Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= S06A01NCLL0023_J15
(346 letters)
Database: bee
438 sequences; 146,343 total letters
Searching......................................................done
Score E
Sequences producing significant alignments: (bits) Value
AF015267-1|AAC38959.1| 461|Apis mellifera elongation factor-1al... 231 2e-63
X52884-1|CAA37066.1| 461|Apis mellifera elongation factor 1 alp... 229 7e-63
EF013227-1|ABK54581.1| 119|Apis mellifera elongation factor 1-a... 225 9e-62
AY208278-1|AAO48970.1| 274|Apis mellifera elongation factor 1-a... 95 3e-22
AY686596-1|AAT96374.1| 1946|Apis mellifera Dscam protein. 24 0.58
AY937243-1|AAX33677.1| 1370|Apis mellifera Toll-like receptor pr... 22 2.3
AY569709-1|AAS86662.1| 408|Apis mellifera complementary sex det... 22 2.3
DQ026032-1|AAY87891.1| 566|Apis mellifera nicotinic acetylcholi... 21 3.1
DQ288392-1|ABC41342.1| 120|Apis mellifera nanos protein. 21 4.1
AY569717-1|AAS86670.1| 397|Apis mellifera complementary sex det... 21 5.4
AY569712-1|AAS86665.1| 408|Apis mellifera complementary sex det... 21 5.4
AF388659-4|AAK71996.1| 1308|Apis mellifera NFRKB-like protein pr... 21 5.4
AB264313-1|BAF43600.1| 900|Apis mellifera ecdysone-induced prot... 21 5.4
DQ325132-1|ABD14146.1| 189|Apis mellifera complementary sex det... 20 7.2
DQ325131-1|ABD14145.1| 189|Apis mellifera complementary sex det... 20 7.2
AY569707-1|AAS86660.1| 408|Apis mellifera complementary sex det... 20 7.2
AB047034-1|BAB64310.1| 1598|Apis mellifera mblk-1 protein. 20 7.2
AY736135-1|AAU84701.1| 253|Apis mellifera take-out-like carrier... 20 9.5
>AF015267-1|AAC38959.1| 461|Apis mellifera elongation factor-1alpha
F2 protein.
Length = 461
Score = 231 bits (565), Expect = 2e-63
Identities = 106/112 (94%), Positives = 110/112 (98%)
Frame = +2
Query: 11 EVKSVEMHHEALQEAVPGDNVGFNVKNVSVKELRRGYVAGDSKNNPPRGAADFTAQVIVL 190
EVKSVEMHHEALQEAVPGDNVGFNVKNVSVKELRRGYVAGDSKNNPP+GAADFTAQVIVL
Sbjct: 288 EVKSVEMHHEALQEAVPGDNVGFNVKNVSVKELRRGYVAGDSKNNPPKGAADFTAQVIVL 347
Query: 191 NHPGQISNGYTPVLDCHTAHIACKFAEIKEKVDRRTGKSTEDNPKSIKSGDA 346
NHPGQISNGYTPVLDCHTAHIACKFA+IKEK DRR GK+TE+NPKSIKSGDA
Sbjct: 348 NHPGQISNGYTPVLDCHTAHIACKFADIKEKCDRRNGKTTEENPKSIKSGDA 399
>X52884-1|CAA37066.1| 461|Apis mellifera elongation factor 1 alpha
protein.
Length = 461
Score = 229 bits (560), Expect = 7e-63
Identities = 105/112 (93%), Positives = 109/112 (97%)
Frame = +2
Query: 11 EVKSVEMHHEALQEAVPGDNVGFNVKNVSVKELRRGYVAGDSKNNPPRGAADFTAQVIVL 190
EVKSVEMHHEAL EA+PGDNVGFNVKN+SVKELRRGYVAGDSKN PPRGAADFTAQVIVL
Sbjct: 288 EVKSVEMHHEALTEALPGDNVGFNVKNISVKELRRGYVAGDSKNQPPRGAADFTAQVIVL 347
Query: 191 NHPGQISNGYTPVLDCHTAHIACKFAEIKEKVDRRTGKSTEDNPKSIKSGDA 346
NHPGQISNGYTPVLDCHTAHIACKFAEIKEK DRRTGK+TE+NPKSIKSGDA
Sbjct: 348 NHPGQISNGYTPVLDCHTAHIACKFAEIKEKCDRRTGKTTEENPKSIKSGDA 399
>EF013227-1|ABK54581.1| 119|Apis mellifera elongation factor
1-alpha protein.
Length = 119
Score = 225 bits (551), Expect = 9e-62
Identities = 103/110 (93%), Positives = 107/110 (97%)
Frame = +2
Query: 17 KSVEMHHEALQEAVPGDNVGFNVKNVSVKELRRGYVAGDSKNNPPRGAADFTAQVIVLNH 196
KSVEMHHEAL EA+PGDNVGFNVKN+SVKELRRGYVAGDSKN PPRGAADFTAQVIVLNH
Sbjct: 1 KSVEMHHEALTEALPGDNVGFNVKNISVKELRRGYVAGDSKNQPPRGAADFTAQVIVLNH 60
Query: 197 PGQISNGYTPVLDCHTAHIACKFAEIKEKVDRRTGKSTEDNPKSIKSGDA 346
PGQISNGYTPVLDCHTAHIACKFAEIKEK DRRTGK+TE+NPKSIKSGDA
Sbjct: 61 PGQISNGYTPVLDCHTAHIACKFAEIKEKCDRRTGKTTEENPKSIKSGDA 110
>AY208278-1|AAO48970.1| 274|Apis mellifera elongation factor
1-alpha protein.
Length = 274
Score = 94.7 bits (225), Expect = 3e-22
Identities = 44/44 (100%), Positives = 44/44 (100%)
Frame = +2
Query: 11 EVKSVEMHHEALQEAVPGDNVGFNVKNVSVKELRRGYVAGDSKN 142
EVKSVEMHHEALQEAVPGDNVGFNVKNVSVKELRRGYVAGDSKN
Sbjct: 231 EVKSVEMHHEALQEAVPGDNVGFNVKNVSVKELRRGYVAGDSKN 274
>AY686596-1|AAT96374.1| 1946|Apis mellifera Dscam protein.
Length = 1946
Score = 23.8 bits (49), Expect = 0.58
Identities = 12/37 (32%), Positives = 17/37 (45%)
Frame = +1
Query: 139 KQPTQGSCRLHSASHCAKSPRSNIKRIHTCIGLPHSP 249
K TQ S + + + P S +R HT G+P P
Sbjct: 1048 KTYTQYSVVVQAFNKVGSGPMSEERRQHTAEGVPEQP 1084
>AY937243-1|AAX33677.1| 1370|Apis mellifera Toll-like receptor
protein.
Length = 1370
Score = 21.8 bits (44), Expect = 2.3
Identities = 11/36 (30%), Positives = 20/36 (55%)
Frame = +2
Query: 95 SVKELRRGYVAGDSKNNPPRGAADFTAQVIVLNHPG 202
S ++LR ++A + + P+G Q++VLN G
Sbjct: 283 STRDLREIHLAYNGLRDLPKGIFTRLEQLLVLNLAG 318
Score = 19.8 bits (39), Expect = 9.5
Identities = 6/16 (37%), Positives = 10/16 (62%)
Frame = +3
Query: 9 LKSSPWKCTTRLYKKL 56
L S+PW C + ++L
Sbjct: 921 LGSNPWSCRCKFLQEL 936
>AY569709-1|AAS86662.1| 408|Apis mellifera complementary sex
determiner protein.
Length = 408
Score = 21.8 bits (44), Expect = 2.3
Identities = 8/21 (38%), Positives = 14/21 (66%)
Frame = +3
Query: 282 KSTVVLVNQQRTTLNPLNLVM 344
KST V +R T+NP ++++
Sbjct: 142 KSTTTTVEVKRDTINPEDVIL 162
>DQ026032-1|AAY87891.1| 566|Apis mellifera nicotinic acetylcholine
receptor alpha3subunit protein.
Length = 566
Score = 21.4 bits (43), Expect = 3.1
Identities = 11/41 (26%), Positives = 18/41 (43%)
Frame = +3
Query: 66 TMLVSTSKTYLSRNCAVVTLQEIRKTTHPGELQTSQRKSLC 188
++ V TS + L + + + R HP EL+ S C
Sbjct: 402 SLFVETSASELVESSVLFPSLDSRDELHPRELEAVNLGSAC 442
>DQ288392-1|ABC41342.1| 120|Apis mellifera nanos protein.
Length = 120
Score = 21.0 bits (42), Expect = 4.1
Identities = 10/27 (37%), Positives = 15/27 (55%), Gaps = 2/27 (7%)
Frame = -3
Query: 308 LIYQYDGRLSL*FRQI--CRLCGLCGN 234
L+ DGR+S + C +CG CG+
Sbjct: 57 LLKDADGRVSCPVLRAYTCPICGACGD 83
>AY569717-1|AAS86670.1| 397|Apis mellifera complementary sex
determiner protein.
Length = 397
Score = 20.6 bits (41), Expect = 5.4
Identities = 7/21 (33%), Positives = 14/21 (66%)
Frame = +3
Query: 282 KSTVVLVNQQRTTLNPLNLVM 344
KST+ V +R +NP ++++
Sbjct: 131 KSTITTVEVKRDIINPEDVIL 151
>AY569712-1|AAS86665.1| 408|Apis mellifera complementary sex
determiner protein.
Length = 408
Score = 20.6 bits (41), Expect = 5.4
Identities = 7/21 (33%), Positives = 14/21 (66%)
Frame = +3
Query: 282 KSTVVLVNQQRTTLNPLNLVM 344
KST+ V +R +NP ++++
Sbjct: 142 KSTITTVEVKRDIINPEDVIL 162
>AF388659-4|AAK71996.1| 1308|Apis mellifera NFRKB-like protein
protein.
Length = 1308
Score = 20.6 bits (41), Expect = 5.4
Identities = 12/45 (26%), Positives = 20/45 (44%)
Frame = +1
Query: 154 GSCRLHSASHCAKSPRSNIKRIHTCIGLPHSPHSLQICRNQRESR 288
G LHSA S SN+ + T + P +Q + ++S+
Sbjct: 938 GHSVLHSAQSVVASSASNVTNVTTNLTTILPPVKVQSQQQSQQSQ 982
>AB264313-1|BAF43600.1| 900|Apis mellifera ecdysone-induced protein
75 protein.
Length = 900
Score = 20.6 bits (41), Expect = 5.4
Identities = 10/21 (47%), Positives = 11/21 (52%)
Frame = +1
Query: 142 QPTQGSCRLHSASHCAKSPRS 204
Q TQ LH S A+SP S
Sbjct: 665 QHTQSQLHLHLTSPPARSPSS 685
>DQ325132-1|ABD14146.1| 189|Apis mellifera complementary sex
determiner protein.
Length = 189
Score = 20.2 bits (40), Expect = 7.2
Identities = 9/21 (42%), Positives = 11/21 (52%)
Frame = +2
Query: 275 KEKVDRRTGKSTEDNPKSIKS 337
KE+ RT + T PK I S
Sbjct: 64 KERSQDRTERETSKEPKIISS 84
>DQ325131-1|ABD14145.1| 189|Apis mellifera complementary sex
determiner protein.
Length = 189
Score = 20.2 bits (40), Expect = 7.2
Identities = 9/21 (42%), Positives = 11/21 (52%)
Frame = +2
Query: 275 KEKVDRRTGKSTEDNPKSIKS 337
KE+ RT + T PK I S
Sbjct: 64 KERSQDRTERETSKEPKIISS 84
>AY569707-1|AAS86660.1| 408|Apis mellifera complementary sex
determiner protein.
Length = 408
Score = 20.2 bits (40), Expect = 7.2
Identities = 7/21 (33%), Positives = 13/21 (61%)
Frame = +3
Query: 282 KSTVVLVNQQRTTLNPLNLVM 344
KST +R T+NP ++++
Sbjct: 142 KSTTTTAEVKRDTINPEDVIL 162
>AB047034-1|BAB64310.1| 1598|Apis mellifera mblk-1 protein.
Length = 1598
Score = 20.2 bits (40), Expect = 7.2
Identities = 13/55 (23%), Positives = 22/55 (40%)
Frame = +1
Query: 130 RFEKQPTQGSCRLHSASHCAKSPRSNIKRIHTCIGLPHSPHSLQICRNQRESRPS 294
+ K P S ++ S S N+ R G+P ++ RNQ++ S
Sbjct: 1261 QMSKVPRDVSEGIYDGSGANGSFLDNLIRSSLETGIPRDQRAMTEARNQQQQASS 1315
>AY736135-1|AAU84701.1| 253|Apis mellifera take-out-like carrier
protein JHBP-1 protein.
Length = 253
Score = 19.8 bits (39), Expect = 9.5
Identities = 8/19 (42%), Positives = 9/19 (47%)
Frame = -1
Query: 187 HNDLRCEVCSSPGWVVFRI 131
HND+ CE G RI
Sbjct: 158 HNDIYCEKYEKNGETYLRI 176
Database: bee
Posted date: Oct 23, 2007 1:17 PM
Number of letters in database: 146,343
Number of sequences in database: 438
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 103,710
Number of Sequences: 438
Number of extensions: 2271
Number of successful extensions: 19
Number of sequences better than 10.0: 18
Number of HSP's better than 10.0 without gapping: 18
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 19
length of database: 146,343
effective HSP length: 51
effective length of database: 124,005
effective search space used: 7812315
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 39 (20.8 bits)
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