Samia BLAST Result against human

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= S06A01NCLL0023_J14
         (335 letters)

Database: human 
           237,096 sequences; 76,859,062 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

X57435-1|CAA40683.1|  321|Homo sapiens transcription factor AP-4...    28   6.2  
S73885-1|AAB32235.1|  338|Homo sapiens AP-4 protein.                   28   6.2  
CR541726-1|CAG46527.1|  338|Homo sapiens TFAP4 protein.                28   6.2  
BC010576-1|AAH10576.1|  338|Homo sapiens transcription factor AP...    28   6.2  
BC010441-1|AAH10441.1|  356|Homo sapiens carbohydrate sulfotrans...    28   6.2  
AF070594-1|AAC28651.1|  356|Homo sapiens HNK-1 sulfotransferase ...    28   6.2  
AF033827-1|AAC04707.1|  356|Homo sapiens HNK-1 sulfotransferase ...    28   6.2  
AC012493-1|AAX93044.1|  356|Homo sapiens unknown protein.              28   6.2  
BC064981-1|AAH64981.1|  951|Homo sapiens coiled-coil and C2 doma...    28   8.2  
AK000248-1|BAA91029.1|  467|Homo sapiens protein ( Homo sapiens ...    28   8.2  
AF536205-1|AAN04488.1|  950|Homo sapiens hypothetical protein pr...    28   8.2  
AB097002-1|BAC77355.1|  951|Homo sapiens putative NFkB activatin...    28   8.2  

>X57435-1|CAA40683.1|  321|Homo sapiens transcription factor AP-4
           protein.
          Length = 321

 Score = 28.3 bits (60), Expect = 6.2
 Identities = 16/47 (34%), Positives = 26/47 (55%)
 Frame = -1

Query: 332 IQSQTRAVVLL*FEEQSMESVELQPLEVLAPHAPEYYQKLVVPPFPP 192
           +Q Q   V LL  E+   E  +L+  ++L P AP ++  ++VP  PP
Sbjct: 180 LQQQQEQVRLLHQEKLEREQQQLRT-QLLPPPAPTHHPTVIVPAPPP 225


>S73885-1|AAB32235.1|  338|Homo sapiens AP-4 protein.
          Length = 338

 Score = 28.3 bits (60), Expect = 6.2
 Identities = 16/47 (34%), Positives = 26/47 (55%)
 Frame = -1

Query: 332 IQSQTRAVVLL*FEEQSMESVELQPLEVLAPHAPEYYQKLVVPPFPP 192
           +Q Q   V LL  E+   E  +L+  ++L P AP ++  ++VP  PP
Sbjct: 197 LQQQQEQVRLLHQEKLEREQQQLRT-QLLPPPAPTHHPTVIVPAPPP 242


>CR541726-1|CAG46527.1|  338|Homo sapiens TFAP4 protein.
          Length = 338

 Score = 28.3 bits (60), Expect = 6.2
 Identities = 16/47 (34%), Positives = 26/47 (55%)
 Frame = -1

Query: 332 IQSQTRAVVLL*FEEQSMESVELQPLEVLAPHAPEYYQKLVVPPFPP 192
           +Q Q   V LL  E+   E  +L+  ++L P AP ++  ++VP  PP
Sbjct: 197 LQQQQEQVRLLHQEKLEREQQQLRT-QLLPPPAPTHHPTVIVPAPPP 242


>BC010576-1|AAH10576.1|  338|Homo sapiens transcription factor AP-4
           (activating enhancer binding protein 4) protein.
          Length = 338

 Score = 28.3 bits (60), Expect = 6.2
 Identities = 16/47 (34%), Positives = 26/47 (55%)
 Frame = -1

Query: 332 IQSQTRAVVLL*FEEQSMESVELQPLEVLAPHAPEYYQKLVVPPFPP 192
           +Q Q   V LL  E+   E  +L+  ++L P AP ++  ++VP  PP
Sbjct: 197 LQQQQEQVRLLHQEKLEREQQQLRT-QLLPPPAPTHHPTVIVPAPPP 242


>BC010441-1|AAH10441.1|  356|Homo sapiens carbohydrate
           sulfotransferase 10 protein.
          Length = 356

 Score = 28.3 bits (60), Expect = 6.2
 Identities = 16/46 (34%), Positives = 25/46 (54%), Gaps = 4/46 (8%)
 Frame = +2

Query: 158 TCKQENIFSNWLEEKVELPIFDNIPERVEPT----PQVVVAQPIPY 283
           + KQE +F   + E  +LP   +IPE ++PT    P   + QP+ Y
Sbjct: 36  SAKQEFLFLTTMPEVRKLPEEKHIPEELKPTGKELPDSQLVQPLVY 81


>AF070594-1|AAC28651.1|  356|Homo sapiens HNK-1 sulfotransferase
           protein.
          Length = 356

 Score = 28.3 bits (60), Expect = 6.2
 Identities = 16/46 (34%), Positives = 25/46 (54%), Gaps = 4/46 (8%)
 Frame = +2

Query: 158 TCKQENIFSNWLEEKVELPIFDNIPERVEPT----PQVVVAQPIPY 283
           + KQE +F   + E  +LP   +IPE ++PT    P   + QP+ Y
Sbjct: 36  SAKQEFLFLTTMPEVRKLPEEKHIPEELKPTGKELPDSQLVQPLVY 81


>AF033827-1|AAC04707.1|  356|Homo sapiens HNK-1 sulfotransferase
           protein.
          Length = 356

 Score = 28.3 bits (60), Expect = 6.2
 Identities = 16/46 (34%), Positives = 25/46 (54%), Gaps = 4/46 (8%)
 Frame = +2

Query: 158 TCKQENIFSNWLEEKVELPIFDNIPERVEPT----PQVVVAQPIPY 283
           + KQE +F   + E  +LP   +IPE ++PT    P   + QP+ Y
Sbjct: 36  SAKQEFLFLTTMPEVRKLPEEKHIPEELKPTGKELPDSQLVQPLVY 81


>AC012493-1|AAX93044.1|  356|Homo sapiens unknown protein.
          Length = 356

 Score = 28.3 bits (60), Expect = 6.2
 Identities = 16/46 (34%), Positives = 25/46 (54%), Gaps = 4/46 (8%)
 Frame = +2

Query: 158 TCKQENIFSNWLEEKVELPIFDNIPERVEPT----PQVVVAQPIPY 283
           + KQE +F   + E  +LP   +IPE ++PT    P   + QP+ Y
Sbjct: 36  SAKQEFLFLTTMPEVRKLPEEKHIPEELKPTGKELPDSQLVQPLVY 81


>BC064981-1|AAH64981.1|  951|Homo sapiens coiled-coil and C2 domain
           containing 1A protein.
          Length = 951

 Score = 27.9 bits (59), Expect = 8.2
 Identities = 15/38 (39%), Positives = 21/38 (55%), Gaps = 1/38 (2%)
 Frame = +2

Query: 197 EKVELPIFDNIPERVEPTPQVVVAQP-IPYSAPQTTEV 307
           E V+L      P+++ P P    +QP  P +AP TTEV
Sbjct: 304 EPVDLSCLPPPPDQLPPDPPSPPSQPPTPATAPSTTEV 341


>AK000248-1|BAA91029.1|  467|Homo sapiens protein ( Homo sapiens
           cDNA FLJ20241 fis, clone COLF6335. ).
          Length = 467

 Score = 27.9 bits (59), Expect = 8.2
 Identities = 15/38 (39%), Positives = 21/38 (55%), Gaps = 1/38 (2%)
 Frame = +2

Query: 197 EKVELPIFDNIPERVEPTPQVVVAQP-IPYSAPQTTEV 307
           E V+L      P+++ P P    +QP  P +AP TTEV
Sbjct: 154 EPVDLSCLPPPPDQLPPDPPSPPSQPPTPATAPSTTEV 191


>AF536205-1|AAN04488.1|  950|Homo sapiens hypothetical protein
           protein.
          Length = 950

 Score = 27.9 bits (59), Expect = 8.2
 Identities = 15/38 (39%), Positives = 21/38 (55%), Gaps = 1/38 (2%)
 Frame = +2

Query: 197 EKVELPIFDNIPERVEPTPQVVVAQP-IPYSAPQTTEV 307
           E V+L      P+++ P P    +QP  P +AP TTEV
Sbjct: 304 EPVDLSCLPPPPDQLPPDPPSPPSQPPTPATAPSTTEV 341


>AB097002-1|BAC77355.1|  951|Homo sapiens putative NFkB activating
           protein protein.
          Length = 951

 Score = 27.9 bits (59), Expect = 8.2
 Identities = 15/38 (39%), Positives = 21/38 (55%), Gaps = 1/38 (2%)
 Frame = +2

Query: 197 EKVELPIFDNIPERVEPTPQVVVAQP-IPYSAPQTTEV 307
           E V+L      P+++ P P    +QP  P +AP TTEV
Sbjct: 304 EPVDLSCLPPPPDQLPPDPPSPPSQPPTPATAPSTTEV 341


  Database: human
    Posted date:  Oct 23, 2007  1:18 PM
  Number of letters in database: 76,859,062
  Number of sequences in database:  237,096
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 46,056,186
Number of Sequences: 237096
Number of extensions: 927736
Number of successful extensions: 2640
Number of sequences better than 10.0: 12
Number of HSP's better than 10.0 without gapping: 2574
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 2638
length of database: 76,859,062
effective HSP length: 80
effective length of database: 57,891,382
effective search space used: 1794632842
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)