Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= S06A01NCLL0023_J13
(247 letters)
Database: fruitfly
53,049 sequences; 24,988,368 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
BT011339-1|AAR96131.1| 465|Drosophila melanogaster RH62603p pro... 154 1e-38
AF016835-1|AAC26144.1| 416|Drosophila melanogaster ribosomal pr... 152 7e-38
AE014297-1263|AAF54612.2| 161|Drosophila melanogaster CG4863-PD... 152 7e-38
AE014297-1262|AAF54610.2| 416|Drosophila melanogaster CG4863-PA... 152 7e-38
AE014297-1266|AAF54611.1| 125|Drosophila melanogaster CG4863-PC... 123 3e-29
AE014297-1265|AAF54609.1| 403|Drosophila melanogaster CG4863-PE... 123 3e-29
AE014297-1264|AAN13496.1| 403|Drosophila melanogaster CG4863-PB... 123 3e-29
BT024960-1|ABE01190.1| 458|Drosophila melanogaster IP15509p pro... 27 2.6
AE014298-1519|AAF47971.2| 458|Drosophila melanogaster CG1637-PB... 27 2.6
AE014134-2707|AAN10938.1| 2282|Drosophila melanogaster CG31817-P... 27 2.6
AY069180-1|AAL39325.1| 1263|Drosophila melanogaster GH22734p pro... 27 3.5
AY058401-1|AAL13630.1| 922|Drosophila melanogaster GH16858p pro... 27 3.5
AE013599-1186|AAF58740.2| 1462|Drosophila melanogaster CG30015-P... 27 3.5
AE013599-1185|AAF58741.2| 1462|Drosophila melanogaster CG30015-P... 27 3.5
BT024266-1|ABC86328.1| 95|Drosophila melanogaster IP15731p pro... 26 6.1
BT024245-1|ABC86307.1| 161|Drosophila melanogaster IP15931p pro... 26 6.1
AE014296-404|AAN11510.1| 202|Drosophila melanogaster CG32308-PB... 26 6.1
AE014296-403|AAN11509.1| 183|Drosophila melanogaster CG32308-PA... 26 6.1
BT004903-1|AAO47881.1| 799|Drosophila melanogaster LD02989p pro... 26 8.0
AF045771-1|AAC02621.1| 830|Drosophila melanogaster miranda prot... 26 8.0
AE014297-2738|AAF55723.2| 829|Drosophila melanogaster CG12249-P... 26 8.0
AE014297-2737|AAN13815.1| 799|Drosophila melanogaster CG12249-P... 26 8.0
AB005661-1|BAA24111.1| 830|Drosophila melanogaster Miranda prot... 26 8.0
>BT011339-1|AAR96131.1| 465|Drosophila melanogaster RH62603p
protein.
Length = 465
Score = 154 bits (374), Expect = 1e-38
Identities = 71/82 (86%), Positives = 75/82 (91%), Gaps = 1/82 (1%)
Frame = +3
Query: 3 TRLSKS-MSHRKFSAPRHGSMGFYPKKRSRRHRGKVKAFPKDDPSKPVHLTAFIGYKAGM 179
TRL ++ MSHRKFSAPRHGSM FYPKKRS RHRGKVKAFPKDD SKPVHLT FIGYKAGM
Sbjct: 5 TRLKRTDMSHRKFSAPRHGSMAFYPKKRSARHRGKVKAFPKDDASKPVHLTCFIGYKAGM 64
Query: 180 THVVREPDRPGSKINKKEIVEA 245
TH+VRE DRPGSKINKKE+VEA
Sbjct: 65 THIVREADRPGSKINKKEVVEA 86
>AF016835-1|AAC26144.1| 416|Drosophila melanogaster ribosomal
protein L3 protein.
Length = 416
Score = 152 bits (368), Expect = 7e-38
Identities = 68/75 (90%), Positives = 70/75 (93%)
Frame = +3
Query: 21 MSHRKFSAPRHGSMGFYPKKRSRRHRGKVKAFPKDDPSKPVHLTAFIGYKAGMTHVVREP 200
MSHRKFSAPRHGSM FYPKKRS RHRGKVKAFPKDD SKPVHLT FIGYKAGMTH+VRE
Sbjct: 1 MSHRKFSAPRHGSMAFYPKKRSARHRGKVKAFPKDDASKPVHLTCFIGYKAGMTHIVREA 60
Query: 201 DRPGSKINKKEIVEA 245
DRPGSKINKKE+VEA
Sbjct: 61 DRPGSKINKKEVVEA 75
>AE014297-1263|AAF54612.2| 161|Drosophila melanogaster CG4863-PD,
isoform D protein.
Length = 161
Score = 152 bits (368), Expect = 7e-38
Identities = 68/75 (90%), Positives = 70/75 (93%)
Frame = +3
Query: 21 MSHRKFSAPRHGSMGFYPKKRSRRHRGKVKAFPKDDPSKPVHLTAFIGYKAGMTHVVREP 200
MSHRKFSAPRHGSM FYPKKRS RHRGKVKAFPKDD SKPVHLT FIGYKAGMTH+VRE
Sbjct: 1 MSHRKFSAPRHGSMAFYPKKRSARHRGKVKAFPKDDASKPVHLTCFIGYKAGMTHIVREA 60
Query: 201 DRPGSKINKKEIVEA 245
DRPGSKINKKE+VEA
Sbjct: 61 DRPGSKINKKEVVEA 75
>AE014297-1262|AAF54610.2| 416|Drosophila melanogaster CG4863-PA,
isoform A protein.
Length = 416
Score = 152 bits (368), Expect = 7e-38
Identities = 68/75 (90%), Positives = 70/75 (93%)
Frame = +3
Query: 21 MSHRKFSAPRHGSMGFYPKKRSRRHRGKVKAFPKDDPSKPVHLTAFIGYKAGMTHVVREP 200
MSHRKFSAPRHGSM FYPKKRS RHRGKVKAFPKDD SKPVHLT FIGYKAGMTH+VRE
Sbjct: 1 MSHRKFSAPRHGSMAFYPKKRSARHRGKVKAFPKDDASKPVHLTCFIGYKAGMTHIVREA 60
Query: 201 DRPGSKINKKEIVEA 245
DRPGSKINKKE+VEA
Sbjct: 61 DRPGSKINKKEVVEA 75
>AE014297-1266|AAF54611.1| 125|Drosophila melanogaster CG4863-PC,
isoform C protein.
Length = 125
Score = 123 bits (297), Expect = 3e-29
Identities = 55/62 (88%), Positives = 57/62 (91%)
Frame = +3
Query: 60 MGFYPKKRSRRHRGKVKAFPKDDPSKPVHLTAFIGYKAGMTHVVREPDRPGSKINKKEIV 239
M FYPKKRS RHRGKVKAFPKDD SKPVHLT FIGYKAGMTH+VRE DRPGSKINKKE+V
Sbjct: 1 MAFYPKKRSARHRGKVKAFPKDDASKPVHLTCFIGYKAGMTHIVREADRPGSKINKKEVV 60
Query: 240 EA 245
EA
Sbjct: 61 EA 62
>AE014297-1265|AAF54609.1| 403|Drosophila melanogaster CG4863-PE,
isoform E protein.
Length = 403
Score = 123 bits (297), Expect = 3e-29
Identities = 55/62 (88%), Positives = 57/62 (91%)
Frame = +3
Query: 60 MGFYPKKRSRRHRGKVKAFPKDDPSKPVHLTAFIGYKAGMTHVVREPDRPGSKINKKEIV 239
M FYPKKRS RHRGKVKAFPKDD SKPVHLT FIGYKAGMTH+VRE DRPGSKINKKE+V
Sbjct: 1 MAFYPKKRSARHRGKVKAFPKDDASKPVHLTCFIGYKAGMTHIVREADRPGSKINKKEVV 60
Query: 240 EA 245
EA
Sbjct: 61 EA 62
>AE014297-1264|AAN13496.1| 403|Drosophila melanogaster CG4863-PB,
isoform B protein.
Length = 403
Score = 123 bits (297), Expect = 3e-29
Identities = 55/62 (88%), Positives = 57/62 (91%)
Frame = +3
Query: 60 MGFYPKKRSRRHRGKVKAFPKDDPSKPVHLTAFIGYKAGMTHVVREPDRPGSKINKKEIV 239
M FYPKKRS RHRGKVKAFPKDD SKPVHLT FIGYKAGMTH+VRE DRPGSKINKKE+V
Sbjct: 1 MAFYPKKRSARHRGKVKAFPKDDASKPVHLTCFIGYKAGMTHIVREADRPGSKINKKEVV 60
Query: 240 EA 245
EA
Sbjct: 61 EA 62
>BT024960-1|ABE01190.1| 458|Drosophila melanogaster IP15509p
protein.
Length = 458
Score = 27.5 bits (58), Expect = 2.6
Identities = 16/46 (34%), Positives = 21/46 (45%), Gaps = 1/46 (2%)
Frame = +3
Query: 42 APRHGSMGFYPKKRSRRHRGKVKAFPKDDPSKPVHL-TAFIGYKAG 176
A H +P + G +K P +DPS PVH+ T G K G
Sbjct: 352 AHEHSYERLWPIYDYKVRNGTLKDSPYNDPSAPVHIVTGSAGCKEG 397
>AE014298-1519|AAF47971.2| 458|Drosophila melanogaster CG1637-PB,
isoform B protein.
Length = 458
Score = 27.5 bits (58), Expect = 2.6
Identities = 16/46 (34%), Positives = 21/46 (45%), Gaps = 1/46 (2%)
Frame = +3
Query: 42 APRHGSMGFYPKKRSRRHRGKVKAFPKDDPSKPVHL-TAFIGYKAG 176
A H +P + G +K P +DPS PVH+ T G K G
Sbjct: 352 AHEHSYERLWPIYDYKVRNGTLKDSPYNDPSAPVHIVTGSAGCKEG 397
>AE014134-2707|AAN10938.1| 2282|Drosophila melanogaster CG31817-PA
protein.
Length = 2282
Score = 27.5 bits (58), Expect = 2.6
Identities = 13/29 (44%), Positives = 14/29 (48%)
Frame = +3
Query: 45 PRHGSMGFYPKKRSRRHRGKVKAFPKDDP 131
PR G YPK S RH K P+ DP
Sbjct: 1207 PRSGENPNYPKAHSARHYSKENYQPECDP 1235
>AY069180-1|AAL39325.1| 1263|Drosophila melanogaster GH22734p
protein.
Length = 1263
Score = 27.1 bits (57), Expect = 3.5
Identities = 9/23 (39%), Positives = 15/23 (65%)
Frame = -2
Query: 69 RIPSTHDEVPKTSCATYSSIASC 1
R+P+ H + P++ C+ SS A C
Sbjct: 633 RVPAYHKQAPQSPCSPISSNAKC 655
>AY058401-1|AAL13630.1| 922|Drosophila melanogaster GH16858p
protein.
Length = 922
Score = 27.1 bits (57), Expect = 3.5
Identities = 9/23 (39%), Positives = 15/23 (65%)
Frame = -2
Query: 69 RIPSTHDEVPKTSCATYSSIASC 1
R+P+ H + P++ C+ SS A C
Sbjct: 292 RVPAYHKQAPQSPCSPISSNAKC 314
>AE013599-1186|AAF58740.2| 1462|Drosophila melanogaster CG30015-PB,
isoform B protein.
Length = 1462
Score = 27.1 bits (57), Expect = 3.5
Identities = 9/23 (39%), Positives = 15/23 (65%)
Frame = -2
Query: 69 RIPSTHDEVPKTSCATYSSIASC 1
R+P+ H + P++ C+ SS A C
Sbjct: 832 RVPAYHKQAPQSPCSPISSNAKC 854
>AE013599-1185|AAF58741.2| 1462|Drosophila melanogaster CG30015-PA,
isoform A protein.
Length = 1462
Score = 27.1 bits (57), Expect = 3.5
Identities = 9/23 (39%), Positives = 15/23 (65%)
Frame = -2
Query: 69 RIPSTHDEVPKTSCATYSSIASC 1
R+P+ H + P++ C+ SS A C
Sbjct: 832 RVPAYHKQAPQSPCSPISSNAKC 854
>BT024266-1|ABC86328.1| 95|Drosophila melanogaster IP15731p
protein.
Length = 95
Score = 26.2 bits (55), Expect = 6.1
Identities = 15/41 (36%), Positives = 21/41 (51%)
Frame = +3
Query: 45 PRHGSMGFYPKKRSRRHRGKVKAFPKDDPSKPVHLTAFIGY 167
P++ PK R R R + A P +P+ P TAFIG+
Sbjct: 9 PKNQKKKAVPKWRYRS-RKRPMAKPTPNPNNPAMSTAFIGF 48
>BT024245-1|ABC86307.1| 161|Drosophila melanogaster IP15931p
protein.
Length = 161
Score = 26.2 bits (55), Expect = 6.1
Identities = 15/41 (36%), Positives = 21/41 (51%)
Frame = +3
Query: 45 PRHGSMGFYPKKRSRRHRGKVKAFPKDDPSKPVHLTAFIGY 167
P++ PK R R R + A P +P+ P TAFIG+
Sbjct: 75 PKNQKKKAVPKWRYRS-RKRPMAKPTPNPNNPAMSTAFIGF 114
>AE014296-404|AAN11510.1| 202|Drosophila melanogaster CG32308-PB,
isoform B protein.
Length = 202
Score = 26.2 bits (55), Expect = 6.1
Identities = 15/41 (36%), Positives = 21/41 (51%)
Frame = +3
Query: 45 PRHGSMGFYPKKRSRRHRGKVKAFPKDDPSKPVHLTAFIGY 167
P++ PK R R R + A P +P+ P TAFIG+
Sbjct: 94 PKNQKKKAVPKWRYRS-RKRPMAKPTPNPNNPAMSTAFIGF 133
>AE014296-403|AAN11509.1| 183|Drosophila melanogaster CG32308-PA,
isoform A protein.
Length = 183
Score = 26.2 bits (55), Expect = 6.1
Identities = 15/41 (36%), Positives = 21/41 (51%)
Frame = +3
Query: 45 PRHGSMGFYPKKRSRRHRGKVKAFPKDDPSKPVHLTAFIGY 167
P++ PK R R R + A P +P+ P TAFIG+
Sbjct: 75 PKNQKKKAVPKWRYRS-RKRPMAKPTPNPNNPAMSTAFIGF 114
>BT004903-1|AAO47881.1| 799|Drosophila melanogaster LD02989p
protein.
Length = 799
Score = 25.8 bits (54), Expect = 8.0
Identities = 12/21 (57%), Positives = 16/21 (76%)
Frame = +1
Query: 115 SLKMILANPCTLLRSLGTKLV 177
+LK LAN CTL+RSL +L+
Sbjct: 358 TLKNDLANKCTLIRSLQDELL 378
>AF045771-1|AAC02621.1| 830|Drosophila melanogaster miranda
protein.
Length = 830
Score = 25.8 bits (54), Expect = 8.0
Identities = 12/21 (57%), Positives = 16/21 (76%)
Frame = +1
Query: 115 SLKMILANPCTLLRSLGTKLV 177
+LK LAN CTL+RSL +L+
Sbjct: 358 TLKNDLANKCTLIRSLQDELL 378
>AE014297-2738|AAF55723.2| 829|Drosophila melanogaster CG12249-PA,
isoform A protein.
Length = 829
Score = 25.8 bits (54), Expect = 8.0
Identities = 12/21 (57%), Positives = 16/21 (76%)
Frame = +1
Query: 115 SLKMILANPCTLLRSLGTKLV 177
+LK LAN CTL+RSL +L+
Sbjct: 358 TLKNDLANKCTLIRSLQDELL 378
>AE014297-2737|AAN13815.1| 799|Drosophila melanogaster CG12249-PB,
isoform B protein.
Length = 799
Score = 25.8 bits (54), Expect = 8.0
Identities = 12/21 (57%), Positives = 16/21 (76%)
Frame = +1
Query: 115 SLKMILANPCTLLRSLGTKLV 177
+LK LAN CTL+RSL +L+
Sbjct: 358 TLKNDLANKCTLIRSLQDELL 378
>AB005661-1|BAA24111.1| 830|Drosophila melanogaster Miranda
protein.
Length = 830
Score = 25.8 bits (54), Expect = 8.0
Identities = 12/21 (57%), Positives = 16/21 (76%)
Frame = +1
Query: 115 SLKMILANPCTLLRSLGTKLV 177
+LK LAN CTL+RSL +L+
Sbjct: 358 TLKNDLANKCTLIRSLQDELL 378
Database: fruitfly
Posted date: Oct 23, 2007 1:17 PM
Number of letters in database: 24,988,368
Number of sequences in database: 53,049
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 11,893,762
Number of Sequences: 53049
Number of extensions: 218747
Number of successful extensions: 454
Number of sequences better than 10.0: 23
Number of HSP's better than 10.0 without gapping: 453
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 454
length of database: 24,988,368
effective HSP length: 61
effective length of database: 21,752,379
effective search space used: 435047580
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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