Samia BLAST Result against bee

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= S06A01NCLL0023_K02
         (312 letters)

Database: bee 
           438 sequences; 146,343 total letters

Searching......................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

EF625898-1|ABR45905.1|  686|Apis mellifera hexamerin protein.          23   1.1  
EF589162-1|ABQ84439.1|  686|Apis mellifera hexamerin 70c protein.      23   1.1  
DQ666693-1|ABG29167.1|  250|Apis mellifera MAX dimerization prot...    21   4.6  
AY155490-1|AAO12861.1|  342|Apis mellifera Ammar1 transposase pr...    21   4.6  
AM050259-1|CAJ18340.1|  683|Apis mellifera putative H3K9 methylt...    20   6.0  
DQ011227-1|AAY63896.1|  484|Apis mellifera Amt-1-like protein pr...    20   8.0  
AB022908-1|BAA86909.1|  493|Apis mellifera amylase protein.            20   8.0  

>EF625898-1|ABR45905.1|  686|Apis mellifera hexamerin protein.
          Length = 686

 Score = 22.6 bits (46), Expect = 1.1
 Identities = 11/23 (47%), Positives = 14/23 (60%)
 Frame = +1

Query: 244 RNRLSSLPKWKRRRQFMRNGLRM 312
           RNR SSLP +K +   + N L M
Sbjct: 312 RNRFSSLPYYKYKYLNVINALEM 334


>EF589162-1|ABQ84439.1|  686|Apis mellifera hexamerin 70c protein.
          Length = 686

 Score = 22.6 bits (46), Expect = 1.1
 Identities = 11/23 (47%), Positives = 14/23 (60%)
 Frame = +1

Query: 244 RNRLSSLPKWKRRRQFMRNGLRM 312
           RNR SSLP +K +   + N L M
Sbjct: 312 RNRFSSLPYYKYKYLNVINALEM 334


>DQ666693-1|ABG29167.1|  250|Apis mellifera MAX dimerization protein
           protein.
          Length = 250

 Score = 20.6 bits (41), Expect = 4.6
 Identities = 12/40 (30%), Positives = 22/40 (55%)
 Frame = +1

Query: 166 TSVGMLSLTCSSIVTLKRVRRKSNKLRNRLSSLPKWKRRR 285
           T++G+L+     I +L+   RK    + +LS   ++ RRR
Sbjct: 85  TTLGLLTKAKRFIKSLEERERKHAVHKEQLSREQRFLRRR 124


>AY155490-1|AAO12861.1|  342|Apis mellifera Ammar1 transposase
           protein.
          Length = 342

 Score = 20.6 bits (41), Expect = 4.6
 Identities = 6/15 (40%), Positives = 10/15 (66%)
 Frame = +3

Query: 147 RGVLSRDQRWDVVVD 191
           RG++   +RW  V+D
Sbjct: 320 RGIMMLPERWQKVID 334


>AM050259-1|CAJ18340.1|  683|Apis mellifera putative H3K9
           methyltransferase protein.
          Length = 683

 Score = 20.2 bits (40), Expect = 6.0
 Identities = 9/19 (47%), Positives = 11/19 (57%)
 Frame = +1

Query: 244 RNRLSSLPKWKRRRQFMRN 300
           RNRL  L  +KR+  F  N
Sbjct: 293 RNRLQLLESFKRKVNFYPN 311


>DQ011227-1|AAY63896.1|  484|Apis mellifera Amt-1-like protein
           protein.
          Length = 484

 Score = 19.8 bits (39), Expect = 8.0
 Identities = 12/42 (28%), Positives = 18/42 (42%)
 Frame = +1

Query: 148 VVFLVVTSVGMLSLTCSSIVTLKRVRRKSNKLRNRLSSLPKW 273
           ++F + T  GML   C S+     +  K N +   L  L  W
Sbjct: 40  IIFTMQTGFGMLESGCVSLKNEVNIMMK-NVVDIVLGGLTYW 80


>AB022908-1|BAA86909.1|  493|Apis mellifera amylase protein.
          Length = 493

 Score = 19.8 bits (39), Expect = 8.0
 Identities = 6/9 (66%), Positives = 7/9 (77%)
 Frame = -1

Query: 273 PLWERRQPV 247
           P WER QP+
Sbjct: 75  PWWERYQPI 83


  Database: bee
    Posted date:  Oct 23, 2007  1:17 PM
  Number of letters in database: 146,343
  Number of sequences in database:  438
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 70,787
Number of Sequences: 438
Number of extensions: 938
Number of successful extensions: 9
Number of sequences better than 10.0: 7
Number of HSP's better than 10.0 without gapping: 9
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 9
length of database: 146,343
effective HSP length: 50
effective length of database: 124,443
effective search space used:  6595479
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 38 (20.3 bits)