Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= S06A01NCLL0023_J22
(283 letters)
Database: bee
438 sequences; 146,343 total letters
Searching......................................................done
Score E
Sequences producing significant alignments: (bits) Value
AF159569-1|AAF70859.1| 1124|Apis mellifera period clock protein ... 24 0.41
DQ058012-1|AAY57281.1| 373|Apis mellifera venom allergen acid p... 22 1.7
AY939855-1|AAX33235.1| 388|Apis mellifera venom acid phosphatas... 22 1.7
AF205594-1|AAQ13840.1| 156|Apis mellifera acid phosphatase prec... 22 1.7
AY217747-1|AAP45005.1| 246|Apis mellifera short-chain dehydroge... 21 2.2
EF625899-1|ABR45906.1| 1010|Apis mellifera high Glx storage prot... 21 2.9
AF498306-5|AAM19330.1| 456|Apis mellifera dopamine receptor typ... 20 5.0
AB269871-1|BAF03050.1| 1923|Apis mellifera cell adhesion molecul... 20 5.0
AB257298-1|BAE93381.1| 1919|Apis mellifera Dscam family member A... 20 5.0
AY937243-1|AAX33677.1| 1370|Apis mellifera Toll-like receptor pr... 20 6.7
AY569781-1|AAS75781.1| 461|Apis mellifera neuronal nicotinic ac... 20 6.7
AB204558-1|BAD89803.1| 1143|Apis mellifera nitric oxide synthase... 20 6.7
>AF159569-1|AAF70859.1| 1124|Apis mellifera period clock protein
protein.
Length = 1124
Score = 23.8 bits (49), Expect = 0.41
Identities = 9/28 (32%), Positives = 13/28 (46%)
Frame = -1
Query: 274 QRARRRHPPAWKRACRVRPQLTLQHFCH 191
Q +RR P W V P+L ++ H
Sbjct: 989 QYGKRRKEPPWLEGVHVTPELIYEYQIH 1016
>DQ058012-1|AAY57281.1| 373|Apis mellifera venom allergen acid
phosphatase protein.
Length = 373
Score = 21.8 bits (44), Expect = 1.7
Identities = 8/15 (53%), Positives = 11/15 (73%)
Frame = +1
Query: 160 EKLKKVISELNGKNV 204
+KLKK + E GKN+
Sbjct: 154 DKLKKKLEEWTGKNI 168
>AY939855-1|AAX33235.1| 388|Apis mellifera venom acid phosphatase
precursor protein.
Length = 388
Score = 21.8 bits (44), Expect = 1.7
Identities = 8/15 (53%), Positives = 11/15 (73%)
Frame = +1
Query: 160 EKLKKVISELNGKNV 204
+KLKK + E GKN+
Sbjct: 169 DKLKKKLEEWTGKNI 183
>AF205594-1|AAQ13840.1| 156|Apis mellifera acid phosphatase
precursor protein.
Length = 156
Score = 21.8 bits (44), Expect = 1.7
Identities = 8/15 (53%), Positives = 11/15 (73%)
Frame = +1
Query: 160 EKLKKVISELNGKNV 204
+KLKK + E GKN+
Sbjct: 57 DKLKKKLEEWTGKNI 71
>AY217747-1|AAP45005.1| 246|Apis mellifera short-chain
dehydrogenase/reductase protein.
Length = 246
Score = 21.4 bits (43), Expect = 2.2
Identities = 9/27 (33%), Positives = 15/27 (55%)
Frame = +1
Query: 118 VEKILSSVGIEADSEKLKKVISELNGK 198
V K + +GI +K+K ++ EL K
Sbjct: 28 VGKGMKVIGIAPQVDKMKTLVEELKSK 54
>EF625899-1|ABR45906.1| 1010|Apis mellifera high Glx storage protein
protein.
Length = 1010
Score = 21.0 bits (42), Expect = 2.9
Identities = 8/29 (27%), Positives = 16/29 (55%)
Frame = -2
Query: 114 SSSWGRFAAQHGE*IRGHVTHFLSR*DTK 28
+++W R G+ ++ V L+R DT+
Sbjct: 123 TAAWARVHVNEGQFLKAFVAAVLTRQDTQ 151
>AF498306-5|AAM19330.1| 456|Apis mellifera dopamine receptor type
D2 protein.
Length = 456
Score = 20.2 bits (40), Expect = 5.0
Identities = 7/13 (53%), Positives = 10/13 (76%)
Frame = -1
Query: 277 PQRARRRHPPAWK 239
P R RRR+ PA++
Sbjct: 410 PGRVRRRYQPAFR 422
>AB269871-1|BAF03050.1| 1923|Apis mellifera cell adhesion molecule
AbsCAM-Ig7B protein.
Length = 1923
Score = 20.2 bits (40), Expect = 5.0
Identities = 9/30 (30%), Positives = 13/30 (43%)
Frame = +2
Query: 182 PSSMAKMLKS*LRPDAASSLPCRRVAPPRP 271
P + ++ L+P A SL C P P
Sbjct: 422 PMLLYSFIEQTLQPGPAVSLKCSAAGNPTP 451
>AB257298-1|BAE93381.1| 1919|Apis mellifera Dscam family member
AbsCAM-Ig7A protein.
Length = 1919
Score = 20.2 bits (40), Expect = 5.0
Identities = 9/30 (30%), Positives = 13/30 (43%)
Frame = +2
Query: 182 PSSMAKMLKS*LRPDAASSLPCRRVAPPRP 271
P + ++ L+P A SL C P P
Sbjct: 422 PMLLYSFIEQTLQPGPAVSLKCSAAGNPTP 451
>AY937243-1|AAX33677.1| 1370|Apis mellifera Toll-like receptor
protein.
Length = 1370
Score = 19.8 bits (39), Expect = 6.7
Identities = 7/14 (50%), Positives = 10/14 (71%)
Frame = -2
Query: 210 LFNIFAIELGDNLL 169
L+N+ +EL DN L
Sbjct: 382 LYNLHTLELSDNKL 395
>AY569781-1|AAS75781.1| 461|Apis mellifera neuronal nicotinic
acetylcholine Apisa7-2 subunit protein.
Length = 461
Score = 19.8 bits (39), Expect = 6.7
Identities = 7/11 (63%), Positives = 8/11 (72%)
Frame = +3
Query: 168 KEGYLRAQWQK 200
KEG L AQW +
Sbjct: 382 KEGGLEAQWSR 392
>AB204558-1|BAD89803.1| 1143|Apis mellifera nitric oxide synthase
protein.
Length = 1143
Score = 19.8 bits (39), Expect = 6.7
Identities = 7/20 (35%), Positives = 14/20 (70%)
Frame = +1
Query: 145 IEADSEKLKKVISELNGKNV 204
IEA+ + + K +S+ + +NV
Sbjct: 697 IEAEPQPIGKALSKCHNRNV 716
Database: bee
Posted date: Oct 23, 2007 1:17 PM
Number of letters in database: 146,343
Number of sequences in database: 438
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 63,962
Number of Sequences: 438
Number of extensions: 951
Number of successful extensions: 12
Number of sequences better than 10.0: 12
Number of HSP's better than 10.0 without gapping: 12
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 12
length of database: 146,343
effective HSP length: 49
effective length of database: 124,881
effective search space used: 5494764
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 38 (20.3 bits)
- SilkBase 1999-2023 -