; n=3; Firmicut... 32 2.9
UniRef50_Q9RU79 Cluster: 30S ribosomal protein S2; n=7; Bacteria... 32 2.9
UniRef50_Q8EEV7 Cluster: Putative uncharacterized protein; n=12;... 31 3.8
UniRef50_Q7NJK2 Cluster: 30S ribosomal protein S2; n=154; cellul... 31 3.8
UniRef50_Q9VDY5 Cluster: CG5237-PA; n=2; Sophophora|Rep: CG5237-... 31 5.0
UniRef50_A3RYH1 Cluster: C4-dicarboxylate-binding protein; n=3; ... 31 6.6
UniRef50_A7AMH6 Cluster: Putative uncharacterized protein; n=1; ... 31 6.6
UniRef50_UPI000049963A Cluster: AAA family ATPase; n=1; Entamoeb... 30 8.7
UniRef50_Q9J8A5 Cluster: ORF30; n=1; Spodoptera exigua MNPV|Rep:... 30 8.7
UniRef50_A6EB55 Cluster: 30S ribosomal subunit protein S2; n=3; ... 30 8.7
UniRef50_P32902 Cluster: 37S ribosomal protein MRP4, mitochondri... 30 8.7
>UniRef50_P08865 Cluster: 40S ribosomal protein SA; n=242;
Eukaryota|Rep: 40S ribosomal protein SA - Homo sapiens
(Human)
Length = 295
Score = 121 bits (292), Expect = 3e-27
Identities = 49/67 (73%), Positives = 60/67 (89%)
Frame = +3
Query: 9 VNIPVIALCNTDSPLRFVDIAIPCNTKSSHSIGLMWWLLAREVLRLRGVLSRDQRWDVVV 188
VN+P IALCNTDSPLR+VDIAIPCN K +HS+GLMWW+LAREVLR+RG +SR+ W+V+
Sbjct: 140 VNLPTIALCNTDSPLRYVDIAIPCNNKGAHSVGLMWWMLAREVLRMRGTISREHPWEVMP 199
Query: 189 DLFFYRD 209
DL+FYRD
Sbjct: 200 DLYFYRD 206
>UniRef50_Q4KTE2 Cluster: SA; n=2; Fungi/Metazoa group|Rep: SA -
Suberites domuncula (Sponge)
Length = 325
Score = 113 bits (273), Expect = 5e-25
Identities = 47/67 (70%), Positives = 57/67 (85%)
Frame = +3
Query: 9 VNIPVIALCNTDSPLRFVDIAIPCNTKSSHSIGLMWWLLAREVLRLRGVLSRDQRWDVVV 188
VNIPVIA CNT+SPLR++D+AIPCN +S+GLMWWLL REVLRLRG +SR+ W+V+
Sbjct: 140 VNIPVIAFCNTNSPLRYIDVAIPCNNMGKNSLGLMWWLLCREVLRLRGTISRELPWEVMP 199
Query: 189 DLFFYRD 209
DLFFYRD
Sbjct: 200 DLFFYRD 206
>UniRef50_Q9XZ65 Cluster: Laminin receptor-like protein/ p40
ribosome associated-like protein; n=7; Trypanosoma|Rep:
Laminin receptor-like protein/ p40 ribosome
associated-like protein - Trypanosoma cruzi
Length = 298
Score = 108 bits (260), Expect = 2e-23
Identities = 48/67 (71%), Positives = 55/67 (82%)
Frame = +3
Query: 9 VNIPVIALCNTDSPLRFVDIAIPCNTKSSHSIGLMWWLLAREVLRLRGVLSRDQRWDVVV 188
VNIPVIA C+TD+PL FVDIAIPCN + +SI +M+WLLAREVLRLRG + R WDV V
Sbjct: 160 VNIPVIAFCDTDAPLEFVDIAIPCNDRRRYSISMMYWLLAREVLRLRGTIPRSVPWDVKV 219
Query: 189 DLFFYRD 209
DLFFYRD
Sbjct: 220 DLFFYRD 226
>UniRef50_Q08682 Cluster: 40S ribosomal protein Sa-1; n=19;
Magnoliophyta|Rep: 40S ribosomal protein Sa-1 -
Arabidopsis thaliana (Mouse-ear cress)
Length = 298
Score = 105 bits (251), Expect = 3e-22
Identities = 43/66 (65%), Positives = 55/66 (83%)
Frame = +3
Query: 12 NIPVIALCNTDSPLRFVDIAIPCNTKSSHSIGLMWWLLAREVLRLRGVLSRDQRWDVVVD 191
NIP+IA C+TDSP+RFVDI IP N K HSIG ++WLLAR VL++RG ++ Q+WDV+VD
Sbjct: 145 NIPIIAFCDTDSPMRFVDIGIPANNKGKHSIGCLFWLLARMVLQMRGTIAAGQKWDVMVD 204
Query: 192 LFFYRD 209
LFFYR+
Sbjct: 205 LFFYRE 210
>UniRef50_UPI0000E20E16 Cluster: PREDICTED: similar to 33 kDa
protein; n=4; Eutheria|Rep: PREDICTED: similar to 33 kDa
protein - Pan troglodytes
Length = 355
Score = 103 bits (248), Expect = 6e-22
Identities = 42/67 (62%), Positives = 53/67 (79%)
Frame = +3
Query: 9 VNIPVIALCNTDSPLRFVDIAIPCNTKSSHSIGLMWWLLAREVLRLRGVLSRDQRWDVVV 188
VN+P IALCNTDSPL +VDIAIPCN K +HS+G+MWW+L EV R+ G +SR+ W+V+
Sbjct: 220 VNLPTIALCNTDSPLCYVDIAIPCNNKGAHSVGVMWWMLVPEVRRISGTISREHPWEVMT 279
Query: 189 DLFFYRD 209
D FYRD
Sbjct: 280 DPCFYRD 286
>UniRef50_Q9Y7L8 Cluster: 40S ribosomal protein S0-A; n=11;
Ascomycota|Rep: 40S ribosomal protein S0-A -
Schizosaccharomyces pombe (Fission yeast)
Length = 292
Score = 102 bits (245), Expect = 1e-21
Identities = 48/67 (71%), Positives = 54/67 (80%)
Frame = +3
Query: 9 VNIPVIALCNTDSPLRFVDIAIPCNTKSSHSIGLMWWLLAREVLRLRGVLSRDQRWDVVV 188
VNIPVIALC+TDS L VDIAIP N K SIGL+W+LLAREVLR+RG LSR WDV+
Sbjct: 142 VNIPVIALCDTDSILNHVDIAIPTNNKGRKSIGLIWYLLAREVLRVRGTLSRSAPWDVMP 201
Query: 189 DLFFYRD 209
DL+FYRD
Sbjct: 202 DLYFYRD 208
>UniRef50_P32905 Cluster: 40S ribosomal protein S0-A; n=23;
Fungi/Metazoa group|Rep: 40S ribosomal protein S0-A -
Saccharomyces cerevisiae (Baker's yeast)
Length = 252
Score = 101 bits (242), Expect = 3e-21
Identities = 46/68 (67%), Positives = 54/68 (79%), Gaps = 1/68 (1%)
Frame = +3
Query: 9 VNIPVIALCNTDSPLRFVDIAIPCNTKSSHSIGLMWWLLAREVLRLRGVL-SRDQRWDVV 185
VNIPVIAL + DSP FVD+AIPCN + HSIGL+W+LLAREVLRLRG L R Q W ++
Sbjct: 139 VNIPVIALTDLDSPSEFVDVAIPCNNRGKHSIGLIWYLLAREVLRLRGALVDRTQPWSIM 198
Query: 186 VDLFFYRD 209
DL+FYRD
Sbjct: 199 PDLYFYRD 206
>UniRef50_Q4N1J1 Cluster: 40S ribosomal protein SA, putative; n=11;
Apicomplexa|Rep: 40S ribosomal protein SA, putative -
Theileria parva
Length = 274
Score = 101 bits (241), Expect = 4e-21
Identities = 46/67 (68%), Positives = 53/67 (79%)
Frame = +3
Query: 9 VNIPVIALCNTDSPLRFVDIAIPCNTKSSHSIGLMWWLLAREVLRLRGVLSRDQRWDVVV 188
V++PVIALC+TDSPL +VDIAIPCN K SI LM+WLLAREVL LR L R WDV+V
Sbjct: 140 VSLPVIALCDTDSPLNYVDIAIPCNNKGKESIALMYWLLAREVLYLRDQLKRWMPWDVLV 199
Query: 189 DLFFYRD 209
D FF+RD
Sbjct: 200 DTFFWRD 206
>UniRef50_A2FLG0 Cluster: Ribosomal protein, putative; n=7;
Trichomonas vaginalis G3|Rep: Ribosomal protein,
putative - Trichomonas vaginalis G3
Length = 256
Score = 100 bits (240), Expect = 5e-21
Identities = 44/66 (66%), Positives = 53/66 (80%)
Frame = +3
Query: 12 NIPVIALCNTDSPLRFVDIAIPCNTKSSHSIGLMWWLLAREVLRLRGVLSRDQRWDVVVD 191
NIP IALC+TD+ L +VD IPCNTK+ +S+GL+ WLL REVLRLRG L+R Q W V+ D
Sbjct: 139 NIPCIALCDTDAHLDYVDCVIPCNTKNKNSMGLVMWLLTREVLRLRGALTRTQEWSVLPD 198
Query: 192 LFFYRD 209
LFFYRD
Sbjct: 199 LFFYRD 204
>UniRef50_Q0DUK0 Cluster: Os03g0182600 protein; n=1; Oryza sativa
(japonica cultivar-group)|Rep: Os03g0182600 protein -
Oryza sativa subsp. japonica (Rice)
Length = 223
Score = 97.5 bits (232), Expect = 5e-20
Identities = 41/66 (62%), Positives = 52/66 (78%)
Frame = +3
Query: 12 NIPVIALCNTDSPLRFVDIAIPCNTKSSHSIGLMWWLLAREVLRLRGVLSRDQRWDVVVD 191
NIP IA C+TDSP+R+VDI IP N K +SIG ++WLLAR VL++RG + +WDV+VD
Sbjct: 63 NIPTIAFCDTDSPMRYVDIGIPANNKGRNSIGCLFWLLARMVLQMRGTILPGHKWDVMVD 122
Query: 192 LFFYRD 209
LFFYRD
Sbjct: 123 LFFYRD 128
>UniRef50_Q7QWF5 Cluster: GLP_336_16528_17265; n=1; Giardia lamblia
ATCC 50803|Rep: GLP_336_16528_17265 - Giardia lamblia
ATCC 50803
Length = 245
Score = 96.7 bits (230), Expect = 9e-20
Identities = 41/63 (65%), Positives = 53/63 (84%)
Frame = +3
Query: 9 VNIPVIALCNTDSPLRFVDIAIPCNTKSSHSIGLMWWLLAREVLRLRGVLSRDQRWDVVV 188
VNIP I+LCN+D+ L+F+D+AIPCN K+ SIGL++WLLAREVLRL+G +SR + WDV
Sbjct: 145 VNIPTISLCNSDANLKFIDVAIPCNNKTPMSIGLIYWLLAREVLRLKGSISRTEEWDVKP 204
Query: 189 DLF 197
DLF
Sbjct: 205 DLF 207
>UniRef50_Q01CH5 Cluster: B1056G08.113 gene product; n=6;
Eukaryota|Rep: B1056G08.113 gene product - Ostreococcus
tauri
Length = 313
Score = 95.5 bits (227), Expect = 2e-19
Identities = 43/67 (64%), Positives = 53/67 (79%)
Frame = +3
Query: 9 VNIPVIALCNTDSPLRFVDIAIPCNTKSSHSIGLMWWLLAREVLRLRGVLSRDQRWDVVV 188
VNIP IA C+TDSPL+ VDIAIP N K+ SIG +++LLAR VL++RG +S WDV+V
Sbjct: 163 VNIPTIAFCDTDSPLKNVDIAIPANNKAKQSIGCLYYLLARMVLQMRGTISPANPWDVMV 222
Query: 189 DLFFYRD 209
DLFFYRD
Sbjct: 223 DLFFYRD 229
>UniRef50_A0ECJ9 Cluster: Chromosome undetermined scaffold_9, whole
genome shotgun sequence; n=4; Oligohymenophorea|Rep:
Chromosome undetermined scaffold_9, whole genome shotgun
sequence - Paramecium tetraurelia
Length = 268
Score = 90.2 bits (214), Expect = 8e-18
Identities = 38/67 (56%), Positives = 55/67 (82%)
Frame = +3
Query: 9 VNIPVIALCNTDSPLRFVDIAIPCNTKSSHSIGLMWWLLAREVLRLRGVLSRDQRWDVVV 188
VNIPVIAL N+D+PL++VDI IP + + SI +++WLLAREV LRG L++D+ WDV+V
Sbjct: 169 VNIPVIALTNSDTPLQYVDIPIPVGNRETKSISMIYWLLAREVKILRGELNKDEEWDVLV 228
Query: 189 DLFFYRD 209
DLF++++
Sbjct: 229 DLFYHKE 235
>UniRef50_P46770 Cluster: 40S ribosomal protein SA; n=1;
Echinococcus granulosus|Rep: 40S ribosomal protein SA -
Echinococcus granulosus
Length = 268
Score = 83.0 bits (196), Expect = 1e-15
Identities = 40/67 (59%), Positives = 48/67 (71%)
Frame = +3
Query: 9 VNIPVIALCNTDSPLRFVDIAIPCNTKSSHSIGLMWWLLAREVLRLRGVLSRDQRWDVVV 188
VNIPVI CNTDSPL+ VDI IPCN +SI LM W+LAREV R+ G+ R Q DV++
Sbjct: 140 VNIPVIGFCNTDSPLQCVDIGIPCN-NDKYSIALMLWMLAREVRRIWGLDPRSQPGDVIM 198
Query: 189 DLFFYRD 209
DLF R+
Sbjct: 199 DLFLMRE 205
>UniRef50_A7NTT5 Cluster: Chromosome chr18 scaffold_1, whole genome
shotgun sequence; n=1; Vitis vinifera|Rep: Chromosome
chr18 scaffold_1, whole genome shotgun sequence - Vitis
vinifera (Grape)
Length = 201
Score = 78.2 bits (184), Expect = 3e-14
Identities = 33/63 (52%), Positives = 44/63 (69%)
Frame = +3
Query: 12 NIPVIALCNTDSPLRFVDIAIPCNTKSSHSIGLMWWLLAREVLRLRGVLSRDQRWDVVVD 191
NIP IA C+ DSP+R+VDI I N K H+IG ++WLL VL +R ++ +WDV+VD
Sbjct: 92 NIPTIAFCDIDSPMRYVDIDILTNNKGKHNIGCLFWLLTMMVLHMRHTIALGHKWDVMVD 151
Query: 192 LFF 200
LFF
Sbjct: 152 LFF 154
>UniRef50_Q9AW71 Cluster: 40S ribosomal protein SSA; n=1; Guillardia
theta|Rep: 40S ribosomal protein SSA - Guillardia theta
(Cryptomonas phi)
Length = 199
Score = 71.3 bits (167), Expect = 4e-12
Identities = 31/63 (49%), Positives = 46/63 (73%)
Frame = +3
Query: 9 VNIPVIALCNTDSPLRFVDIAIPCNTKSSHSIGLMWWLLAREVLRLRGVLSRDQRWDVVV 188
VNIPVI++CNTDS L ++DIAIP N K +S L+ WLL +++L +G L+++ W+V V
Sbjct: 133 VNIPVISVCNTDSFLSYIDIAIPGNNKDRYSFALIIWLLTKKILIFKGELTKNCEWNVSV 192
Query: 189 DLF 197
+ F
Sbjct: 193 ESF 195
>UniRef50_UPI0000E48DD5 Cluster: PREDICTED: similar to 34/67 kD
laminin binding protein; n=1; Strongylocentrotus
purpuratus|Rep: PREDICTED: similar to 34/67 kD laminin
binding protein - Strongylocentrotus purpuratus
Length = 220
Score = 70.9 bits (166), Expect = 5e-12
Identities = 27/38 (71%), Positives = 35/38 (92%)
Frame = +3
Query: 96 HSIGLMWWLLAREVLRLRGVLSRDQRWDVVVDLFFYRD 209
HSIGLMWW+L+REVLRLRG +SRD W+++VDL+F+RD
Sbjct: 48 HSIGLMWWMLSREVLRLRGAISRDVTWEIMVDLYFFRD 85
>UniRef50_Q862Y3 Cluster: Similar to C10 protein; n=3; Eutheria|Rep:
Similar to C10 protein - Bos taurus (Bovine)
Length = 130
Score = 70.1 bits (164), Expect = 9e-12
Identities = 26/41 (63%), Positives = 36/41 (87%)
Frame = +3
Query: 87 KSSHSIGLMWWLLAREVLRLRGVLSRDQRWDVVVDLFFYRD 209
K +HS+GL+WW+LAREVLR+RG +SR+ W+V+ DL+FYRD
Sbjct: 1 KGAHSVGLIWWMLAREVLRMRGTISREHPWEVMPDLYFYRD 41
>UniRef50_Q4GXR5 Cluster: Ribosomal protein SAe; n=2; Adephaga|Rep:
Ribosomal protein SAe - Meladema coriacea
Length = 112
Score = 67.7 bits (158), Expect = 5e-11
Identities = 27/35 (77%), Positives = 33/35 (94%)
Frame = +3
Query: 105 GLMWWLLAREVLRLRGVLSRDQRWDVVVDLFFYRD 209
GL+WWLLAREVLRLRG++ R+ +W+VVVDLFFYRD
Sbjct: 1 GLVWWLLAREVLRLRGLIPRETKWEVVVDLFFYRD 35
>UniRef50_Q9U5P8 Cluster: Putative uncharacterized protein; n=1;
Entodinium caudatum|Rep: Putative uncharacterized
protein - Entodinium caudatum
Length = 163
Score = 65.7 bits (153), Expect = 2e-10
Identities = 24/47 (51%), Positives = 40/47 (85%)
Frame = +3
Query: 9 VNIPVIALCNTDSPLRFVDIAIPCNTKSSHSIGLMWWLLAREVLRLR 149
VN+PVIA+CN+D+ L++VD AIPCN ++++SI ++W+LL + VL ++
Sbjct: 44 VNLPVIAICNSDNMLKYVDCAIPCNNRNNYSIAMIWYLLTKAVLEIK 90
>UniRef50_A1RWV4 Cluster: Ribosomal protein S2; n=2; Archaea|Rep:
Ribosomal protein S2 - Thermofilum pendens (strain Hrk
5)
Length = 214
Score = 65.7 bits (153), Expect = 2e-10
Identities = 28/48 (58%), Positives = 38/48 (79%)
Frame = +3
Query: 9 VNIPVIALCNTDSPLRFVDIAIPCNTKSSHSIGLMWWLLAREVLRLRG 152
+ IPVIALC+TDSP+ VD+ IP N + ++ L++WLLAREVLR+RG
Sbjct: 141 MGIPVIALCDTDSPISNVDLIIPTNNRGRKALALIFWLLAREVLRIRG 188
>UniRef50_A3H8R8 Cluster: Ribosomal protein S2; n=1; Caldivirga
maquilingensis IC-167|Rep: Ribosomal protein S2 -
Caldivirga maquilingensis IC-167
Length = 215
Score = 64.5 bits (150), Expect = 4e-10
Identities = 29/52 (55%), Positives = 39/52 (75%)
Frame = +3
Query: 15 IPVIALCNTDSPLRFVDIAIPCNTKSSHSIGLMWWLLAREVLRLRGVLSRDQ 170
IPVIAL +TDS F+D+ IPCN K +S+ L++WLLAR+VLR RG L ++
Sbjct: 146 IPVIALVDTDSDPTFIDLMIPCNNKGRNSLALVFWLLARQVLRERGELKPNE 197
>UniRef50_Q74M65 Cluster: NEQ508; n=1; Nanoarchaeum equitans|Rep:
NEQ508 - Nanoarchaeum equitans
Length = 201
Score = 63.3 bits (147), Expect = 1e-09
Identities = 26/61 (42%), Positives = 42/61 (68%)
Frame = +3
Query: 15 IPVIALCNTDSPLRFVDIAIPCNTKSSHSIGLMWWLLAREVLRLRGVLSRDQRWDVVVDL 194
I ++ALC+T+ ++D IP N + S S+ L++W+LARE LR RGV+ +D++ V V+
Sbjct: 133 ITILALCDTNHTKNYIDFCIPANNRGSKSLALIYWILAREYLRNRGVIGKDEQLKVPVEE 192
Query: 195 F 197
F
Sbjct: 193 F 193
>UniRef50_P57712 Cluster: 30S ribosomal protein S2P; n=2;
Thermoplasma|Rep: 30S ribosomal protein S2P -
Thermoplasma acidophilum
Length = 199
Score = 62.9 bits (146), Expect = 1e-09
Identities = 25/64 (39%), Positives = 43/64 (67%)
Frame = +3
Query: 6 RVNIPVIALCNTDSPLRFVDIAIPCNTKSSHSIGLMWWLLAREVLRLRGVLSRDQRWDVV 185
++ IP+IALC+ ++ FVD+ IP N K S+ +++WLLARE+L+ RG ++ ++
Sbjct: 132 KIGIPIIALCDANNKTDFVDLIIPTNNKGRRSLAVIYWLLAREILKNRGTITSYDQFKYT 191
Query: 186 VDLF 197
+D F
Sbjct: 192 IDDF 195
>UniRef50_P95993 Cluster: 30S ribosomal protein S2P; n=13;
Archaea|Rep: 30S ribosomal protein S2P - Sulfolobus
solfataricus
Length = 231
Score = 58.0 bits (134), Expect = 4e-08
Identities = 26/67 (38%), Positives = 41/67 (61%)
Frame = +3
Query: 6 RVNIPVIALCNTDSPLRFVDIAIPCNTKSSHSIGLMWWLLAREVLRLRGVLSRDQRWDVV 185
+V IP++A +TD+ + ++D+ IP N K S+ L++W LAR++LR R V+ D V
Sbjct: 162 KVGIPIVAFADTDAKIDYIDLIIPANNKGRKSLALLYWALARQILRERRVIPPDGDLAVP 221
Query: 186 VDLFFYR 206
V F R
Sbjct: 222 VSEFEMR 228
>UniRef50_Q8JIE5 Cluster: 67kD laminin receptor/ribosomal protein;
n=3; Euteleostomi|Rep: 67kD laminin receptor/ribosomal
protein - Agalychnis callidryas (Red-eyed leaf frog)
Length = 140
Score = 57.2 bits (132), Expect = 7e-08
Identities = 21/32 (65%), Positives = 28/32 (87%)
Frame = +3
Query: 114 WWLLAREVLRLRGVLSRDQRWDVVVDLFFYRD 209
WW+LAREVLR+RG +SR+ W+V+ DL+FYRD
Sbjct: 1 WWMLAREVLRMRGTISREHPWEVMPDLYFYRD 32
>UniRef50_P54109 Cluster: 30S ribosomal protein S2P; n=10;
Euryarchaeota|Rep: 30S ribosomal protein S2P -
Methanococcus jannaschii
Length = 222
Score = 57.2 bits (132), Expect = 7e-08
Identities = 21/57 (36%), Positives = 38/57 (66%)
Frame = +3
Query: 3 TRVNIPVIALCNTDSPLRFVDIAIPCNTKSSHSIGLMWWLLAREVLRLRGVLSRDQR 173
T + +P++ LC+T+ F+D+ IP N K ++ L+++LL RE L+ RGV++ D +
Sbjct: 132 TEIGVPIVGLCDTEHLTSFIDLVIPTNNKGKKAVALIYYLLTREYLKNRGVITDDTK 188
>UniRef50_UPI0000EB1146 Cluster: UPI0000EB1146 related cluster; n=1;
Canis lupus familiaris|Rep: UPI0000EB1146 UniRef100
entry - Canis familiaris
Length = 222
Score = 54.4 bits (125), Expect = 5e-07
Identities = 31/67 (46%), Positives = 40/67 (59%)
Frame = +3
Query: 9 VNIPVIALCNTDSPLRFVDIAIPCNTKSSHSIGLMWWLLAREVLRLRGVLSRDQRWDVVV 188
VN+P IAL + DS DIA PCN K HS+GLM W+LA E L + + + W
Sbjct: 93 VNLPPIALYDADSSWCSADIA-PCNIKGVHSVGLMCWVLAGEALSF--LNTHEWSWP--- 146
Query: 189 DLFFYRD 209
D++FYRD
Sbjct: 147 DVYFYRD 153
>UniRef50_Q8TT39 Cluster: 30S ribosomal protein S2P; n=10;
Euryarchaeota|Rep: 30S ribosomal protein S2P -
Methanosarcina acetivorans
Length = 225
Score = 53.2 bits (122), Expect = 1e-06
Identities = 22/46 (47%), Positives = 33/46 (71%)
Frame = +3
Query: 9 VNIPVIALCNTDSPLRFVDIAIPCNTKSSHSIGLMWWLLAREVLRL 146
+ +PV+ALC+T++ VD+ IP N K ++ L++WLLAREV RL
Sbjct: 164 IGVPVVALCDTNNLTSNVDLVIPTNNKGRKALSLVYWLLAREVSRL 209
>UniRef50_A0RY14 Cluster: Ribosomal protein S2; n=2;
Thermoprotei|Rep: Ribosomal protein S2 - Cenarchaeum
symbiosum
Length = 208
Score = 52.0 bits (119), Expect = 3e-06
Identities = 24/69 (34%), Positives = 39/69 (56%)
Frame = +3
Query: 3 TRVNIPVIALCNTDSPLRFVDIAIPCNTKSSHSIGLMWWLLAREVLRLRGVLSRDQRWDV 182
T IPVI + N+D+ +D+ IP N + ++ ++WLLAREVL +RG + +
Sbjct: 135 TNAGIPVIGIANSDNVTSRLDVIIPANNRGRGALAAIFWLLAREVLVIRGEVDETKPMKY 194
Query: 183 VVDLFFYRD 209
+D F +D
Sbjct: 195 EIDDFETKD 203
>UniRef50_P29202 Cluster: 30S ribosomal protein S2P; n=12;
Euryarchaeota|Rep: 30S ribosomal protein S2P -
Haloarcula marismortui (Halobacterium marismortui)
Length = 267
Score = 49.2 bits (112), Expect = 2e-05
Identities = 20/48 (41%), Positives = 32/48 (66%)
Frame = +3
Query: 9 VNIPVIALCNTDSPLRFVDIAIPCNTKSSHSIGLMWWLLAREVLRLRG 152
V IPVIA+C++++ VD+ +P N K ++ +++WLLA E L RG
Sbjct: 206 VGIPVIAMCDSNNTTSNVDLVVPTNNKGRKALSVVYWLLANETLDRRG 253
>UniRef50_Q3LVY7 Cluster: Ribosomal RNA S0; n=1; Bigelowiella
natans|Rep: Ribosomal RNA S0 - Bigelowiella natans
(Pedinomonas minutissima) (Chlorarachnion sp.(strain
CCMP 621))
Length = 211
Score = 48.0 bits (109), Expect = 4e-05
Identities = 18/47 (38%), Positives = 32/47 (68%)
Frame = +3
Query: 3 TRVNIPVIALCNTDSPLRFVDIAIPCNTKSSHSIGLMWWLLAREVLR 143
+ +NIP+I +CNTD+ + F+D +P NT S S ++++L+ R + R
Sbjct: 130 SNINIPIIGICNTDTNISFIDWVLPSNTNSKFSNAMIFYLIGRLLKR 176
>UniRef50_UPI0000EB0B97 Cluster: UPI0000EB0B97 related cluster; n=1;
Canis lupus familiaris|Rep: UPI0000EB0B97 UniRef100
entry - Canis familiaris
Length = 258
Score = 46.4 bits (105), Expect = 1e-04
Identities = 24/51 (47%), Positives = 32/51 (62%)
Frame = +3
Query: 9 VNIPVIALCNTDSPLRFVDIAIPCNTKSSHSIGLMWWLLAREVLRLRGVLS 161
VN+ IAL N+ SPL + IAIP ++K +H++G WLLA VL G S
Sbjct: 121 VNLLTIALRNSQSPLHCMGIAIPHDSKGAHTVGRRKWLLAWGVLHACGTTS 171
>UniRef50_Q8SS60 Cluster: 40S RIBOSOMAL PROTEIN SA or P40; n=1;
Encephalitozoon cuniculi|Rep: 40S RIBOSOMAL PROTEIN SA
or P40 - Encephalitozoon cuniculi
Length = 252
Score = 46.0 bits (104), Expect = 2e-04
Identities = 27/68 (39%), Positives = 41/68 (60%), Gaps = 2/68 (2%)
Frame = +3
Query: 12 NIPVIALCNTDSPLRFVDIAIPCNTKSSHSIGLMWWLLAREV--LRLRGVLSRDQRWDVV 185
N+P IA NTD+ L VDIAIP N +S +I +++L+R + ++ L RD +
Sbjct: 146 NLPTIAFVNTDNSLVGVDIAIPMNNRSPSAIAAGFFILSRLINYMKTGAELVRDMK---E 202
Query: 186 VDLFFYRD 209
V+LF +RD
Sbjct: 203 VELFLFRD 210
>UniRef50_Q4P1B8 Cluster: Putative uncharacterized protein; n=1;
Ustilago maydis|Rep: Putative uncharacterized protein -
Ustilago maydis (Smut fungus)
Length = 251
Score = 45.2 bits (102), Expect = 3e-04
Identities = 23/51 (45%), Positives = 31/51 (60%)
Frame = +3
Query: 57 FVDIAIPCNTKSSHSIGLMWWLLAREVLRLRGVLSRDQRWDVVVDLFFYRD 209
FVDIAIP N + HS+ ++W LL R VLRL+G ++ +FFY D
Sbjct: 112 FVDIAIPGNVRGRHSVVILWCLLCRTVLRLKG-----GDLSMMPGMFFYHD 157
>UniRef50_Q9PRB9 Cluster: 30S ribosomal protein S2; n=1; Ureaplasma
parvum|Rep: 30S ribosomal protein S2 - Ureaplasma parvum
(Ureaplasma urealyticum biotype 1)
Length = 349
Score = 41.9 bits (94), Expect = 0.003
Identities = 21/49 (42%), Positives = 30/49 (61%)
Frame = +3
Query: 6 RVNIPVIALCNTDSPLRFVDIAIPCNTKSSHSIGLMWWLLAREVLRLRG 152
++NIPVIAL NT++ + +D IP N S SI L+ +LA + L G
Sbjct: 230 KLNIPVIALANTNADPQLIDYIIPVNNYSVKSITLILGVLADSIAELHG 278
>UniRef50_Q8EUG1 Cluster: Ribosomal protein S2; n=1; Mycoplasma
penetrans|Rep: Ribosomal protein S2 - Mycoplasma
penetrans
Length = 367
Score = 39.5 bits (88), Expect = 0.014
Identities = 20/49 (40%), Positives = 28/49 (57%)
Frame = +3
Query: 9 VNIPVIALCNTDSPLRFVDIAIPCNTKSSHSIGLMWWLLAREVLRLRGV 155
+ IPVIA+CNT++ VD IP N S S+ L+ LL V +G+
Sbjct: 284 LGIPVIAICNTNANPDLVDYVIPANNHSIKSVYLLVGLLCDAVAEAKGL 332
>UniRef50_Q7NAW2 Cluster: RpsB; n=1; Mycoplasma gallisepticum|Rep:
RpsB - Mycoplasma gallisepticum
Length = 323
Score = 37.9 bits (84), Expect = 0.044
Identities = 19/49 (38%), Positives = 28/49 (57%)
Frame = +3
Query: 6 RVNIPVIALCNTDSPLRFVDIAIPCNTKSSHSIGLMWWLLAREVLRLRG 152
++ IPVIALCNT+S + + IP N + S+ L+ LL V +G
Sbjct: 221 KLRIPVIALCNTNSDPNVITLPIPANNYNIRSVTLLLNLLGDAVALAQG 269
>UniRef50_P75560 Cluster: 30S ribosomal protein S2; n=4;
Mycoplasma|Rep: 30S ribosomal protein S2 - Mycoplasma
pneumoniae
Length = 294
Score = 37.5 bits (83), Expect = 0.058
Identities = 19/49 (38%), Positives = 26/49 (53%)
Frame = +3
Query: 9 VNIPVIALCNTDSPLRFVDIAIPCNTKSSHSIGLMWWLLAREVLRLRGV 155
+ IPV+ALCNT++ VD IP N S L+ LLA V + +
Sbjct: 194 LRIPVVALCNTNTNPELVDFIIPANNHQPQSTCLLMNLLADAVAEAKAM 242
>UniRef50_A3AIV8 Cluster: Putative uncharacterized protein; n=1;
Oryza sativa (japonica cultivar-group)|Rep: Putative
uncharacterized protein - Oryza sativa subsp. japonica
(Rice)
Length = 280
Score = 35.5 bits (78), Expect = 0.23
Identities = 13/22 (59%), Positives = 17/22 (77%)
Frame = +3
Query: 144 LRGVLSRDQRWDVVVDLFFYRD 209
+RG + +WDV+VDLFFYRD
Sbjct: 161 MRGTILPGHKWDVMVDLFFYRD 182
>UniRef50_Q5A8K1 Cluster: Likely mitochondrial ribosomal protein;
n=3; Saccharomycetales|Rep: Likely mitochondrial
ribosomal protein - Candida albicans (Yeast)
Length = 460
Score = 35.1 bits (77), Expect = 0.31
Identities = 15/39 (38%), Positives = 22/39 (56%)
Frame = +3
Query: 15 IPVIALCNTDSPLRFVDIAIPCNTKSSHSIGLMWWLLAR 131
IP I LC+TD + IPCN S S+ LM ++++
Sbjct: 396 IPTIGLCDTDMEPSLLTYPIPCNDDSVRSVNLMLGIMSK 434
>UniRef50_Q6MGY6 Cluster: 30S ribosomal protein S2; n=3;
Deltaproteobacteria|Rep: 30S ribosomal protein S2 -
Bdellovibrio bacteriovorus
Length = 313
Score = 33.1 bits (72), Expect = 1.2
Identities = 18/41 (43%), Positives = 25/41 (60%)
Frame = +3
Query: 6 RVNIPVIALCNTDSPLRFVDIAIPCNTKSSHSIGLMWWLLA 128
R+ IPV+A+ +T+S VD AIP N + SI L L+A
Sbjct: 178 RLGIPVVAIADTNSDPESVDFAIPGNDDAIRSIKLFSNLVA 218
>UniRef50_Q6E782 Cluster: Ribosomal protein S2; n=4; Oomycetes|Rep:
Ribosomal protein S2 - Saprolegnia ferax
Length = 198
Score = 33.1 bits (72), Expect = 1.2
Identities = 15/44 (34%), Positives = 28/44 (63%)
Frame = +3
Query: 12 NIPVIALCNTDSPLRFVDIAIPCNTKSSHSIGLMWWLLAREVLR 143
NIP+I L NT+S + +++ I NTK+ S+ + +L+ + L+
Sbjct: 155 NIPIITLNNTNSNIDYINYPIFSNTKNLKSLFFLIYLIRKTFLK 198
>UniRef50_Q6BNP9 Cluster: Debaryomyces hansenii chromosome E of
strain CBS767 of Debaryomyces hansenii; n=2;
Saccharomycetaceae|Rep: Debaryomyces hansenii chromosome
E of strain CBS767 of Debaryomyces hansenii -
Debaryomyces hansenii (Yeast) (Torulaspora hansenii)
Length = 468
Score = 33.1 bits (72), Expect = 1.2
Identities = 15/39 (38%), Positives = 21/39 (53%)
Frame = +3
Query: 15 IPVIALCNTDSPLRFVDIAIPCNTKSSHSIGLMWWLLAR 131
IP I LC+TD + IPCN S + LM +L++
Sbjct: 386 IPTIGLCDTDMEPSLLTYPIPCNDDSMRASSLMTGILSK 424
>UniRef50_Q98Q36 Cluster: 30S ribosomal protein S2; n=2;
Mycoplasma|Rep: 30S ribosomal protein S2 - Mycoplasma
pulmonis
Length = 330
Score = 33.1 bits (72), Expect = 1.2
Identities = 15/46 (32%), Positives = 27/46 (58%)
Frame = +3
Query: 15 IPVIALCNTDSPLRFVDIAIPCNTKSSHSIGLMWWLLAREVLRLRG 152
+ +I + ++D+ FVD+ IP N S SI L+ +LA ++ +G
Sbjct: 200 VKIIGILDSDANPDFVDLGIPANDDSIKSISLILTVLADAIVNAKG 245
>UniRef50_Q6F0Q4 Cluster: 30S ribosomal protein S2; n=4;
Mollicutes|Rep: 30S ribosomal protein S2 - Mesoplasma
florum (Acholeplasma florum)
Length = 266
Score = 32.7 bits (71), Expect = 1.6
Identities = 14/36 (38%), Positives = 21/36 (58%)
Frame = +3
Query: 6 RVNIPVIALCNTDSPLRFVDIAIPCNTKSSHSIGLM 113
++NIPVI LC+T+ V + IP N S+ +M
Sbjct: 180 KLNIPVIGLCDTNVDPDIVTLPIPANDDLQESVNIM 215
>UniRef50_P19679 Cluster: 30S ribosomal protein S2; n=3;
Firmicutes|Rep: 30S ribosomal protein S2 - Spiroplasma
citri
Length = 359
Score = 31.9 bits (69), Expect = 2.9
Identities = 14/36 (38%), Positives = 23/36 (63%)
Frame = +3
Query: 6 RVNIPVIALCNTDSPLRFVDIAIPCNTKSSHSIGLM 113
++ IPVIA+C+T+ +D IP N +S SI ++
Sbjct: 179 KLRIPVIAICDTNVDPVPIDYIIPANDDTSRSIAII 214
>UniRef50_Q9RU79 Cluster: 30S ribosomal protein S2; n=7;
Bacteria|Rep: 30S ribosomal protein S2 - Deinococcus
radiodurans
Length = 264
Score = 31.9 bits (69), Expect = 2.9
Identities = 17/49 (34%), Positives = 27/49 (55%)
Frame = +3
Query: 6 RVNIPVIALCNTDSPLRFVDIAIPCNTKSSHSIGLMWWLLAREVLRLRG 152
++ IPVIAL +TDS +D +P N + SI L+ + ++ RG
Sbjct: 178 KLGIPVIALADTDSDPDVIDYIVPGNDDAIRSIQLITHRVGDLLVEARG 226
>UniRef50_Q8EEV7 Cluster: Putative uncharacterized protein; n=12;
Shewanella|Rep: Putative uncharacterized protein -
Shewanella oneidensis
Length = 206
Score = 31.5 bits (68), Expect = 3.8
Identities = 13/27 (48%), Positives = 18/27 (66%)
Frame = -1
Query: 303 SIPHELSAALPLWERRQPVP*LVALPS 223
S+PH +A L LW+ QP+P +AL S
Sbjct: 10 SVPHPFTAYLSLWDENQPLPSEMALRS 36
>UniRef50_Q7NJK2 Cluster: 30S ribosomal protein S2; n=154; cellular
organisms|Rep: 30S ribosomal protein S2 - Gloeobacter
violaceus
Length = 274
Score = 31.5 bits (68), Expect = 3.8
Identities = 15/41 (36%), Positives = 24/41 (58%)
Frame = +3
Query: 6 RVNIPVIALCNTDSPLRFVDIAIPCNTKSSHSIGLMWWLLA 128
R+NIP+++L +T+ D+ IP N + SI L+ LA
Sbjct: 178 RLNIPIVSLLDTNCDPDLTDVGIPANDDAIRSIRLIVGKLA 218
>UniRef50_Q9VDY5 Cluster: CG5237-PA; n=2; Sophophora|Rep: CG5237-PA -
Drosophila melanogaster (Fruit fly)
Length = 2958
Score = 31.1 bits (67), Expect = 5.0
Identities = 15/41 (36%), Positives = 17/41 (41%)
Frame = -1
Query: 234 ALPSHSLQGHDRRTSQRQHPNAGHD*EHHGVSILHVLTTTT 112
A P H+ H HP+ H HH S HV TT T
Sbjct: 1357 AFPYHTHHHHPHGHHPYPHPHPHHHPHHHAGSSAHVATTAT 1397
>UniRef50_A3RYH1 Cluster: C4-dicarboxylate-binding protein; n=3;
Burkholderiaceae|Rep: C4-dicarboxylate-binding protein -
Ralstonia solanacearum UW551
Length = 386
Score = 30.7 bits (66), Expect = 6.6
Identities = 15/42 (35%), Positives = 22/42 (52%)
Frame = -3
Query: 199 KNKSTTTSQRWSRLRTPRSLNTSRANNHHIRPMECEDLVLHG 74
K T Q+W+RLRT + NT R ++H+ +E L G
Sbjct: 311 KAAEMTELQQWARLRTRLAENTRRMQDNHVAIVETPSPELRG 352
>UniRef50_A7AMH6 Cluster: Putative uncharacterized protein; n=1;
Babesia bovis|Rep: Putative uncharacterized protein -
Babesia bovis
Length = 439
Score = 30.7 bits (66), Expect = 6.6
Identities = 18/52 (34%), Positives = 27/52 (51%), Gaps = 1/52 (1%)
Frame = -3
Query: 187 TTTSQRWSRLRTPRSLNTSRANNHHIRPMECEDLVLHGIAMST-NLRGESVL 35
++ S RWS+ +T R L S + HH+ E L H + T NLR ++L
Sbjct: 19 SSDSSRWSQCKTVRDLLQSVQHVHHMDEAELRHLEAHSRNLLTGNLRDAAML 70
>UniRef50_UPI000049963A Cluster: AAA family ATPase; n=1; Entamoeba
histolytica HM-1:IMSS|Rep: AAA family ATPase - Entamoeba
histolytica HM-1:IMSS
Length = 712
Score = 30.3 bits (65), Expect = 8.7
Identities = 14/34 (41%), Positives = 22/34 (64%)
Frame = +1
Query: 166 TSVGMLSLTCSSIVTLKRVRRKSNKLRNRLSSLP 267
TS+ L+L+C S ++V+R +NKLR L + P
Sbjct: 84 TSITELTLSCLSDEQFEQVKRLTNKLRKELLNFP 117
>UniRef50_Q9J8A5 Cluster: ORF30; n=1; Spodoptera exigua MNPV|Rep:
ORF30 - Spodoptera exigua MNPV
Length = 886
Score = 30.3 bits (65), Expect = 8.7
Identities = 14/47 (29%), Positives = 31/47 (65%)
Frame = +1
Query: 145 SVVFLVVTSVGMLSLTCSSIVTLKRVRRKSNKLRNRLSSLPKWKRRR 285
+V +V+T VG ++C++I+T+ V+ +NK N +SS ++ +++
Sbjct: 830 TVTVVVLTIVG---ISCNTIITITIVKHYNNKTNNLISSTLQYNKQK 873
>UniRef50_A6EB55 Cluster: 30S ribosomal subunit protein S2; n=3;
Bacteroidetes/Chlorobi group|Rep: 30S ribosomal subunit
protein S2 - Pedobacter sp. BAL39
Length = 276
Score = 30.3 bits (65), Expect = 8.7
Identities = 13/36 (36%), Positives = 22/36 (61%)
Frame = +3
Query: 6 RVNIPVIALCNTDSPLRFVDIAIPCNTKSSHSIGLM 113
++NIP A+ +T+S +D IP N ++ SI L+
Sbjct: 178 KLNIPTFAMVDTNSDPSNIDFPIPANDDATKSISLI 213
>UniRef50_P32902 Cluster: 37S ribosomal protein MRP4, mitochondrial
precursor; n=6; Saccharomycetales|Rep: 37S ribosomal
protein MRP4, mitochondrial precursor - Saccharomyces
cerevisiae (Baker's yeast)
Length = 394
Score = 30.3 bits (65), Expect = 8.7
Identities = 19/52 (36%), Positives = 28/52 (53%), Gaps = 1/52 (1%)
Frame = +3
Query: 15 IPVIALCNTDSPLRFVDIAIPCNTKSSHSIGLMWWLLAREVLR-LRGVLSRD 167
+P IA+ +TDS V IP N S S+ + +LAR R L+ L+R+
Sbjct: 340 VPTIAIIDTDSEPSLVTYPIPGNDDSLRSVNFLLGVLARAGQRGLQNRLARN 391
Database: uniref50
Posted date: Oct 5, 2007 11:19 AM
Number of letters in database: 575,637,011
Number of sequences in database: 1,657,284
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 258,675,948
Number of Sequences: 1657284
Number of extensions: 4091178
Number of successful extensions: 12096
Number of sequences better than 10.0: 57
Number of HSP's better than 10.0 without gapping: 11862
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 12083
length of database: 575,637,011
effective HSP length: 80
effective length of database: 443,054,291
effective search space used: 10190248693
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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