Samia BLAST Result against bee

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= S06A01NCLL0023_J14
         (335 letters)

Database: bee 
           438 sequences; 146,343 total letters

Searching......................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

DQ058012-1|AAY57281.1|  373|Apis mellifera venom allergen acid p...    27   0.080
AY939855-1|AAX33235.1|  388|Apis mellifera venom acid phosphatas...    27   0.080
DQ667193-1|ABG75745.1|  510|Apis mellifera cys-loop ligand-gated...    26   0.11 
DQ151547-1|ABA39280.1|  405|Apis mellifera tyramine receptor pro...    21   5.3  
AJ968562-1|CAI91546.1|  998|Apis mellifera protein ( Apis mellif...    20   9.2  

>DQ058012-1|AAY57281.1|  373|Apis mellifera venom allergen acid
           phosphatase protein.
          Length = 373

 Score = 26.6 bits (56), Expect = 0.080
 Identities = 13/41 (31%), Positives = 22/41 (53%)
 Frame = -1

Query: 329 QSQTRAVVLL*FEEQSMESVELQPLEVLAPHAPEYYQKLVV 207
           Q + R + L    E ++ SV L  L++  PH PEY   +++
Sbjct: 245 QKKKRKIYLFSGHESNIASV-LHALQLYYPHVPEYSSSIIM 284


>AY939855-1|AAX33235.1|  388|Apis mellifera venom acid phosphatase
           precursor protein.
          Length = 388

 Score = 26.6 bits (56), Expect = 0.080
 Identities = 13/41 (31%), Positives = 22/41 (53%)
 Frame = -1

Query: 329 QSQTRAVVLL*FEEQSMESVELQPLEVLAPHAPEYYQKLVV 207
           Q + R + L    E ++ SV L  L++  PH PEY   +++
Sbjct: 260 QKKKRKIYLFSGHESNIASV-LHALQLYYPHVPEYSSSIIM 299


>DQ667193-1|ABG75745.1|  510|Apis mellifera cys-loop ligand-gated
           ion channel subunit protein.
          Length = 510

 Score = 26.2 bits (55), Expect = 0.11
 Identities = 13/36 (36%), Positives = 21/36 (58%), Gaps = 2/36 (5%)
 Frame = -2

Query: 133 VREISTVRLDLRAVMVXVQ--AKLNWFVVQAIIYCI 32
           V  +ST+ LD R  +  V+    L+WF++ +  YCI
Sbjct: 284 VLTLSTISLDSRTDLPKVRYATALDWFLLMSFGYCI 319


>DQ151547-1|ABA39280.1|  405|Apis mellifera tyramine receptor
           protein.
          Length = 405

 Score = 20.6 bits (41), Expect = 5.3
 Identities = 5/14 (35%), Positives = 11/14 (78%)
 Frame = +3

Query: 159 PANKRIFSPIGWRK 200
           P+N+++ +P  W+K
Sbjct: 387 PSNRKLPAPANWKK 400


>AJ968562-1|CAI91546.1|  998|Apis mellifera protein ( Apis mellifera
           ORF for hypotheticalprotein. ).
          Length = 998

 Score = 19.8 bits (39), Expect = 9.2
 Identities = 8/21 (38%), Positives = 16/21 (76%)
 Frame = -3

Query: 234 SGILSKIGSSTFSSSQLEKIF 172
           +G  S +  ++FSS++LEK++
Sbjct: 16  AGRPSNLLRTSFSSAKLEKLY 36


  Database: bee
    Posted date:  Oct 23, 2007  1:17 PM
  Number of letters in database: 146,343
  Number of sequences in database:  438
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 90,100
Number of Sequences: 438
Number of extensions: 1656
Number of successful extensions: 5
Number of sequences better than 10.0: 5
Number of HSP's better than 10.0 without gapping: 5
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 5
length of database: 146,343
effective HSP length: 50
effective length of database: 124,443
effective search space used:  7591023
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 39 (20.8 bits)