Samia BLAST Result against fruitfly

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= S06A01NCLL0023_J16
         (191 letters)

Database: fruitfly 
           53,049 sequences; 24,988,368 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

L13690-1|AAA28875.1|  246|Drosophila melanogaster ribosomal prot...    99   7e-22
BT024258-1|ABC86320.1|  253|Drosophila melanogaster IP15838p pro...    99   7e-22
AY118971-1|AAM50831.1|  246|Drosophila melanogaster LD47488p pro...    99   7e-22
AE014297-3319|AAF56129.1|  246|Drosophila melanogaster CG6779-PA...    99   7e-22
X72921-1|CAA51425.1|  246|Drosophila melanogaster ribosomal prot...    97   3e-21
AY060712-1|AAL28260.1|  280|Drosophila melanogaster GH15448p pro...    33   0.042
AF435962-1|AAL31972.1|  280|Drosophila melanogaster mitochondria...    33   0.042
AE013599-3422|AAF46869.1|  280|Drosophila melanogaster CG4207-PA...    33   0.042
BT030161-1|ABN49300.1|  326|Drosophila melanogaster IP17722p pro...    27   2.7  
AE014296-420|AAF47619.2| 1772|Drosophila melanogaster CG13809-PA...    26   6.3  

>L13690-1|AAA28875.1|  246|Drosophila melanogaster ribosomal protein
           S3/AP endonucleaseDNA repair protein protein.
          Length = 246

 Score = 99.1 bits (236), Expect = 7e-22
 Identities = 47/52 (90%), Positives = 50/52 (96%)
 Frame = +3

Query: 33  ISKKRKFVGDGVFKAELNEFLTRELAEDGYSGVEVRVTPIRSEIIIMATRTQ 188
           ISKKRKFV DG+FKAELNEFLTRELAEDGYSGVEVRVTP R+EIIIMAT+TQ
Sbjct: 7   ISKKRKFVSDGIFKAELNEFLTRELAEDGYSGVEVRVTPSRTEIIIMATKTQ 58


>BT024258-1|ABC86320.1|  253|Drosophila melanogaster IP15838p
           protein.
          Length = 253

 Score = 99.1 bits (236), Expect = 7e-22
 Identities = 47/52 (90%), Positives = 50/52 (96%)
 Frame = +3

Query: 33  ISKKRKFVGDGVFKAELNEFLTRELAEDGYSGVEVRVTPIRSEIIIMATRTQ 188
           ISKKRKFV DG+FKAELNEFLTRELAEDGYSGVEVRVTP R+EIIIMAT+TQ
Sbjct: 14  ISKKRKFVSDGIFKAELNEFLTRELAEDGYSGVEVRVTPSRTEIIIMATKTQ 65


>AY118971-1|AAM50831.1|  246|Drosophila melanogaster LD47488p
           protein.
          Length = 246

 Score = 99.1 bits (236), Expect = 7e-22
 Identities = 47/52 (90%), Positives = 50/52 (96%)
 Frame = +3

Query: 33  ISKKRKFVGDGVFKAELNEFLTRELAEDGYSGVEVRVTPIRSEIIIMATRTQ 188
           ISKKRKFV DG+FKAELNEFLTRELAEDGYSGVEVRVTP R+EIIIMAT+TQ
Sbjct: 7   ISKKRKFVSDGIFKAELNEFLTRELAEDGYSGVEVRVTPSRTEIIIMATKTQ 58


>AE014297-3319|AAF56129.1|  246|Drosophila melanogaster CG6779-PA
           protein.
          Length = 246

 Score = 99.1 bits (236), Expect = 7e-22
 Identities = 47/52 (90%), Positives = 50/52 (96%)
 Frame = +3

Query: 33  ISKKRKFVGDGVFKAELNEFLTRELAEDGYSGVEVRVTPIRSEIIIMATRTQ 188
           ISKKRKFV DG+FKAELNEFLTRELAEDGYSGVEVRVTP R+EIIIMAT+TQ
Sbjct: 7   ISKKRKFVSDGIFKAELNEFLTRELAEDGYSGVEVRVTPSRTEIIIMATKTQ 58


>X72921-1|CAA51425.1|  246|Drosophila melanogaster ribosomal protein
           S3 protein.
          Length = 246

 Score = 97.1 bits (231), Expect = 3e-21
 Identities = 46/52 (88%), Positives = 49/52 (94%)
 Frame = +3

Query: 33  ISKKRKFVGDGVFKAELNEFLTRELAEDGYSGVEVRVTPIRSEIIIMATRTQ 188
           ISKKRKFV DG+FKAELNEFLTRELAEDGYSGVEVRVTP  +EIIIMAT+TQ
Sbjct: 7   ISKKRKFVSDGIFKAELNEFLTRELAEDGYSGVEVRVTPFGTEIIIMATKTQ 58


>AY060712-1|AAL28260.1|  280|Drosophila melanogaster GH15448p
           protein.
          Length = 280

 Score = 33.5 bits (73), Expect = 0.042
 Identities = 15/33 (45%), Positives = 21/33 (63%)
 Frame = -1

Query: 101 PREELIELRLKNSITDEFSFFGNVRRHDYPRAE 3
           PR+++I++RLK  I     F   +RR DYPR E
Sbjct: 132 PRDKMIKVRLKELIDKRKKFLKYLRRWDYPRFE 164


>AF435962-1|AAL31972.1|  280|Drosophila melanogaster mitochondrial
           ribosomal proteinS15 protein.
          Length = 280

 Score = 33.5 bits (73), Expect = 0.042
 Identities = 15/33 (45%), Positives = 21/33 (63%)
 Frame = -1

Query: 101 PREELIELRLKNSITDEFSFFGNVRRHDYPRAE 3
           PR+++I++RLK  I     F   +RR DYPR E
Sbjct: 132 PRDKMIKVRLKELIDKRKKFLKYLRRWDYPRFE 164


>AE013599-3422|AAF46869.1|  280|Drosophila melanogaster CG4207-PA
           protein.
          Length = 280

 Score = 33.5 bits (73), Expect = 0.042
 Identities = 15/33 (45%), Positives = 21/33 (63%)
 Frame = -1

Query: 101 PREELIELRLKNSITDEFSFFGNVRRHDYPRAE 3
           PR+++I++RLK  I     F   +RR DYPR E
Sbjct: 132 PRDKMIKVRLKELIDKRKKFLKYLRRWDYPRFE 164


>BT030161-1|ABN49300.1|  326|Drosophila melanogaster IP17722p
           protein.
          Length = 326

 Score = 27.5 bits (58), Expect = 2.7
 Identities = 10/22 (45%), Positives = 14/22 (63%)
 Frame = +2

Query: 95  HEGAGRGWLLRCGGACHTHTFR 160
           + G G G+L+ CGGA  T T +
Sbjct: 192 YAGYGAGYLMNCGGALRTSTLQ 213


>AE014296-420|AAF47619.2| 1772|Drosophila melanogaster CG13809-PA
           protein.
          Length = 1772

 Score = 26.2 bits (55), Expect = 6.3
 Identities = 10/20 (50%), Positives = 12/20 (60%)
 Frame = +1

Query: 124 PVWRCVSHPYVQKSLLWPQG 183
           P+ R V HP    +L WPQG
Sbjct: 206 PLGRVVQHPVPPFALAWPQG 225


  Database: fruitfly
    Posted date:  Oct 23, 2007  1:17 PM
  Number of letters in database: 24,988,368
  Number of sequences in database:  53,049
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 9,049,554
Number of Sequences: 53049
Number of extensions: 162312
Number of successful extensions: 318
Number of sequences better than 10.0: 10
Number of HSP's better than 10.0 without gapping: 318
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 318
length of database: 24,988,368
effective HSP length: 43
effective length of database: 22,707,261
effective search space used: 454145220
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)