Samia BLAST Result against tribolium

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= S06A01NCLL0023_K02
         (312 letters)

Database: tribolium 
           336 sequences; 122,585 total letters

Searching.......................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

X06905-1|CAA30009.1|  489|Tribolium castaneum protein ( Triboliu...    21   4.0  
U04271-2|AAA03709.1|  490|Tribolium castaneum alpha-amylase II p...    21   4.0  
U04271-1|AAA03708.1|  490|Tribolium castaneum alpha-amylase I pr...    21   4.0  
AM292339-1|CAL23151.2|  387|Tribolium castaneum gustatory recept...    20   5.3  
AY695256-1|AAW21973.1|  168|Tribolium castaneum ventral nerve co...    20   6.9  
AF217810-1|AAF71998.1|  431|Tribolium castaneum fork head orthol...    20   6.9  

>X06905-1|CAA30009.1|  489|Tribolium castaneum protein ( Tribolium
           castaneum mRNAfor alhpa amylase 3'region. ).
          Length = 489

 Score = 20.6 bits (41), Expect = 4.0
 Identities = 8/13 (61%), Positives = 9/13 (69%)
 Frame = -1

Query: 285 SAALPLWERRQPV 247
           S+  P WER QPV
Sbjct: 69  SSNRPWWERYQPV 81


>U04271-2|AAA03709.1|  490|Tribolium castaneum alpha-amylase II
           protein.
          Length = 490

 Score = 20.6 bits (41), Expect = 4.0
 Identities = 8/13 (61%), Positives = 9/13 (69%)
 Frame = -1

Query: 285 SAALPLWERRQPV 247
           S+  P WER QPV
Sbjct: 70  SSNRPWWERYQPV 82


>U04271-1|AAA03708.1|  490|Tribolium castaneum alpha-amylase I
           protein.
          Length = 490

 Score = 20.6 bits (41), Expect = 4.0
 Identities = 8/13 (61%), Positives = 9/13 (69%)
 Frame = -1

Query: 285 SAALPLWERRQPV 247
           S+  P WER QPV
Sbjct: 70  SSNRPWWERYQPV 82


>AM292339-1|CAL23151.2|  387|Tribolium castaneum gustatory receptor
           candidate 18 protein.
          Length = 387

 Score = 20.2 bits (40), Expect = 5.3
 Identities = 8/32 (25%), Positives = 15/32 (46%)
 Frame = +3

Query: 12  NIPVIALCNTDSPLRFVDIAIPCNTKSSHSIG 107
           N  + A+C +     F+ +    N K + S+G
Sbjct: 351 NALLFAICGSAFSYLFIMLQFDLNNKKNQSLG 382


>AY695256-1|AAW21973.1|  168|Tribolium castaneum ventral nerve cord
           defective protein protein.
          Length = 168

 Score = 19.8 bits (39), Expect = 6.9
 Identities = 7/18 (38%), Positives = 9/18 (50%)
 Frame = -1

Query: 213 QGHDRRTSQRQHPNAGHD 160
           Q H  +T + QH    HD
Sbjct: 89  QNHRYKTKRAQHEKGMHD 106


>AF217810-1|AAF71998.1|  431|Tribolium castaneum fork head
           orthologue protein.
          Length = 431

 Score = 19.8 bits (39), Expect = 6.9
 Identities = 9/20 (45%), Positives = 11/20 (55%)
 Frame = -1

Query: 225 SHSLQGHDRRTSQRQHPNAG 166
           SHS  G+D   S   H +AG
Sbjct: 408 SHSTIGNDYYNSPLYHTSAG 427


  Database: tribolium
    Posted date:  Oct 23, 2007  1:18 PM
  Number of letters in database: 122,585
  Number of sequences in database:  336
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 59,938
Number of Sequences: 336
Number of extensions: 1023
Number of successful extensions: 6
Number of sequences better than 10.0: 6
Number of HSP's better than 10.0 without gapping: 6
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 6
length of database: 122,585
effective HSP length: 49
effective length of database: 106,121
effective search space used:  5730534
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 38 (20.3 bits)