Samia BLAST Result against human

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= S06A01NCLL0023_J09
         (191 letters)

Database: human 
           237,096 sequences; 76,859,062 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

AY358214-1|AAQ88581.1|  389|Homo sapiens GPR113 protein.               31   0.50 
AY358172-1|AAQ88539.1|  873|Homo sapiens GPR113 protein.               31   0.50 
AY255611-1|AAO85123.1|  146|Homo sapiens G protein-coupled recep...    31   0.50 
AY140955-1|AAN46669.1| 1079|Homo sapiens G-protein coupled recep...    31   0.50 
AC010896-3|AAY14645.1| 1079|Homo sapiens unknown protein.              31   0.50 
AB083619-1|BAB89332.1|  517|Homo sapiens putative G-protein coup...    31   0.50 
AB065959-1|BAC45265.1|  990|Homo sapiens seven transmembrane hel...    31   0.50 

>AY358214-1|AAQ88581.1|  389|Homo sapiens GPR113 protein.
          Length = 389

 Score = 31.5 bits (68), Expect = 0.50
 Identities = 17/49 (34%), Positives = 24/49 (48%)
 Frame = +2

Query: 44  LQRVVFPITQQTFPFIGAPFQIPTQYSKRPCAAVFYCYFFLLNNTYYIL 190
           L  +VF +      F+GAPF  P   S    AA F C+F  L   +++L
Sbjct: 129 LLNMVFCLLAADTCFLGAPFLSPGPRSPLCLAAAFLCHFLYLATFFWML 177


>AY358172-1|AAQ88539.1|  873|Homo sapiens GPR113 protein.
          Length = 873

 Score = 31.5 bits (68), Expect = 0.50
 Identities = 17/49 (34%), Positives = 24/49 (48%)
 Frame = +2

Query: 44  LQRVVFPITQQTFPFIGAPFQIPTQYSKRPCAAVFYCYFFLLNNTYYIL 190
           L  +VF +      F+GAPF  P   S    AA F C+F  L   +++L
Sbjct: 613 LLNMVFCLLAADTCFLGAPFLSPGPRSPLCLAAAFLCHFLYLATFFWML 661


>AY255611-1|AAO85123.1|  146|Homo sapiens G protein-coupled receptor
           PGR23 protein.
          Length = 146

 Score = 31.5 bits (68), Expect = 0.50
 Identities = 17/49 (34%), Positives = 24/49 (48%)
 Frame = +2

Query: 44  LQRVVFPITQQTFPFIGAPFQIPTQYSKRPCAAVFYCYFFLLNNTYYIL 190
           L  +VF +      F+GAPF  P   S    AA F C+F  L   +++L
Sbjct: 16  LLNMVFCLLAADTCFLGAPFLSPGPRSPLCLAAAFLCHFLYLATFFWML 64


>AY140955-1|AAN46669.1| 1079|Homo sapiens G-protein coupled receptor
           GPR113 protein.
          Length = 1079

 Score = 31.5 bits (68), Expect = 0.50
 Identities = 17/49 (34%), Positives = 24/49 (48%)
 Frame = +2

Query: 44  LQRVVFPITQQTFPFIGAPFQIPTQYSKRPCAAVFYCYFFLLNNTYYIL 190
           L  +VF +      F+GAPF  P   S    AA F C+F  L   +++L
Sbjct: 812 LLNMVFCLLAADTCFLGAPFLSPGPRSPLCLAAAFLCHFLYLATFFWML 860


>AC010896-3|AAY14645.1| 1079|Homo sapiens unknown protein.
          Length = 1079

 Score = 31.5 bits (68), Expect = 0.50
 Identities = 17/49 (34%), Positives = 24/49 (48%)
 Frame = +2

Query: 44  LQRVVFPITQQTFPFIGAPFQIPTQYSKRPCAAVFYCYFFLLNNTYYIL 190
           L  +VF +      F+GAPF  P   S    AA F C+F  L   +++L
Sbjct: 812 LLNMVFCLLAADTCFLGAPFLSPGPRSPLCLAAAFLCHFLYLATFFWML 860


>AB083619-1|BAB89332.1|  517|Homo sapiens putative G-protein coupled
           receptor protein.
          Length = 517

 Score = 31.5 bits (68), Expect = 0.50
 Identities = 17/49 (34%), Positives = 24/49 (48%)
 Frame = +2

Query: 44  LQRVVFPITQQTFPFIGAPFQIPTQYSKRPCAAVFYCYFFLLNNTYYIL 190
           L  +VF +      F+GAPF  P   S    AA F C+F  L   +++L
Sbjct: 250 LLNMVFCLLAADTCFLGAPFLSPGPRSPLCLAAAFLCHFLYLATFFWML 298


>AB065959-1|BAC45265.1|  990|Homo sapiens seven transmembrane helix
           receptor protein.
          Length = 990

 Score = 31.5 bits (68), Expect = 0.50
 Identities = 17/49 (34%), Positives = 24/49 (48%)
 Frame = +2

Query: 44  LQRVVFPITQQTFPFIGAPFQIPTQYSKRPCAAVFYCYFFLLNNTYYIL 190
           L  +VF +      F+GAPF  P   S    AA F C+F  L   +++L
Sbjct: 694 LLNMVFCLLAADTCFLGAPFLSPGPRSPLCLAAAFLCHFLYLATFFWML 742


  Database: human
    Posted date:  Oct 23, 2007  1:18 PM
  Number of letters in database: 76,859,062
  Number of sequences in database:  237,096
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 35,476,811
Number of Sequences: 237096
Number of extensions: 702388
Number of successful extensions: 1153
Number of sequences better than 10.0: 7
Number of HSP's better than 10.0 without gapping: 1147
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 1153
length of database: 76,859,062
effective HSP length: 43
effective length of database: 66,663,934
effective search space used: 1333278680
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)