Samia BLAST Result against mosquito

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= S06A01NCLL0023_K02
         (312 letters)

Database: mosquito 
           2352 sequences; 563,979 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

M93690-2|AAA29363.1| 1212|Anopheles gambiae unknown protein.           23   3.5  
EF588503-1|ABQ96738.1|  169|Anopheles gambiae transposase protein.     22   4.6  
AJ271193-1|CAB66001.1| 1623|Anopheles gambiae laminin gamma 1 pr...    22   6.1  

>M93690-2|AAA29363.1| 1212|Anopheles gambiae unknown protein.
          Length = 1212

 Score = 22.6 bits (46), Expect = 3.5
 Identities = 7/26 (26%), Positives = 17/26 (65%)
 Frame = +1

Query: 226  RKSNKLRNRLSSLPKWKRRRQFMRNG 303
            R++ +L +    + +W+ R++ +RNG
Sbjct: 1141 REAARLEDGRRRVARWRERQRMIRNG 1166


>EF588503-1|ABQ96738.1|  169|Anopheles gambiae transposase protein.
          Length = 169

 Score = 22.2 bits (45), Expect = 4.6
 Identities = 9/25 (36%), Positives = 14/25 (56%)
 Frame = +2

Query: 44  LTSQIC*HCYPMQH*VFTLHRSYVV 118
           L   IC  C P    V+TL+ +Y++
Sbjct: 112 LLDLICKECLPFNLVVYTLNPNYIM 136


>AJ271193-1|CAB66001.1| 1623|Anopheles gambiae laminin gamma 1
           precursor protein.
          Length = 1623

 Score = 21.8 bits (44), Expect = 6.1
 Identities = 6/16 (37%), Positives = 11/16 (68%)
 Frame = -3

Query: 136 TSRANNHHIRPMECED 89
           ++  N H++ P+EC D
Sbjct: 27  SANENTHYLPPLECVD 42


  Database: mosquito
    Posted date:  Oct 23, 2007  1:18 PM
  Number of letters in database: 563,979
  Number of sequences in database:  2352
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 273,670
Number of Sequences: 2352
Number of extensions: 4174
Number of successful extensions: 8
Number of sequences better than 10.0: 3
Number of HSP's better than 10.0 without gapping: 8
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 8
length of database: 563,979
effective HSP length: 56
effective length of database: 432,267
effective search space used: 20316549
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)