Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= S06A01NCLL0023_J09
(191 letters)
Database: bee
438 sequences; 146,343 total letters
Searching......................................................done
Score E
Sequences producing significant alignments: (bits) Value
AB207270-1|BAE72137.1| 429|Apis mellifera broad-complex protein. 23 0.25
DQ435327-1|ABD92642.1| 145|Apis mellifera OBP10 protein. 23 0.44
AB253415-1|BAE86926.1| 588|Apis mellifera alpha-glucosidase pro... 21 1.3
AY268030-1|AAP23055.1| 602|Apis mellifera dorsal protein protein. 20 2.3
AB231585-1|BAE17127.1| 898|Apis mellifera Mahya protein. 20 2.3
EF625899-1|ABR45906.1| 1010|Apis mellifera high Glx storage prot... 19 4.1
AY268031-1|AAP23056.1| 810|Apis mellifera dorsal protein splice... 19 4.1
EF127805-1|ABL67942.1| 461|Apis mellifera nicotinic acetylcholi... 19 5.4
EF127804-1|ABL67941.1| 461|Apis mellifera nicotinic acetylcholi... 19 5.4
EF127803-1|ABL67940.1| 461|Apis mellifera nicotinic acetylcholi... 19 5.4
EF127802-1|ABL67939.1| 461|Apis mellifera nicotinic acetylcholi... 19 5.4
EF127801-1|ABL67938.1| 461|Apis mellifera nicotinic acetylcholi... 19 5.4
EF127800-1|ABL67937.1| 461|Apis mellifera nicotinic acetylcholi... 19 5.4
DQ026036-1|AAY87895.1| 529|Apis mellifera nicotinic acetylcholi... 19 5.4
DQ026035-1|AAY87894.1| 529|Apis mellifera nicotinic acetylcholi... 19 5.4
AY569710-1|AAS86663.1| 408|Apis mellifera complementary sex det... 18 9.4
AY569709-1|AAS86662.1| 408|Apis mellifera complementary sex det... 18 9.4
AY569708-1|AAS86661.1| 408|Apis mellifera complementary sex det... 18 9.4
AY569706-1|AAS86659.1| 397|Apis mellifera complementary sex det... 18 9.4
AY500239-1|AAR92109.1| 555|Apis mellifera neuronal nicotinic ac... 18 9.4
AB022907-1|BAA86908.1| 615|Apis mellifera glucose oxidase protein. 18 9.4
>AB207270-1|BAE72137.1| 429|Apis mellifera broad-complex protein.
Length = 429
Score = 23.4 bits (48), Expect = 0.25
Identities = 9/29 (31%), Positives = 13/29 (44%)
Frame = +2
Query: 2 HEGSLQRAGAPQFTLQRVVFPITQQTFPF 88
HE + P F + +FP T +F F
Sbjct: 282 HEAESEHTSTPNFLSEAKIFPPTPGSFNF 310
>DQ435327-1|ABD92642.1| 145|Apis mellifera OBP10 protein.
Length = 145
Score = 22.6 bits (46), Expect = 0.44
Identities = 12/29 (41%), Positives = 15/29 (51%)
Frame = -1
Query: 191 IKCSMYYLEEKNNNKKPRRTASLNTELVF 105
+KC MY L E+ +R SLN L F
Sbjct: 69 LKCYMYCLWEQFGLVDDKRELSLNGMLTF 97
>AB253415-1|BAE86926.1| 588|Apis mellifera alpha-glucosidase
protein.
Length = 588
Score = 21.0 bits (42), Expect = 1.3
Identities = 14/37 (37%), Positives = 17/37 (45%), Gaps = 1/37 (2%)
Frame = -3
Query: 126 FEY*VGIW-KGAPINGNVCCVIGNTTR*RVNWGAPAR 19
F+ + W KG P N V+GN R RV P R
Sbjct: 336 FKVIIDNWIKGTPQNNVPNWVMGNHDRVRVGTRYPGR 372
>AY268030-1|AAP23055.1| 602|Apis mellifera dorsal protein protein.
Length = 602
Score = 20.2 bits (40), Expect = 2.3
Identities = 8/17 (47%), Positives = 10/17 (58%)
Frame = +2
Query: 68 TQQTFPFIGAPFQIPTQ 118
TQQ FP++ QI Q
Sbjct: 459 TQQQFPYVHDTLQIQPQ 475
>AB231585-1|BAE17127.1| 898|Apis mellifera Mahya protein.
Length = 898
Score = 20.2 bits (40), Expect = 2.3
Identities = 11/36 (30%), Positives = 16/36 (44%)
Frame = +1
Query: 10 FTPTGRRPPVHSSTGGVPYYTTNVSVYRGPLPNTNS 117
+ TG SS GG+ +++ V P P T S
Sbjct: 466 YADTGAYMCQASSIGGITRDISSLVVQEQPTPTTES 501
>EF625899-1|ABR45906.1| 1010|Apis mellifera high Glx storage protein
protein.
Length = 1010
Score = 19.4 bits (38), Expect = 4.1
Identities = 7/16 (43%), Positives = 8/16 (50%)
Frame = +1
Query: 64 YYTTNVSVYRGPLPNT 111
YY + Y G PNT
Sbjct: 717 YYANLYTKYHGQYPNT 732
>AY268031-1|AAP23056.1| 810|Apis mellifera dorsal protein splice
variant B protein.
Length = 810
Score = 19.4 bits (38), Expect = 4.1
Identities = 7/12 (58%), Positives = 9/12 (75%)
Frame = +1
Query: 43 SSTGGVPYYTTN 78
++TG V Y TTN
Sbjct: 718 TTTGNVSYLTTN 729
>EF127805-1|ABL67942.1| 461|Apis mellifera nicotinic acetylcholine
receptor subunitalpha 6 transcript variant 6 protein.
Length = 461
Score = 19.0 bits (37), Expect = 5.4
Identities = 10/37 (27%), Positives = 16/37 (43%)
Frame = +1
Query: 55 GVPYYTTNVSVYRGPLPNTNSVFKEAVRRGFLLLFFS 165
G+P ++ P P + F +RR L FF+
Sbjct: 164 GMPGKKNTITYQCCPEPYVDVTFTIQIRRRTLYYFFN 200
>EF127804-1|ABL67941.1| 461|Apis mellifera nicotinic acetylcholine
receptor subunitalpha 6 transcript variant 5 protein.
Length = 461
Score = 19.0 bits (37), Expect = 5.4
Identities = 10/37 (27%), Positives = 16/37 (43%)
Frame = +1
Query: 55 GVPYYTTNVSVYRGPLPNTNSVFKEAVRRGFLLLFFS 165
G+P ++ P P + F +RR L FF+
Sbjct: 164 GMPGKKNTITYQCCPEPYVDVTFTIQIRRRTLYYFFN 200
>EF127803-1|ABL67940.1| 461|Apis mellifera nicotinic acetylcholine
receptor subunitalpha 6 transcript variant 4 protein.
Length = 461
Score = 19.0 bits (37), Expect = 5.4
Identities = 10/37 (27%), Positives = 16/37 (43%)
Frame = +1
Query: 55 GVPYYTTNVSVYRGPLPNTNSVFKEAVRRGFLLLFFS 165
G+P ++ P P + F +RR L FF+
Sbjct: 164 GMPGKKNTITYQCCPEPYVDVTFTIQIRRRTLYYFFN 200
>EF127802-1|ABL67939.1| 461|Apis mellifera nicotinic acetylcholine
receptor subunitalpha 6 transcript variant 3 protein.
Length = 461
Score = 19.0 bits (37), Expect = 5.4
Identities = 10/37 (27%), Positives = 16/37 (43%)
Frame = +1
Query: 55 GVPYYTTNVSVYRGPLPNTNSVFKEAVRRGFLLLFFS 165
G+P ++ P P + F +RR L FF+
Sbjct: 164 GMPGKKNTITYQCCPEPYVDVTFTIQIRRRTLYYFFN 200
>EF127801-1|ABL67938.1| 461|Apis mellifera nicotinic acetylcholine
receptor subunitalpha 6 transcript variant 2 protein.
Length = 461
Score = 19.0 bits (37), Expect = 5.4
Identities = 10/37 (27%), Positives = 16/37 (43%)
Frame = +1
Query: 55 GVPYYTTNVSVYRGPLPNTNSVFKEAVRRGFLLLFFS 165
G+P ++ P P + F +RR L FF+
Sbjct: 164 GMPGKKNTITYQCCPEPYVDVTFTIQIRRRTLYYFFN 200
>EF127800-1|ABL67937.1| 461|Apis mellifera nicotinic acetylcholine
receptor subunitalpha 6 transcript variant 1 protein.
Length = 461
Score = 19.0 bits (37), Expect = 5.4
Identities = 10/37 (27%), Positives = 16/37 (43%)
Frame = +1
Query: 55 GVPYYTTNVSVYRGPLPNTNSVFKEAVRRGFLLLFFS 165
G+P ++ P P + F +RR L FF+
Sbjct: 164 GMPGKKNTITYQCCPEPYVDVTFTIQIRRRTLYYFFN 200
>DQ026036-1|AAY87895.1| 529|Apis mellifera nicotinic acetylcholine
receptor alpha6subunit protein.
Length = 529
Score = 19.0 bits (37), Expect = 5.4
Identities = 10/37 (27%), Positives = 16/37 (43%)
Frame = +1
Query: 55 GVPYYTTNVSVYRGPLPNTNSVFKEAVRRGFLLLFFS 165
G+P ++ P P + F +RR L FF+
Sbjct: 232 GMPGKKNTITYQCCPEPYVDVTFTIQIRRRTLYYFFN 268
>DQ026035-1|AAY87894.1| 529|Apis mellifera nicotinic acetylcholine
receptor alpha6subunit protein.
Length = 529
Score = 19.0 bits (37), Expect = 5.4
Identities = 10/37 (27%), Positives = 16/37 (43%)
Frame = +1
Query: 55 GVPYYTTNVSVYRGPLPNTNSVFKEAVRRGFLLLFFS 165
G+P ++ P P + F +RR L FF+
Sbjct: 232 GMPGKKNTITYQCCPEPYVDVTFTIQIRRRTLYYFFN 268
>AY569710-1|AAS86663.1| 408|Apis mellifera complementary sex
determiner protein.
Length = 408
Score = 18.2 bits (35), Expect = 9.4
Identities = 6/11 (54%), Positives = 8/11 (72%)
Frame = +3
Query: 78 RFRL*GPPSKY 110
RFR GPP+ +
Sbjct: 374 RFRYIGPPTSF 384
>AY569709-1|AAS86662.1| 408|Apis mellifera complementary sex
determiner protein.
Length = 408
Score = 18.2 bits (35), Expect = 9.4
Identities = 6/11 (54%), Positives = 8/11 (72%)
Frame = +3
Query: 78 RFRL*GPPSKY 110
RFR GPP+ +
Sbjct: 374 RFRYIGPPTSF 384
>AY569708-1|AAS86661.1| 408|Apis mellifera complementary sex
determiner protein.
Length = 408
Score = 18.2 bits (35), Expect = 9.4
Identities = 6/11 (54%), Positives = 8/11 (72%)
Frame = +3
Query: 78 RFRL*GPPSKY 110
RFR GPP+ +
Sbjct: 374 RFRYIGPPTSF 384
>AY569706-1|AAS86659.1| 397|Apis mellifera complementary sex
determiner protein.
Length = 397
Score = 18.2 bits (35), Expect = 9.4
Identities = 6/11 (54%), Positives = 8/11 (72%)
Frame = +3
Query: 78 RFRL*GPPSKY 110
RFR GPP+ +
Sbjct: 363 RFRYIGPPTSF 373
>AY500239-1|AAR92109.1| 555|Apis mellifera neuronal nicotinic
acetylcholine receptoralpha7-1 protein.
Length = 555
Score = 18.2 bits (35), Expect = 9.4
Identities = 11/37 (29%), Positives = 15/37 (40%)
Frame = +1
Query: 55 GVPYYTTNVSVYRGPLPNTNSVFKEAVRRGFLLLFFS 165
GVP + P P + F +RR L FF+
Sbjct: 201 GVPGKRNEIYYNCCPEPYIDITFVVIIRRRTLYYFFN 237
>AB022907-1|BAA86908.1| 615|Apis mellifera glucose oxidase protein.
Length = 615
Score = 18.2 bits (35), Expect = 9.4
Identities = 6/13 (46%), Positives = 9/13 (69%)
Frame = -1
Query: 176 YYLEEKNNNKKPR 138
YYL+ +NN + R
Sbjct: 188 YYLKSENNTELSR 200
Database: bee
Posted date: Oct 23, 2007 1:17 PM
Number of letters in database: 146,343
Number of sequences in database: 438
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 68,725
Number of Sequences: 438
Number of extensions: 1492
Number of successful extensions: 21
Number of sequences better than 10.0: 21
Number of HSP's better than 10.0 without gapping: 21
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 21
length of database: 146,343
effective HSP length: 43
effective length of database: 127,509
effective search space used: 2550180
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 35 (18.9 bits)
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