Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= S06A01NCLL0023_J15
(346 letters)
Database: rice
37,544 sequences; 14,793,348 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
03_01_0548 + 4099386-4099847,4100435-4101316 184 2e-47
03_01_0547 + 4093196-4093657,4094267-4095148 184 2e-47
03_01_0544 + 4082528-4082989,4083585-4084466 184 2e-47
03_01_0543 + 4076981-4077442,4078145-4079026 184 2e-47
02_03_0105 - 15254959-15255216,15256235-15256299,15257080-152572... 50 6e-07
04_03_0107 + 11328267-11328276,11329059-11329170,11329862-113299... 43 7e-05
02_04_0462 + 23131433-23132836 37 0.004
04_04_1015 - 30115377-30115477,30115570-30115615,30116491-301165... 33 0.079
04_04_1008 - 30054674-30054774,30054867-30054912,30055788-300558... 33 0.079
03_06_0699 - 35612919-35612989,35613079-35613319,35613506-356135... 31 0.32
11_06_0516 + 24502645-24504507 29 1.3
10_08_1038 - 22485394-22485960,22486712-22487197 28 1.7
09_02_0484 + 9804351-9805203,9806204-9806760,9807243-9807959 28 1.7
06_03_0116 + 16816970-16817209,16817328-16817461,16818716-16818749 28 1.7
01_01_0677 + 5201089-5201177,5201325-5202183,5202321-5202794 28 2.3
11_04_0242 - 15273774-15274043,15274131-15274235 27 3.0
04_04_0436 + 25186144-25187915,25188020-25188077,25188472-25188888 27 3.0
11_03_0079 + 9669666-9669728,9670779-9672545 27 3.9
12_02_1265 - 27435096-27437675 27 5.2
08_01_0851 + 8383043-8383301,8384654-8384824,8384907-8386420 27 5.2
02_01_0202 + 1366149-1366594,1368444-1368444,1368616-1368743,136... 27 5.2
03_05_0824 + 27980191-27980243,27980633-27980671,27980974-279820... 26 6.9
01_01_0672 + 5147916-5147976,5148087-5148166,5148329-5148973,514... 26 6.9
06_03_1020 - 26942839-26943105,26944273-26944486,26945017-26945051 26 9.1
>03_01_0548 + 4099386-4099847,4100435-4101316
Length = 447
Score = 184 bits (448), Expect = 2e-47
Identities = 81/112 (72%), Positives = 98/112 (87%)
Frame = +2
Query: 11 EVKSVEMHHEALQEAVPGDNVGFNVKNVSVKELRRGYVAGDSKNNPPRGAADFTAQVIVL 190
EVKSVEMHHEALQEA+PGDNVGFNVKNV+VK+L+RGYVA +SK++P + AA FT+QVI++
Sbjct: 276 EVKSVEMHHEALQEALPGDNVGFNVKNVAVKDLKRGYVASNSKDDPAKEAASFTSQVIIM 335
Query: 191 NHPGQISNGYTPVLDCHTAHIACKFAEIKEKVDRRTGKSTEDNPKSIKSGDA 346
NHPGQI NGY PVLDCHT+HIA KFAE+ K+DRR+GK E PK +K+GDA
Sbjct: 336 NHPGQIGNGYAPVLDCHTSHIAVKFAELVTKIDRRSGKELEKEPKFLKNGDA 387
>03_01_0547 + 4093196-4093657,4094267-4095148
Length = 447
Score = 184 bits (448), Expect = 2e-47
Identities = 81/112 (72%), Positives = 98/112 (87%)
Frame = +2
Query: 11 EVKSVEMHHEALQEAVPGDNVGFNVKNVSVKELRRGYVAGDSKNNPPRGAADFTAQVIVL 190
EVKSVEMHHEALQEA+PGDNVGFNVKNV+VK+L+RGYVA +SK++P + AA FT+QVI++
Sbjct: 276 EVKSVEMHHEALQEALPGDNVGFNVKNVAVKDLKRGYVASNSKDDPAKEAASFTSQVIIM 335
Query: 191 NHPGQISNGYTPVLDCHTAHIACKFAEIKEKVDRRTGKSTEDNPKSIKSGDA 346
NHPGQI NGY PVLDCHT+HIA KFAE+ K+DRR+GK E PK +K+GDA
Sbjct: 336 NHPGQIGNGYAPVLDCHTSHIAVKFAELVTKIDRRSGKELEKEPKFLKNGDA 387
>03_01_0544 + 4082528-4082989,4083585-4084466
Length = 447
Score = 184 bits (448), Expect = 2e-47
Identities = 81/112 (72%), Positives = 98/112 (87%)
Frame = +2
Query: 11 EVKSVEMHHEALQEAVPGDNVGFNVKNVSVKELRRGYVAGDSKNNPPRGAADFTAQVIVL 190
EVKSVEMHHEALQEA+PGDNVGFNVKNV+VK+L+RGYVA +SK++P + AA FT+QVI++
Sbjct: 276 EVKSVEMHHEALQEALPGDNVGFNVKNVAVKDLKRGYVASNSKDDPAKEAASFTSQVIIM 335
Query: 191 NHPGQISNGYTPVLDCHTAHIACKFAEIKEKVDRRTGKSTEDNPKSIKSGDA 346
NHPGQI NGY PVLDCHT+HIA KFAE+ K+DRR+GK E PK +K+GDA
Sbjct: 336 NHPGQIGNGYAPVLDCHTSHIAVKFAELVTKIDRRSGKELEKEPKFLKNGDA 387
>03_01_0543 + 4076981-4077442,4078145-4079026
Length = 447
Score = 184 bits (448), Expect = 2e-47
Identities = 81/112 (72%), Positives = 98/112 (87%)
Frame = +2
Query: 11 EVKSVEMHHEALQEAVPGDNVGFNVKNVSVKELRRGYVAGDSKNNPPRGAADFTAQVIVL 190
EVKSVEMHHEALQEA+PGDNVGFNVKNV+VK+L+RGYVA +SK++P + AA FT+QVI++
Sbjct: 276 EVKSVEMHHEALQEALPGDNVGFNVKNVAVKDLKRGYVASNSKDDPAKEAASFTSQVIIM 335
Query: 191 NHPGQISNGYTPVLDCHTAHIACKFAEIKEKVDRRTGKSTEDNPKSIKSGDA 346
NHPGQI NGY PVLDCHT+HIA KFAE+ K+DRR+GK E PK +K+GDA
Sbjct: 336 NHPGQIGNGYAPVLDCHTSHIAVKFAELVTKIDRRSGKELEKEPKFLKNGDA 387
>02_03_0105 -
15254959-15255216,15256235-15256299,15257080-15257215,
15257314-15257419,15257642-15257792,15258817-15258881,
15258980-15259134,15259219-15259281,15259846-15259917,
15260364-15260408
Length = 371
Score = 49.6 bits (113), Expect = 6e-07
Identities = 30/115 (26%), Positives = 55/115 (47%), Gaps = 4/115 (3%)
Frame = +2
Query: 2 HEAEVKSVEMH--HEALQEAVPGDNVGFNVKNVSVKELRRGYVAGDSKNNPPRGAADFTA 175
++A VK + +H + ++ A PG+NV + + ++ G+V K NP ++F A
Sbjct: 218 NKANVKVISVHCDEDRVRSAAPGENVRVKLSGIEEDDITAGFVLSSIK-NPVSAISEFRA 276
Query: 176 QVIVLN--HPGQISNGYTPVLDCHTAHIACKFAEIKEKVDRRTGKSTEDNPKSIK 334
Q+ +L + GY VL H+ C+ E+ E++D + K + K K
Sbjct: 277 QLQILELLDNAIFTAGYKAVLHIHSVVEECEIVELIEEIDLKRRKEGDIKKKKSK 331
>04_03_0107 +
11328267-11328276,11329059-11329170,11329862-11329907,
11330185-11330256,11332292-11332303,11332880-11332942,
11333038-11333192,11333303-11333367,11334645-11334795,
11335230-11335335,11335440-11335575,11336310-11336374,
11337003-11337188,11337298-11337399
Length = 426
Score = 42.7 bits (96), Expect = 7e-05
Identities = 27/110 (24%), Positives = 51/110 (46%), Gaps = 2/110 (1%)
Frame = +2
Query: 11 EVKSVEMHHEALQEAVPGDNVGFNVKNVSVKELRRGYVAGDSKNNPPRGAADFTAQVIVL 190
+V + + ++ A P +NV + + +++ G+V S NP +F AQ+ +L
Sbjct: 268 KVIGISLDEHKVRRAGPAENVRVKLSGIEDEDIMAGFVL-SSIGNPVGAVTEFNAQLQIL 326
Query: 191 N--HPGQISNGYTPVLDCHTAHIACKFAEIKEKVDRRTGKSTEDNPKSIK 334
+ GY VL H+ C+ ++ E++D + K E +PK K
Sbjct: 327 ELLDNAIFTAGYKAVLHIHSVVEECEIVDLIEEIDMK--KKKEADPKKKK 374
>02_04_0462 + 23131433-23132836
Length = 467
Score = 37.1 bits (82), Expect = 0.004
Identities = 24/95 (25%), Positives = 39/95 (41%), Gaps = 3/95 (3%)
Frame = +2
Query: 14 VKSVEMHHEALQEAVPGDNVGFNVKNVSVKELRRGYVAGDSKNNPPRGAADFTAQVIVLN 193
V VEM + + +A+ GDNVG ++ + ++ RG V + P D V+ +
Sbjct: 324 VTGVEMFQKTMDDAMAGDNVGLLLRGMQKDDIERGMVLAKPASITPHTKFDAVVYVLKKD 383
Query: 194 HPGQIS---NGYTPVLDCHTAHIACKFAEIKEKVD 289
G+ S GY P T + +I D
Sbjct: 384 EGGRHSPFFPGYRPQFYMRTTDVTGNVTKIMNDKD 418
>04_04_1015 -
30115377-30115477,30115570-30115615,30116491-30116590,
30116676-30116771,30119519-30119556,30119623-30119733,
30119820-30119951,30120024-30120263,30120532-30120700,
30120994-30121493,30121581-30121691,30121802-30122133,
30122603-30122737,30122839-30122988,30123809-30123947
Length = 799
Score = 32.7 bits (71), Expect = 0.079
Identities = 31/113 (27%), Positives = 52/113 (46%), Gaps = 3/113 (2%)
Frame = +2
Query: 8 AEVKSVEMHHEALQEAVPGDNVGFNVKNVSVKELRRGYVAGDSKNNP--PRGAADF-TAQ 178
A VKS+E + A GDNV +++ + +L + G NP P ++F +
Sbjct: 522 AAVKSIERDSNSCDIARAGDNVAVSLQGIDGSKL----ILGGILCNPGFPVPVSNFLELR 577
Query: 179 VIVLNHPGQISNGYTPVLDCHTAHIACKFAEIKEKVDRRTGKSTEDNPKSIKS 337
V+VL+ I GY H A + +I +D + GK ++ P+ +KS
Sbjct: 578 VLVLDVTIPILIGYQVEFHIHHVKEAARVTKIVALLD-KAGKPSKTAPRFLKS 629
>04_04_1008 -
30054674-30054774,30054867-30054912,30055788-30055887,
30055973-30056068,30058816-30058853,30058920-30059030,
30059117-30059248,30059321-30059560,30059829-30059997,
30060291-30060790,30060878-30060988,30061099-30061430,
30061900-30062034,30062136-30062285,30063106-30063244
Length = 799
Score = 32.7 bits (71), Expect = 0.079
Identities = 31/113 (27%), Positives = 52/113 (46%), Gaps = 3/113 (2%)
Frame = +2
Query: 8 AEVKSVEMHHEALQEAVPGDNVGFNVKNVSVKELRRGYVAGDSKNNP--PRGAADF-TAQ 178
A VKS+E + A GDNV +++ + +L + G NP P ++F +
Sbjct: 522 AAVKSIERDSNSCDIARAGDNVAVSLQGIDGSKL----ILGGILCNPGFPVPVSNFLELR 577
Query: 179 VIVLNHPGQISNGYTPVLDCHTAHIACKFAEIKEKVDRRTGKSTEDNPKSIKS 337
V+VL+ I GY H A + +I +D + GK ++ P+ +KS
Sbjct: 578 VLVLDVTIPILIGYQVEFHIHHVKEAARVTKIVALLD-KAGKPSKTAPRFLKS 629
>03_06_0699 -
35612919-35612989,35613079-35613319,35613506-35613568,
35613644-35613709,35614110-35614193,35614685-35614890,
35614977-35615067,35615176-35615280,35615552-35615626,
35615728-35615820,35615914-35615989,35616115-35616305
Length = 453
Score = 30.7 bits (66), Expect = 0.32
Identities = 26/89 (29%), Positives = 39/89 (43%), Gaps = 6/89 (6%)
Frame = +2
Query: 14 VKSVEMHHEALQEAVPGDNVGFNVKNVSVKELRRGYVAGDSKNNPPRGAADFTAQVIVL- 190
V VEM + L GDNVG ++ + +++RG V K + F A++ VL
Sbjct: 315 VTGVEMFKKILDHGEAGDNVGLLLRGLKRGDVQRGQVV--CKPGTVKTYQKFEAEIYVLT 372
Query: 191 -----NHPGQISNGYTPVLDCHTAHIACK 262
H +SN Y+P TA + K
Sbjct: 373 KDEGGRHTAFLSN-YSPQFYFRTADVTGK 400
>11_06_0516 + 24502645-24504507
Length = 620
Score = 28.7 bits (61), Expect = 1.3
Identities = 21/65 (32%), Positives = 29/65 (44%)
Frame = +2
Query: 23 VEMHHEALQEAVPGDNVGFNVKNVSVKELRRGYVAGDSKNNPPRGAADFTAQVIVLNHPG 202
VE HEAL AV D V S++E+ R GD + PP + V++ G
Sbjct: 114 VEQVHEALL-AVDAD---IEVIKASIREVYRFPCDGDERRGPPPPSTAPATGVVMTRRMG 169
Query: 203 QISNG 217
+I G
Sbjct: 170 EIRRG 174
>10_08_1038 - 22485394-22485960,22486712-22487197
Length = 350
Score = 28.3 bits (60), Expect = 1.7
Identities = 16/31 (51%), Positives = 18/31 (58%), Gaps = 2/31 (6%)
Frame = +1
Query: 172 SASHCAKS--PRSNIKRIHTCIGLPHSPHSL 258
S+S CA + P NI RIH IGL SP L
Sbjct: 96 SSSSCAAAAPPSPNILRIHAPIGLARSPAHL 126
>09_02_0484 + 9804351-9805203,9806204-9806760,9807243-9807959
Length = 708
Score = 28.3 bits (60), Expect = 1.7
Identities = 13/24 (54%), Positives = 19/24 (79%)
Frame = -2
Query: 345 ASPDLMDLGLSSVDLPVRRSTFSL 274
A+ DLM G+S V+LPVRR+ F++
Sbjct: 580 ATLDLMYSGISMVNLPVRRNHFAV 603
>06_03_0116 + 16816970-16817209,16817328-16817461,16818716-16818749
Length = 135
Score = 28.3 bits (60), Expect = 1.7
Identities = 17/50 (34%), Positives = 25/50 (50%)
Frame = +2
Query: 2 HEAEVKSVEMHHEALQEAVPGDNVGFNVKNVSVKELRRGYVAGDSKNNPP 151
H+ ++KS M E QEA D V F K+ K++ Y+ KN+ P
Sbjct: 57 HKIQIKSANMKEEMRQEAFDIDRVAFE-KHTMEKDIVE-YIKEFDKNHGP 104
>01_01_0677 + 5201089-5201177,5201325-5202183,5202321-5202794
Length = 473
Score = 27.9 bits (59), Expect = 2.3
Identities = 15/48 (31%), Positives = 21/48 (43%)
Frame = -2
Query: 180 TCAVKSAAPLGGLFFESPAT*PRRNSLTDTFLTLKPTLSPGTASCRAS 37
+ + A P G + RR L D+FL LK L PG+ + S
Sbjct: 274 SASAAEAPPSGNQLQHMISERKRREKLNDSFLALKAVLPPGSKKDKTS 321
>11_04_0242 - 15273774-15274043,15274131-15274235
Length = 124
Score = 27.5 bits (58), Expect = 3.0
Identities = 10/17 (58%), Positives = 11/17 (64%)
Frame = -3
Query: 266 QICRLCGLCGNPIQVCI 216
QIC +C CG P VCI
Sbjct: 74 QICAVCTCCGGPHGVCI 90
>04_04_0436 + 25186144-25187915,25188020-25188077,25188472-25188888
Length = 748
Score = 27.5 bits (58), Expect = 3.0
Identities = 13/37 (35%), Positives = 20/37 (54%)
Frame = +2
Query: 110 RRGYVAGDSKNNPPRGAADFTAQVIVLNHPGQISNGY 220
RRG +++ PR +A + QV+ HP +S GY
Sbjct: 175 RRGSNCVENRRRKPRSSAQSSPQVVTPRHP--VSEGY 209
>11_03_0079 + 9669666-9669728,9670779-9672545
Length = 609
Score = 27.1 bits (57), Expect = 3.9
Identities = 15/41 (36%), Positives = 24/41 (58%)
Frame = +2
Query: 167 FTAQVIVLNHPGQISNGYTPVLDCHTAHIACKFAEIKEKVD 289
FTA+ +H Q++N VLDC AH+ CK+ + E ++
Sbjct: 572 FTAENRSKSH--QVNN-VLAVLDCLQAHMECKYDMLTESLE 609
>12_02_1265 - 27435096-27437675
Length = 859
Score = 26.6 bits (56), Expect = 5.2
Identities = 20/74 (27%), Positives = 34/74 (45%), Gaps = 2/74 (2%)
Frame = +2
Query: 5 EAEVKSVEMHHE-ALQEAVPGDNVGFNVKNVSVKELRRGYV-AGDSKNNPPRGAADFTAQ 178
+A+ +++ H++ +L EA N N+ R GY + S + PP A+ +Q
Sbjct: 173 DAQPSNIKSHNQHSLPEAKMPYNPSVQ-NNLGKGVSRSGYAKSNQSFSGPPAMVANSPSQ 231
Query: 179 VIVLNHPGQISNGY 220
+ HPGQ Y
Sbjct: 232 IKNQRHPGQRHTNY 245
>08_01_0851 + 8383043-8383301,8384654-8384824,8384907-8386420
Length = 647
Score = 26.6 bits (56), Expect = 5.2
Identities = 14/41 (34%), Positives = 24/41 (58%)
Frame = +2
Query: 167 FTAQVIVLNHPGQISNGYTPVLDCHTAHIACKFAEIKEKVD 289
FTA+ +H Q++N +LDC AH+ CK+ + E ++
Sbjct: 610 FTAENRSKSH--QVNN-VLAILDCLQAHMECKYDMLTESLE 647
>02_01_0202 +
1366149-1366594,1368444-1368444,1368616-1368743,
1368943-1369039
Length = 223
Score = 26.6 bits (56), Expect = 5.2
Identities = 19/57 (33%), Positives = 26/57 (45%)
Frame = +2
Query: 62 GDNVGFNVKNVSVKELRRGYVAGDSKNNPPRGAADFTAQVIVLNHPGQISNGYTPVL 232
GD+ G V RR V GD + P + DF V++L H S+GY +L
Sbjct: 20 GDSGGGEAPAAEVLRRRRVPVPGDGLSPIPMFSVDFRLFVLILPH----SHGYLVLL 72
>03_05_0824 +
27980191-27980243,27980633-27980671,27980974-27982023,
27983097-27983262,27983439-27983549,27983637-27983688,
27984691-27984859,27985604-27985883
Length = 639
Score = 26.2 bits (55), Expect = 6.9
Identities = 11/25 (44%), Positives = 16/25 (64%)
Frame = +2
Query: 188 LNHPGQISNGYTPVLDCHTAHIACK 262
L+ P +ISNG TPV D ++ C+
Sbjct: 271 LHRPRRISNGTTPVFDDNSGSHLCQ 295
>01_01_0672 +
5147916-5147976,5148087-5148166,5148329-5148973,
5149111-5149341
Length = 338
Score = 26.2 bits (55), Expect = 6.9
Identities = 11/26 (42%), Positives = 15/26 (57%)
Frame = -2
Query: 114 RRNSLTDTFLTLKPTLSPGTASCRAS 37
RR L D+F+ LK L PG+ + S
Sbjct: 242 RREKLNDSFVALKAVLPPGSKKDKTS 267
>06_03_1020 - 26942839-26943105,26944273-26944486,26945017-26945051
Length = 171
Score = 25.8 bits (54), Expect = 9.1
Identities = 11/17 (64%), Positives = 12/17 (70%)
Frame = -2
Query: 189 STMTCAVKSAAPLGGLF 139
ST TC +KS APL G F
Sbjct: 51 STNTCTIKSEAPLKGPF 67
Database: rice
Posted date: Oct 4, 2007 10:57 AM
Number of letters in database: 14,793,348
Number of sequences in database: 37,544
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 10,377,815
Number of Sequences: 37544
Number of extensions: 215466
Number of successful extensions: 587
Number of sequences better than 10.0: 24
Number of HSP's better than 10.0 without gapping: 575
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 587
length of database: 14,793,348
effective HSP length: 73
effective length of database: 12,052,636
effective search space used: 494158076
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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