Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= S06A01NCLL0023_J22
(283 letters)
Database: celegans
27,780 sequences; 12,740,198 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
AL132865-1|CAB60595.1| 110|Caenorhabditis elegans Hypothetical ... 77 2e-15
U97194-7|AAB52450.2| 107|Caenorhabditis elegans Hypothetical pr... 70 2e-13
AF016688-3|AAB66076.2| 674|Caenorhabditis elegans Hypothetical ... 28 0.90
Z75712-1|CAB00040.1| 724|Caenorhabditis elegans Hypothetical pr... 28 1.2
AF125459-7|AAD12836.1| 971|Caenorhabditis elegans Hypothetical ... 28 1.2
Z83228-10|CAB05732.2| 585|Caenorhabditis elegans Hypothetical p... 27 2.7
Z83228-1|CAC70093.1| 568|Caenorhabditis elegans Hypothetical pr... 27 2.7
AF110415-1|AAF21932.1| 568|Caenorhabditis elegans organic catio... 27 2.7
Z83107-10|CAB05505.1| 1963|Caenorhabditis elegans Hypothetical p... 26 3.6
Z81499-3|CAB04089.1| 1963|Caenorhabditis elegans Hypothetical pr... 26 3.6
J01050-1|AAA28124.1| 1966|Caenorhabditis elegans myosin heavy ch... 26 3.6
AC025721-10|AAK29908.2| 1019|Caenorhabditis elegans Hypothetical... 26 3.6
Z46935-10|CAA87054.1| 1244|Caenorhabditis elegans Hypothetical p... 26 4.8
Z46794-13|CAA86786.1| 1244|Caenorhabditis elegans Hypothetical p... 26 4.8
U96387-1|AAC47834.1| 1244|Caenorhabditis elegans mitotic chromos... 26 4.8
AL031266-2|CAA20330.1| 1244|Caenorhabditis elegans Hypothetical ... 26 4.8
Z77661-6|CAB01185.1| 192|Caenorhabditis elegans Hypothetical pr... 25 8.4
Z46996-1|CAA87099.1| 472|Caenorhabditis elegans Hypothetical pr... 25 8.4
U00049-1|AAC47053.2| 288|Caenorhabditis elegans Serpentine rece... 25 8.4
AC024843-1|AAR12983.3| 193|Caenorhabditis elegans Hypothetical ... 25 8.4
>AL132865-1|CAB60595.1| 110|Caenorhabditis elegans Hypothetical
protein Y62E10A.1 protein.
Length = 110
Score = 77.0 bits (181), Expect = 2e-15
Identities = 38/65 (58%), Positives = 48/65 (73%)
Frame = +1
Query: 52 MRYVAAYLLAVLGGKASPAAADVEKILSSVGIEADSEKLKKVISELNGKNVEELIEAGRG 231
MRYV+AYLLAVLGG A+P D++ ILS+VG++AD+E K V+S L GK VEELI G
Sbjct: 1 MRYVSAYLLAVLGGNANPKVDDLKNILSAVGVDADAETAKLVVSRLAGKTVEELIAEGSA 60
Query: 232 KLSSM 246
L S+
Sbjct: 61 GLVSV 65
>U97194-7|AAB52450.2| 107|Caenorhabditis elegans Hypothetical
protein C37A2.7 protein.
Length = 107
Score = 70.1 bits (164), Expect = 2e-13
Identities = 32/65 (49%), Positives = 44/65 (67%)
Frame = +1
Query: 52 MRYVAAYLLAVLGGKASPAAADVEKILSSVGIEADSEKLKKVISELNGKNVEELIEAGRG 231
M+Y+ AYLLA LGG ASP+A DV K+L + G++ D E V+ L GK + E+I G+
Sbjct: 1 MKYLGAYLLATLGGNASPSAQDVLKVLEAGGLDCDMENANSVVDALKGKTISEVIAQGKV 60
Query: 232 KLSSM 246
KLSS+
Sbjct: 61 KLSSV 65
>AF016688-3|AAB66076.2| 674|Caenorhabditis elegans Hypothetical
protein F18A12.4 protein.
Length = 674
Score = 28.3 bits (60), Expect = 0.90
Identities = 19/71 (26%), Positives = 35/71 (49%)
Frame = +1
Query: 28 FRVLAT*KMRYVAAYLLAVLGGKASPAAADVEKILSSVGIEADSEKLKKVISELNGKNVE 207
FR+L K +A L +++ S + + +IL + G++ DSE++ K E + ++
Sbjct: 189 FRILTEGKFVRIAPTLGSIVHN--STMISMISEILEANGVQPDSEEISKEFEEYSSLQMK 246
Query: 208 ELIEAGRGKLS 240
GKLS
Sbjct: 247 LAKYQSSGKLS 257
>Z75712-1|CAB00040.1| 724|Caenorhabditis elegans Hypothetical
protein K04G2.3 protein.
Length = 724
Score = 27.9 bits (59), Expect = 1.2
Identities = 16/66 (24%), Positives = 34/66 (51%), Gaps = 1/66 (1%)
Frame = +1
Query: 52 MRYVAAYLLAVLGGKASPAAAD-VEKILSSVGIEADSEKLKKVISELNGKNVEELIEAGR 228
++Y ++ L LG + + +E +S++GI+ D ++ KV+S G ++ L +
Sbjct: 172 LQYNSSVDLKYLGQNVTVTPEEPIESKMSAMGIDDDKKRNSKVVSTAVGYKIQILNASAE 231
Query: 229 GKLSSM 246
G S +
Sbjct: 232 GSTSDV 237
>AF125459-7|AAD12836.1| 971|Caenorhabditis elegans Hypothetical
protein Y25C1A.5 protein.
Length = 971
Score = 27.9 bits (59), Expect = 1.2
Identities = 10/34 (29%), Positives = 22/34 (64%)
Frame = +1
Query: 115 DVEKILSSVGIEADSEKLKKVISELNGKNVEELI 216
D+ ++LSS G+E + L + ++ +NVE+++
Sbjct: 325 DILRVLSSPGLEVRKKTLSLALDLVSSRNVEDMV 358
>Z83228-10|CAB05732.2| 585|Caenorhabditis elegans Hypothetical
protein F52F12.1a protein.
Length = 585
Score = 26.6 bits (56), Expect = 2.7
Identities = 14/32 (43%), Positives = 24/32 (75%), Gaps = 3/32 (9%)
Frame = +1
Query: 136 SVGIEADSEKLKKVISELNGK---NVEELIEA 222
SVG AD++K K I+++NGK +V+EL+++
Sbjct: 297 SVGKWADAKKQLKKIAKMNGKSNVDVDELVDS 328
>Z83228-1|CAC70093.1| 568|Caenorhabditis elegans Hypothetical
protein F52F12.1b protein.
Length = 568
Score = 26.6 bits (56), Expect = 2.7
Identities = 14/32 (43%), Positives = 24/32 (75%), Gaps = 3/32 (9%)
Frame = +1
Query: 136 SVGIEADSEKLKKVISELNGK---NVEELIEA 222
SVG AD++K K I+++NGK +V+EL+++
Sbjct: 280 SVGKWADAKKQLKKIAKMNGKSNVDVDELVDS 311
>AF110415-1|AAF21932.1| 568|Caenorhabditis elegans organic cation
transporter 1 protein.
Length = 568
Score = 26.6 bits (56), Expect = 2.7
Identities = 14/32 (43%), Positives = 24/32 (75%), Gaps = 3/32 (9%)
Frame = +1
Query: 136 SVGIEADSEKLKKVISELNGK---NVEELIEA 222
SVG AD++K K I+++NGK +V+EL+++
Sbjct: 280 SVGKWADAKKQLKKIAKMNGKSNVDVDELVDS 311
>Z83107-10|CAB05505.1| 1963|Caenorhabditis elegans Hypothetical
protein F11C3.3 protein.
Length = 1963
Score = 26.2 bits (55), Expect = 3.6
Identities = 18/43 (41%), Positives = 23/43 (53%), Gaps = 4/43 (9%)
Frame = +1
Query: 94 KASPAAADVEKILSSVGIEADS----EKLKKVISELNGKNVEE 210
KA A ++EKI V DS EKL+K + E + K VEE
Sbjct: 850 KAGKEAEELEKINDKVKALEDSLAKEEKLRKELEESSAKLVEE 892
>Z81499-3|CAB04089.1| 1963|Caenorhabditis elegans Hypothetical
protein F11C3.3 protein.
Length = 1963
Score = 26.2 bits (55), Expect = 3.6
Identities = 18/43 (41%), Positives = 23/43 (53%), Gaps = 4/43 (9%)
Frame = +1
Query: 94 KASPAAADVEKILSSVGIEADS----EKLKKVISELNGKNVEE 210
KA A ++EKI V DS EKL+K + E + K VEE
Sbjct: 850 KAGKEAEELEKINDKVKALEDSLAKEEKLRKELEESSAKLVEE 892
>J01050-1|AAA28124.1| 1966|Caenorhabditis elegans myosin heavy chain
protein.
Length = 1966
Score = 26.2 bits (55), Expect = 3.6
Identities = 18/43 (41%), Positives = 23/43 (53%), Gaps = 4/43 (9%)
Frame = +1
Query: 94 KASPAAADVEKILSSVGIEADS----EKLKKVISELNGKNVEE 210
KA A ++EKI V DS EKL+K + E + K VEE
Sbjct: 853 KAGKEAEELEKINDKVKALEDSLAKEEKLRKELEESSAKLVEE 895
>AC025721-10|AAK29908.2| 1019|Caenorhabditis elegans Hypothetical
protein Y48G8AL.1 protein.
Length = 1019
Score = 26.2 bits (55), Expect = 3.6
Identities = 14/34 (41%), Positives = 20/34 (58%)
Frame = +1
Query: 145 IEADSEKLKKVISELNGKNVEELIEAGRGKLSSM 246
I+ D E LKK++ E + V LIE+ L+SM
Sbjct: 381 IKLDHESLKKLLDEGDALEVMSLIESVFSSLASM 414
>Z46935-10|CAA87054.1| 1244|Caenorhabditis elegans Hypothetical
protein M106.1 protein.
Length = 1244
Score = 25.8 bits (54), Expect = 4.8
Identities = 13/26 (50%), Positives = 16/26 (61%)
Frame = +1
Query: 145 IEADSEKLKKVISELNGKNVEELIEA 222
I D LKK I+ L+ K V+ELI A
Sbjct: 1023 ITEDFNMLKKTIATLDKKKVDELIRA 1048
>Z46794-13|CAA86786.1| 1244|Caenorhabditis elegans Hypothetical
protein M106.1 protein.
Length = 1244
Score = 25.8 bits (54), Expect = 4.8
Identities = 13/26 (50%), Positives = 16/26 (61%)
Frame = +1
Query: 145 IEADSEKLKKVISELNGKNVEELIEA 222
I D LKK I+ L+ K V+ELI A
Sbjct: 1023 ITEDFNMLKKTIATLDKKKVDELIRA 1048
>U96387-1|AAC47834.1| 1244|Caenorhabditis elegans mitotic chromosome
and X-chromosomeassociated MIX-1 protein protein.
Length = 1244
Score = 25.8 bits (54), Expect = 4.8
Identities = 13/26 (50%), Positives = 16/26 (61%)
Frame = +1
Query: 145 IEADSEKLKKVISELNGKNVEELIEA 222
I D LKK I+ L+ K V+ELI A
Sbjct: 1023 ITEDFNMLKKTIATLDKKKVDELIRA 1048
>AL031266-2|CAA20330.1| 1244|Caenorhabditis elegans Hypothetical
protein M106.1 protein.
Length = 1244
Score = 25.8 bits (54), Expect = 4.8
Identities = 13/26 (50%), Positives = 16/26 (61%)
Frame = +1
Query: 145 IEADSEKLKKVISELNGKNVEELIEA 222
I D LKK I+ L+ K V+ELI A
Sbjct: 1023 ITEDFNMLKKTIATLDKKKVDELIRA 1048
>Z77661-6|CAB01185.1| 192|Caenorhabditis elegans Hypothetical
protein F40G12.7 protein.
Length = 192
Score = 25.0 bits (52), Expect = 8.4
Identities = 16/41 (39%), Positives = 26/41 (63%), Gaps = 5/41 (12%)
Frame = +1
Query: 106 AAADVEKILSSVG----IEADSE-KLKKVISELNGKNVEEL 213
A D EK+ V ++ D+E KLKK+ ++LNG++ E+L
Sbjct: 22 ALQDNEKLTRDVSDAKLLKEDAEIKLKKIRNKLNGEHSEKL 62
>Z46996-1|CAA87099.1| 472|Caenorhabditis elegans Hypothetical
protein C34C12.1 protein.
Length = 472
Score = 25.0 bits (52), Expect = 8.4
Identities = 16/41 (39%), Positives = 26/41 (63%), Gaps = 5/41 (12%)
Frame = +1
Query: 106 AAADVEKILSSVG----IEADSE-KLKKVISELNGKNVEEL 213
A D EK+ V ++ D+E KLKK+ ++LNG++ E+L
Sbjct: 22 ALQDNEKLTRDVSDAKLLKEDAEIKLKKIRNKLNGEHSEKL 62
>U00049-1|AAC47053.2| 288|Caenorhabditis elegans Serpentine
receptor, class g (gamma)protein 1 protein.
Length = 288
Score = 25.0 bits (52), Expect = 8.4
Identities = 11/30 (36%), Positives = 12/30 (40%)
Frame = +2
Query: 53 CVTWPRIYSPCWAAKRPQLLLMSKRSSALW 142
CV WP YS W +L S LW
Sbjct: 133 CVLWPLSYSLFWKKWLKSILTTMAISPCLW 162
>AC024843-1|AAR12983.3| 193|Caenorhabditis elegans Hypothetical
protein Y61A9LA.12 protein.
Length = 193
Score = 25.0 bits (52), Expect = 8.4
Identities = 16/41 (39%), Positives = 26/41 (63%), Gaps = 5/41 (12%)
Frame = +1
Query: 106 AAADVEKILSSVG----IEADSE-KLKKVISELNGKNVEEL 213
A D EK+ V ++ D+E KLKK+ ++LNG++ E+L
Sbjct: 22 ALQDNEKLTRDVSDAKLLKEDAEIKLKKIRNKLNGEHSEKL 62
Database: celegans
Posted date: Oct 23, 2007 1:18 PM
Number of letters in database: 12,740,198
Number of sequences in database: 27,780
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 5,452,346
Number of Sequences: 27780
Number of extensions: 82430
Number of successful extensions: 285
Number of sequences better than 10.0: 20
Number of HSP's better than 10.0 without gapping: 281
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 285
length of database: 12,740,198
effective HSP length: 69
effective length of database: 10,823,378
effective search space used: 259761072
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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