Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= S06A01NCLL0023_J24
(247 letters)
Database: mosquito
2352 sequences; 563,979 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
AY344835-1|AAR05806.1| 334|Anopheles gambiae ICHIT protein. 24 0.69
AY344834-1|AAR05805.1| 334|Anopheles gambiae ICHIT protein. 24 0.69
AY344833-1|AAR05804.1| 334|Anopheles gambiae ICHIT protein. 24 0.69
AY344832-1|AAR05803.1| 333|Anopheles gambiae ICHIT protein. 24 0.69
AY344831-1|AAR05802.1| 333|Anopheles gambiae ICHIT protein. 24 0.69
AJ010903-1|CAA09389.1| 373|Anopheles gambiae ICHIT protein prot... 24 0.69
AF046924-1|AAC08530.1| 122|Anopheles gambiae mucin protein. 23 1.2
U42429-1|AAB54088.1| 596|Anopheles gambiae engrailed protein. 23 1.6
U42214-1|AAB58461.1| 596|Anopheles gambiae engrailed protein. 23 1.6
AF492464-1|AAM11657.1| 803|Anopheles gambiae beta nu integrin s... 23 1.6
AY785361-1|AAV52865.1| 960|Anopheles gambiae male-specific tran... 22 2.8
AY705396-1|AAU12505.1| 710|Anopheles gambiae nicotinic acetylch... 22 2.8
AB090820-2|BAC57916.1| 1222|Anopheles gambiae reverse transcript... 22 2.8
M93689-2|AAA29367.1| 975|Anopheles gambiae protein ( Anopheles ... 21 4.9
DQ303468-1|ABC18327.1| 1115|Anopheles gambiae putative methopren... 21 4.9
AY280612-1|AAQ21365.1| 309|Anopheles gambiae carbonic anhydrase... 21 4.9
AB090816-2|BAC57908.1| 1201|Anopheles gambiae reverse transcript... 21 6.5
AJ439060-3|CAD27754.1| 1645|Anopheles gambiae hypothetical prote... 21 8.5
>AY344835-1|AAR05806.1| 334|Anopheles gambiae ICHIT protein.
Length = 334
Score = 24.2 bits (50), Expect = 0.69
Identities = 14/49 (28%), Positives = 20/49 (40%), Gaps = 2/49 (4%)
Frame = +3
Query: 3 TMTAPALGRTWC--ILSTPTQSQANPRALHAPTNSTDCGTRRPNPAPKT 143
T +AP W ++T T +P APT +T + P P T
Sbjct: 137 TTSAPTTPSQWTDPTITTTTPIWTDPTTWSAPTTTTTWSDQPPPPTTTT 185
>AY344834-1|AAR05805.1| 334|Anopheles gambiae ICHIT protein.
Length = 334
Score = 24.2 bits (50), Expect = 0.69
Identities = 14/49 (28%), Positives = 20/49 (40%), Gaps = 2/49 (4%)
Frame = +3
Query: 3 TMTAPALGRTWC--ILSTPTQSQANPRALHAPTNSTDCGTRRPNPAPKT 143
T +AP W ++T T +P APT +T + P P T
Sbjct: 137 TTSAPTTPSQWTDPTITTTTPIWTDPTTWSAPTTTTTWSDQPPPPTTTT 185
>AY344833-1|AAR05804.1| 334|Anopheles gambiae ICHIT protein.
Length = 334
Score = 24.2 bits (50), Expect = 0.69
Identities = 14/49 (28%), Positives = 20/49 (40%), Gaps = 2/49 (4%)
Frame = +3
Query: 3 TMTAPALGRTWC--ILSTPTQSQANPRALHAPTNSTDCGTRRPNPAPKT 143
T +AP W ++T T +P APT +T + P P T
Sbjct: 137 TTSAPTTPSQWTDPTITTTTPIWTDPTTWSAPTTTTTWSDQPPPPTTTT 185
>AY344832-1|AAR05803.1| 333|Anopheles gambiae ICHIT protein.
Length = 333
Score = 24.2 bits (50), Expect = 0.69
Identities = 14/49 (28%), Positives = 20/49 (40%), Gaps = 2/49 (4%)
Frame = +3
Query: 3 TMTAPALGRTWC--ILSTPTQSQANPRALHAPTNSTDCGTRRPNPAPKT 143
T +AP W ++T T +P APT +T + P P T
Sbjct: 136 TTSAPTTPSQWTDPTITTTTPVWTDPTTWSAPTTTTTWSDQPPPPTTTT 184
>AY344831-1|AAR05802.1| 333|Anopheles gambiae ICHIT protein.
Length = 333
Score = 24.2 bits (50), Expect = 0.69
Identities = 14/49 (28%), Positives = 20/49 (40%), Gaps = 2/49 (4%)
Frame = +3
Query: 3 TMTAPALGRTWC--ILSTPTQSQANPRALHAPTNSTDCGTRRPNPAPKT 143
T +AP W ++T T +P APT +T + P P T
Sbjct: 136 TTSAPTTPSQWTDPTITTTTPVWTDPTTWSAPTTTTTWSDQPPPPTTTT 184
>AJ010903-1|CAA09389.1| 373|Anopheles gambiae ICHIT protein
protein.
Length = 373
Score = 24.2 bits (50), Expect = 0.69
Identities = 14/49 (28%), Positives = 20/49 (40%), Gaps = 2/49 (4%)
Frame = +3
Query: 3 TMTAPALGRTWC--ILSTPTQSQANPRALHAPTNSTDCGTRRPNPAPKT 143
T +AP W ++T T +P APT +T + P P T
Sbjct: 137 TTSAPTTPSQWTDPTITTTTPVWTDPTTWSAPTTTTTWSDQPPPPTTTT 185
>AF046924-1|AAC08530.1| 122|Anopheles gambiae mucin protein.
Length = 122
Score = 23.4 bits (48), Expect = 1.2
Identities = 17/58 (29%), Positives = 24/58 (41%)
Frame = +3
Query: 3 TMTAPALGRTWCILSTPTQSQANPRALHAPTNSTDCGTRRPNPAPKTRRSAHRPQLGG 176
T T A G+T P Q+ A T + T P+ AP+ ++A P L G
Sbjct: 55 TTTTVAPGQTTTTTVAPGQTTTTTVASGPVTTTGSTDTTTPSSAPQDVKAALVPVLLG 112
>U42429-1|AAB54088.1| 596|Anopheles gambiae engrailed protein.
Length = 596
Score = 23.0 bits (47), Expect = 1.6
Identities = 8/26 (30%), Positives = 14/26 (53%)
Frame = +2
Query: 113 HATPESSTEDTSQCAPPSTGGSAVAP 190
H + ST+D++ P+T G +P
Sbjct: 255 HTDSDCSTQDSTSAPSPATYGDIASP 280
>U42214-1|AAB58461.1| 596|Anopheles gambiae engrailed protein.
Length = 596
Score = 23.0 bits (47), Expect = 1.6
Identities = 8/26 (30%), Positives = 14/26 (53%)
Frame = +2
Query: 113 HATPESSTEDTSQCAPPSTGGSAVAP 190
H + ST+D++ P+T G +P
Sbjct: 255 HTDSDCSTQDSTSAPSPATYGDIASP 280
>AF492464-1|AAM11657.1| 803|Anopheles gambiae beta nu integrin
subunit AgBnu protein.
Length = 803
Score = 23.0 bits (47), Expect = 1.6
Identities = 7/16 (43%), Positives = 12/16 (75%)
Frame = +2
Query: 65 SESPCATCSDQLYRLR 112
++ CA C+D+LY +R
Sbjct: 45 ADKDCAWCTDELYDMR 60
>AY785361-1|AAV52865.1| 960|Anopheles gambiae male-specific
transcription factor FRU-MA protein.
Length = 960
Score = 22.2 bits (45), Expect = 2.8
Identities = 9/25 (36%), Positives = 12/25 (48%)
Frame = +2
Query: 113 HATPESSTEDTSQCAPPSTGGSAVA 187
H T E + + S CA G +A A
Sbjct: 591 HRTTEQADREASVCAAGGVGAAAAA 615
Score = 21.0 bits (42), Expect = 6.5
Identities = 15/52 (28%), Positives = 22/52 (42%)
Frame = +1
Query: 19 HSDAPGAFCRHRLRVKRIPVRYMLRPTLPTAARDARIQHRRHVAVRTALNWG 174
H A A H + P + L+ ++A ++ R VAV ALN G
Sbjct: 713 HGGAAAATGHHHHQHHAAPHHHSLQQQHASSAFNSAGDARSGVAVAAALNTG 764
>AY705396-1|AAU12505.1| 710|Anopheles gambiae nicotinic
acetylcholine receptor subunitalpha 3 protein.
Length = 710
Score = 22.2 bits (45), Expect = 2.8
Identities = 10/25 (40%), Positives = 14/25 (56%)
Frame = +3
Query: 39 ILSTPTQSQANPRALHAPTNSTDCG 113
+LS + + NP A +A NST G
Sbjct: 473 LLSAASTAVPNPAATNATANSTTTG 497
>AB090820-2|BAC57916.1| 1222|Anopheles gambiae reverse transcriptase
protein.
Length = 1222
Score = 22.2 bits (45), Expect = 2.8
Identities = 13/42 (30%), Positives = 18/42 (42%)
Frame = +1
Query: 85 MLRPTLPTAARDARIQHRRHVAVRTALNWGECCGTLAVGRHG 210
M R LP + R R +H R + ++ GTL HG
Sbjct: 1121 MRRRGLPPSPRTVRARHERRLYLQRLYRQRAREGTLPTVPHG 1162
>M93689-2|AAA29367.1| 975|Anopheles gambiae protein ( Anopheles
gambiae T1 retroposon. ).
Length = 975
Score = 21.4 bits (43), Expect = 4.9
Identities = 11/29 (37%), Positives = 13/29 (44%), Gaps = 1/29 (3%)
Frame = +2
Query: 71 SPCATC-SDQLYRLRHATPESSTEDTSQC 154
SP A SD +RH P S +S C
Sbjct: 164 SPAAAVRSDSSLPMRHYVPHISLNSSSSC 192
>DQ303468-1|ABC18327.1| 1115|Anopheles gambiae putative
methoprene-tolerant protein protein.
Length = 1115
Score = 21.4 bits (43), Expect = 4.9
Identities = 9/24 (37%), Positives = 11/24 (45%)
Frame = +3
Query: 132 APKTRRSAHRPQLGGVLWHPSGGE 203
A KT R + G W P GG+
Sbjct: 726 AAKTMREGRCSSVSGGDWSPMGGD 749
>AY280612-1|AAQ21365.1| 309|Anopheles gambiae carbonic anhydrase
protein.
Length = 309
Score = 21.4 bits (43), Expect = 4.9
Identities = 8/15 (53%), Positives = 8/15 (53%)
Frame = +2
Query: 161 PSTGGSAVAP*RWGG 205
P T G P RWGG
Sbjct: 28 PGTNGVMSEPERWGG 42
>AB090816-2|BAC57908.1| 1201|Anopheles gambiae reverse transcriptase
protein.
Length = 1201
Score = 21.0 bits (42), Expect = 6.5
Identities = 12/40 (30%), Positives = 22/40 (55%), Gaps = 3/40 (7%)
Frame = +3
Query: 60 SQANPR-ALHAPTNSTD--CGTRRPNPAPKTRRSAHRPQL 170
+Q N R +L++ N+++ G R P P+P R R ++
Sbjct: 1102 NQDNDRTSLYSARNTSEEQRGRRHPTPSPPPRAVGRRAEV 1141
>AJ439060-3|CAD27754.1| 1645|Anopheles gambiae hypothetical protein
protein.
Length = 1645
Score = 20.6 bits (41), Expect = 8.5
Identities = 12/46 (26%), Positives = 19/46 (41%)
Frame = +2
Query: 53 DSESSESPCATCSDQLYRLRHATPESSTEDTSQCAPPSTGGSAVAP 190
+ E SES C ++ RL+ T +++ S C T P
Sbjct: 769 EPEHSESSDVECVERTERLKVKTTINTSRIPSMCIITPTNSDDEQP 814
Database: mosquito
Posted date: Oct 23, 2007 1:18 PM
Number of letters in database: 563,979
Number of sequences in database: 2352
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 302,205
Number of Sequences: 2352
Number of extensions: 6334
Number of successful extensions: 19
Number of sequences better than 10.0: 18
Number of HSP's better than 10.0 without gapping: 18
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 19
length of database: 563,979
effective HSP length: 53
effective length of database: 439,323
effective search space used: 12301044
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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