Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= S06A01NCLL0023_J22
(283 letters)
Database: rice
37,544 sequences; 14,793,348 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
05_05_0028 + 21691137-21691224,21691539-21691765,21692135-21692161 79 4e-16
01_01_0642 + 4852218-4852305,4852655-4852884,4853103-4853129 68 1e-12
02_04_0074 - 19474786-19474812,19475174-19475400,19476362-194764... 67 2e-12
07_01_1001 - 8460467-8460799 62 6e-11
07_03_0321 + 16757414-16757743 61 1e-10
01_06_0098 - 26416768-26416998 31 0.10
07_03_0809 - 21669632-21669637,21669871-21670131,21670573-216707... 28 0.97
12_01_0731 - 6516894-6517473,6517485-6519574 27 1.7
05_01_0239 - 1785699-1785980,1786061-1786284,1786380-1786526,178... 27 1.7
08_02_0909 - 22515326-22515418,22515992-22516150,22516583-225166... 27 2.2
04_03_0630 - 18182681-18182931,18183397-18183463,18184899-181849... 27 3.0
06_03_1190 - 28274801-28275163,28275662-28275853,28275965-282760... 26 3.9
02_02_0390 - 9640749-9641312 26 3.9
12_01_0993 - 10069179-10070057,10070708-10071049 26 5.2
12_01_0736 + 6582371-6585370 25 9.0
12_01_0718 + 6339982-6342981 25 9.0
12_01_0715 - 6230393-6231559,6233234-6234553 25 9.0
12_01_0708 - 6137865-6140909 25 9.0
11_06_0756 + 26952196-26952264,26952760-26953206,26954009-269553... 25 9.0
06_03_1115 - 27725583-27725864,27726189-27726251,27726345-27727214 25 9.0
03_06_0259 + 32712976-32714335,32714454-32714587,32714904-327151... 25 9.0
01_06_1102 - 34541341-34541561,34541691-34541769,34541880-345419... 25 9.0
01_06_0476 + 29614228-29614300,29614482-29615425 25 9.0
01_01_0223 + 1901898-1901983,1902079-1902154,1902256-1902308,190... 25 9.0
>05_05_0028 + 21691137-21691224,21691539-21691765,21692135-21692161
Length = 113
Score = 79.4 bits (187), Expect = 4e-16
Identities = 36/65 (55%), Positives = 52/65 (80%)
Frame = +1
Query: 52 MRYVAAYLLAVLGGKASPAAADVEKILSSVGIEADSEKLKKVISELNGKNVEELIEAGRG 231
M+ +AAYLLAVLGG SP+A D++ IL SVG+EA+ E+L+ ++SEL GK++ E+I AGR
Sbjct: 1 MKLIAAYLLAVLGGNTSPSADDIKNILESVGVEANDERLEFLLSELEGKDITEVIAAGRE 60
Query: 232 KLSSM 246
K +S+
Sbjct: 61 KFASV 65
>01_01_0642 + 4852218-4852305,4852655-4852884,4853103-4853129
Length = 114
Score = 67.7 bits (158), Expect = 1e-12
Identities = 29/65 (44%), Positives = 48/65 (73%)
Frame = +1
Query: 52 MRYVAAYLLAVLGGKASPAAADVEKILSSVGIEADSEKLKKVISELNGKNVEELIEAGRG 231
M++++AYL+A L G +SP A D+ IL SVG E D+ K++ ++S+++GK++ ELI GR
Sbjct: 1 MKFISAYLMAYLAGNSSPTAEDLTTILESVGCEIDNAKMELLLSQVSGKDITELIACGRE 60
Query: 232 KLSSM 246
K +S+
Sbjct: 61 KFASV 65
>02_04_0074 -
19474786-19474812,19475174-19475400,19476362-19476496,
19478662-19479193
Length = 306
Score = 66.9 bits (156), Expect = 2e-12
Identities = 29/66 (43%), Positives = 48/66 (72%)
Frame = +1
Query: 49 KMRYVAAYLLAVLGGKASPAAADVEKILSSVGIEADSEKLKKVISELNGKNVEELIEAGR 228
+M++++AYLLA L G +P+A D+ IL SVG E D K++ ++S+L GK++ E+I +GR
Sbjct: 193 RMKFISAYLLATLAGNPNPSAEDLTTILESVGAEVDHGKMELLLSQLAGKDITEIIASGR 252
Query: 229 GKLSSM 246
K +S+
Sbjct: 253 EKFASV 258
>07_01_1001 - 8460467-8460799
Length = 110
Score = 62.1 bits (144), Expect = 6e-11
Identities = 28/63 (44%), Positives = 42/63 (66%)
Frame = +1
Query: 52 MRYVAAYLLAVLGGKASPAAADVEKILSSVGIEADSEKLKKVISELNGKNVEELIEAGRG 231
MR+VAAYL+A +GG ASP DV IL +VG + D +KL + ++ GK++ E++ AG
Sbjct: 1 MRFVAAYLMATIGGNASPTKDDVRAILGAVGADVDEDKLGYLFDQVAGKDLSEILAAGSE 60
Query: 232 KLS 240
L+
Sbjct: 61 MLA 63
>07_03_0321 + 16757414-16757743
Length = 109
Score = 61.3 bits (142), Expect = 1e-10
Identities = 28/63 (44%), Positives = 42/63 (66%)
Frame = +1
Query: 52 MRYVAAYLLAVLGGKASPAAADVEKILSSVGIEADSEKLKKVISELNGKNVEELIEAGRG 231
MR+VAAYL+A +GG ASP DV IL +VG + D +KL + ++ GK++ E++ AG
Sbjct: 1 MRFVAAYLMATIGGNASPTKDDVRAILGAVGADIDEDKLGYLFDQVAGKDLAEILAAGSE 60
Query: 232 KLS 240
L+
Sbjct: 61 MLA 63
>01_06_0098 - 26416768-26416998
Length = 76
Score = 31.5 bits (68), Expect = 0.10
Identities = 14/33 (42%), Positives = 20/33 (60%)
Frame = +1
Query: 103 PAAADVEKILSSVGIEADSEKLKKVISELNGKN 201
P V KI+ +V IEADS + K ++ L GK+
Sbjct: 16 PPPPAVVKIIETVHIEADSAEFKSIVQRLTGKD 48
>07_03_0809 -
21669632-21669637,21669871-21670131,21670573-21670752,
21671458-21672819
Length = 602
Score = 28.3 bits (60), Expect = 0.97
Identities = 16/41 (39%), Positives = 23/41 (56%), Gaps = 1/41 (2%)
Frame = +1
Query: 88 GGKA-SPAAADVEKILSSVGIEADSEKLKKVISELNGKNVE 207
GG+ SPA D+ L+ G E DS + ++S+LNG E
Sbjct: 45 GGQGDSPATQDLLSKLNGSGGEGDSPATQDLLSKLNGSGGE 85
>12_01_0731 - 6516894-6517473,6517485-6519574
Length = 889
Score = 27.5 bits (58), Expect = 1.7
Identities = 10/22 (45%), Positives = 15/22 (68%)
Frame = +2
Query: 80 PCWAAKRPQLLLMSKRSSALWG 145
PCW +K PQLL++ +S+ G
Sbjct: 714 PCWMSKLPQLLVLVLKSNRFSG 735
>05_01_0239 -
1785699-1785980,1786061-1786284,1786380-1786526,
1786667-1786775,1786880-1786981,1787090-1787164,
1787277-1787453,1787534-1787623,1787717-1787844,
1787909-1788356
Length = 593
Score = 27.5 bits (58), Expect = 1.7
Identities = 11/13 (84%), Positives = 11/13 (84%)
Frame = +2
Query: 227 AASSLPCRRVAPP 265
A S LPCRRVAPP
Sbjct: 18 ALSRLPCRRVAPP 30
>08_02_0909 -
22515326-22515418,22515992-22516150,22516583-22516658,
22517980-22518141,22518826-22519259,22519723-22521414
Length = 871
Score = 27.1 bits (57), Expect = 2.2
Identities = 14/40 (35%), Positives = 25/40 (62%)
Frame = +1
Query: 124 KILSSVGIEADSEKLKKVISELNGKNVEELIEAGRGKLSS 243
++LS GI++ S K + ++G N++EL AG +L+S
Sbjct: 674 EVLSMSGIQSVSNKFVNELIPVHGSNLKELAFAGCLQLTS 713
>04_03_0630 -
18182681-18182931,18183397-18183463,18184899-18184964,
18185057-18185178,18185263-18185425,18186082-18186329,
18186418-18186751,18186857-18187000,18187079-18187144
Length = 486
Score = 26.6 bits (56), Expect = 3.0
Identities = 13/47 (27%), Positives = 25/47 (53%)
Frame = +1
Query: 85 LGGKASPAAADVEKILSSVGIEADSEKLKKVISELNGKNVEELIEAG 225
+G ASPAAA+++ + + I A + V +E+ + +E + G
Sbjct: 52 IGRPASPAAAEMDTVTTMEAINAKIVSMDIVRAEIKAVDAQESLGGG 98
>06_03_1190 -
28274801-28275163,28275662-28275853,28275965-28276088,
28276177-28276320,28276524-28276640,28277189-28277308,
28277433-28277521,28277609-28277685,28278250-28278322,
28278578-28279012,28280247-28280442,28281270-28281490,
28281591-28281703,28282552-28283146,28283236-28283418,
28283548-28283712,28283808-28284029
Length = 1142
Score = 26.2 bits (55), Expect = 3.9
Identities = 10/29 (34%), Positives = 13/29 (44%)
Frame = +2
Query: 56 VTWPRIYSPCWAAKRPQLLLMSKRSSALW 142
+ WPR W A P L S++S W
Sbjct: 132 IRWPRSRDEVWKANIPHTHLASEKSDQRW 160
>02_02_0390 - 9640749-9641312
Length = 187
Score = 26.2 bits (55), Expect = 3.9
Identities = 14/27 (51%), Positives = 17/27 (62%), Gaps = 1/27 (3%)
Frame = -1
Query: 271 RARRRHPPAWKRACRV-RPQLTLQHFC 194
R RR HP +R RV P+L LQH+C
Sbjct: 125 RGRRLHP---RRHVRVLHPRLPLQHYC 148
>12_01_0993 - 10069179-10070057,10070708-10071049
Length = 406
Score = 25.8 bits (54), Expect = 5.2
Identities = 11/18 (61%), Positives = 14/18 (77%)
Frame = -3
Query: 131 RIFSTSAAAGDALPPNTA 78
R F++SAAAGDA P N +
Sbjct: 384 RAFNSSAAAGDAYPINVS 401
>12_01_0736 + 6582371-6585370
Length = 999
Score = 25.0 bits (52), Expect = 9.0
Identities = 9/22 (40%), Positives = 14/22 (63%)
Frame = +2
Query: 80 PCWAAKRPQLLLMSKRSSALWG 145
PCW +K PQL ++ +S+ G
Sbjct: 726 PCWMSKLPQLQVLVLKSNRFIG 747
>12_01_0718 + 6339982-6342981
Length = 999
Score = 25.0 bits (52), Expect = 9.0
Identities = 9/22 (40%), Positives = 14/22 (63%)
Frame = +2
Query: 80 PCWAAKRPQLLLMSKRSSALWG 145
PCW +K PQL ++ +S+ G
Sbjct: 726 PCWMSKLPQLQVLVLKSNRFIG 747
>12_01_0715 - 6230393-6231559,6233234-6234553
Length = 828
Score = 25.0 bits (52), Expect = 9.0
Identities = 9/22 (40%), Positives = 14/22 (63%)
Frame = +2
Query: 80 PCWAAKRPQLLLMSKRSSALWG 145
PCW +K PQL ++ +S+ G
Sbjct: 653 PCWMSKLPQLQVLVLKSNKFIG 674
>12_01_0708 - 6137865-6140909
Length = 1014
Score = 25.0 bits (52), Expect = 9.0
Identities = 8/22 (36%), Positives = 15/22 (68%)
Frame = +2
Query: 80 PCWAAKRPQLLLMSKRSSALWG 145
PCW +K P+L +++ +S+ G
Sbjct: 742 PCWMSKLPKLQVLALKSNKFTG 763
>11_06_0756 +
26952196-26952264,26952760-26953206,26954009-26955358,
26955400-26955408
Length = 624
Score = 25.0 bits (52), Expect = 9.0
Identities = 14/56 (25%), Positives = 25/56 (44%)
Frame = +1
Query: 16 ARGTFRVLAT*KMRYVAAYLLAVLGGKASPAAADVEKILSSVGIEADSEKLKKVIS 183
+RGT+ + + +A L LGG + AA D L + + ++ +V S
Sbjct: 237 SRGTYSFVDDDNLANIAGALAVCLGGLKTVAAVDTRVSLKAAELSGGGARIVRVDS 292
>06_03_1115 - 27725583-27725864,27726189-27726251,27726345-27727214
Length = 404
Score = 25.0 bits (52), Expect = 9.0
Identities = 12/41 (29%), Positives = 24/41 (58%)
Frame = +1
Query: 97 ASPAAADVEKILSSVGIEADSEKLKKVISELNGKNVEELIE 219
A AAA E ++ +E+ + KKV+++ NG+ ++ + E
Sbjct: 317 AGAAAATAEAAMTERSVESVLFRGKKVMAQTNGERLDGVAE 357
>03_06_0259 +
32712976-32714335,32714454-32714587,32714904-32715144,
32715254-32715462,32715522-32715583,32715690-32715801,
32715916-32716208,32716400-32716520
Length = 843
Score = 25.0 bits (52), Expect = 9.0
Identities = 9/22 (40%), Positives = 15/22 (68%)
Frame = +2
Query: 80 PCWAAKRPQLLLMSKRSSALWG 145
P W + PQL ++S R+++L G
Sbjct: 171 PAWIGELPQLAVLSLRNNSLGG 192
>01_06_1102 -
34541341-34541561,34541691-34541769,34541880-34541929,
34542291-34542576
Length = 211
Score = 25.0 bits (52), Expect = 9.0
Identities = 9/22 (40%), Positives = 15/22 (68%)
Frame = -2
Query: 141 HRAEDLFDISSSWGRFAAQHGE 76
H+A + F +++SW + AA H E
Sbjct: 84 HKAAETFVLANSWRKAAAAHHE 105
>01_06_0476 + 29614228-29614300,29614482-29615425
Length = 338
Score = 25.0 bits (52), Expect = 9.0
Identities = 15/52 (28%), Positives = 29/52 (55%), Gaps = 4/52 (7%)
Frame = +1
Query: 103 PAAADVEKILSSVGIEADSEKL----KKVISELNGKNVEELIEAGRGKLSSM 246
P ++V ++ S GI DS ++ ++ L+G N+ +++ G G LSS+
Sbjct: 41 PGPSEVVQLYRSKGI--DSMRIYFADAAALNALSGSNIGLIMDVGNGNLSSL 90
>01_01_0223 +
1901898-1901983,1902079-1902154,1902256-1902308,
1902400-1902887,1902983-1903143,1903234-1903531,
1903619-1903773
Length = 438
Score = 25.0 bits (52), Expect = 9.0
Identities = 9/16 (56%), Positives = 11/16 (68%)
Frame = -1
Query: 253 PPAWKRACRVRPQLTL 206
PP WK A R +PQL +
Sbjct: 82 PPMWKLAFRFKPQLPI 97
Database: rice
Posted date: Oct 4, 2007 10:57 AM
Number of letters in database: 14,793,348
Number of sequences in database: 37,544
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 7,183,648
Number of Sequences: 37544
Number of extensions: 119081
Number of successful extensions: 490
Number of sequences better than 10.0: 24
Number of HSP's better than 10.0 without gapping: 486
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 490
length of database: 14,793,348
effective HSP length: 70
effective length of database: 12,165,268
effective search space used: 279801164
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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