Samia BLAST Result against mosquito

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= S06A01NCLL0023_J05
         (181 letters)

Database: mosquito 
           2352 sequences; 563,979 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

AY239359-1|AAO73809.1| 2259|Anopheles gambiae dicer-1 protein.         23   1.3  
AY753540-1|AAV28543.1| 3320|Anopheles gambiae SGS3 protein.            21   5.2  
AY753539-1|AAV28542.1| 3318|Anopheles gambiae SGS2 protein.            21   5.2  
Z69982-1|CAA93822.1|  143|Anopheles gambiae lectin protein.            20   9.1  

>AY239359-1|AAO73809.1| 2259|Anopheles gambiae dicer-1 protein.
          Length = 2259

 Score = 23.0 bits (47), Expect = 1.3
 Identities = 9/25 (36%), Positives = 17/25 (68%), Gaps = 1/25 (4%)
 Frame = +3

Query: 72  IHTNYRYLYFYCRSVK-QFVQLSYY 143
           +H   R LY +CR+V+ + ++ SY+
Sbjct: 431 VHNQQRILYCFCRNVECKELEKSYH 455


>AY753540-1|AAV28543.1| 3320|Anopheles gambiae SGS3 protein.
          Length = 3320

 Score = 21.0 bits (42), Expect = 5.2
 Identities = 9/23 (39%), Positives = 13/23 (56%)
 Frame = +3

Query: 12 GTRISCQIVLNIFFYFDFLFIHT 80
          G R+  Q +LN+ F  +F   HT
Sbjct: 5  GNRLQYQQLLNVSFGDEFEVFHT 27


>AY753539-1|AAV28542.1| 3318|Anopheles gambiae SGS2 protein.
          Length = 3318

 Score = 21.0 bits (42), Expect = 5.2
 Identities = 9/23 (39%), Positives = 13/23 (56%)
 Frame = +3

Query: 12 GTRISCQIVLNIFFYFDFLFIHT 80
          G R+  Q +LN+ F  +F   HT
Sbjct: 5  GNRLQYQQLLNVSFGDEFEVFHT 27


>Z69982-1|CAA93822.1|  143|Anopheles gambiae lectin protein.
          Length = 143

 Score = 20.2 bits (40), Expect = 9.1
 Identities = 6/11 (54%), Positives = 7/11 (63%)
 Frame = -1

Query: 175 HLCSSNHRHPW 143
           H C  NHR P+
Sbjct: 113 HYCDFNHRMPY 123


  Database: mosquito
    Posted date:  Oct 23, 2007  1:18 PM
  Number of letters in database: 563,979
  Number of sequences in database:  2352
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 165,788
Number of Sequences: 2352
Number of extensions: 2338
Number of successful extensions: 4
Number of sequences better than 10.0: 4
Number of HSP's better than 10.0 without gapping: 4
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 4
length of database: 563,979
effective HSP length: 38
effective length of database: 474,603
effective search space used:  9966663
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 40 (21.2 bits)