Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= S06A01NCLL0023_J05
(181 letters)
Database: celegans
27,780 sequences; 12,740,198 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
Z70268-6|CAA94221.2| 1243|Caenorhabditis elegans Hypothetical pr... 27 1.3
Z70265-4|CAA94203.2| 1243|Caenorhabditis elegans Hypothetical pr... 27 1.3
DQ917240-1|ABI94563.1| 1797|Caenorhabditis elegans four domain-t... 26 3.1
AY555271-1|AAS65871.2| 1831|Caenorhabditis elegans four domain-t... 26 3.1
AF045640-7|AAU05589.1| 978|Caenorhabditis elegans Novel channel... 26 3.1
AF045640-6|AAU05588.1| 1562|Caenorhabditis elegans Novel channel... 26 3.1
AF045640-5|AAM81121.1| 1913|Caenorhabditis elegans Novel channel... 26 3.1
AF045640-4|AAU05590.1| 1861|Caenorhabditis elegans Novel channel... 26 3.1
Z70268-5|CAJ85767.2| 1204|Caenorhabditis elegans Hypothetical pr... 26 4.1
Z70268-4|CAA94220.3| 1263|Caenorhabditis elegans Hypothetical pr... 26 4.1
Z70268-3|CAA94219.3| 1263|Caenorhabditis elegans Hypothetical pr... 26 4.1
Z70265-1|CAA94202.1| 1283|Caenorhabditis elegans Hypothetical pr... 25 5.4
AL021497-8|CAA16409.1| 334|Caenorhabditis elegans Hypothetical ... 25 5.4
AF039710-1|AAB96691.1| 316|Caenorhabditis elegans Serpentine re... 25 5.4
AF038620-1|AAB93487.1| 256|Caenorhabditis elegans Hypothetical ... 25 5.4
Z83116-6|CAB05565.2| 302|Caenorhabditis elegans Hypothetical pr... 25 7.1
Z81133-5|CAB03442.2| 1838|Caenorhabditis elegans Hypothetical pr... 25 7.1
Z81132-11|CAB03426.2| 302|Caenorhabditis elegans Hypothetical p... 25 7.1
U41535-13|AAB63405.1| 1075|Caenorhabditis elegans Hypothetical p... 25 7.1
U40941-5|AAA81710.1| 300|Caenorhabditis elegans Hypothetical pr... 25 7.1
AL132862-33|CAB70222.3| 308|Caenorhabditis elegans Hypothetical... 25 7.1
AL032630-12|CAA21567.1| 260|Caenorhabditis elegans Hypothetical... 25 7.1
AF099920-10|AAO91710.1| 1051|Caenorhabditis elegans Transbilayer... 25 7.1
AF099920-9|AAK29849.1| 1222|Caenorhabditis elegans Transbilayer ... 25 7.1
Z79756-6|CAB02117.3| 693|Caenorhabditis elegans Hypothetical pr... 25 9.4
U50191-1|AAO38600.2| 372|Caenorhabditis elegans Dumpy : shorter... 25 9.4
AF024498-11|AAF39802.1| 310|Caenorhabditis elegans Serpentine r... 25 9.4
>Z70268-6|CAA94221.2| 1243|Caenorhabditis elegans Hypothetical
protein T21E8.3 protein.
Length = 1243
Score = 27.5 bits (58), Expect = 1.3
Identities = 10/14 (71%), Positives = 13/14 (92%)
Frame = -2
Query: 144 GNSSIVQIVLHFYN 103
G S+IVQ++LHFYN
Sbjct: 420 GKSTIVQLLLHFYN 433
>Z70265-4|CAA94203.2| 1243|Caenorhabditis elegans Hypothetical
protein T21E8.3 protein.
Length = 1243
Score = 27.5 bits (58), Expect = 1.3
Identities = 10/14 (71%), Positives = 13/14 (92%)
Frame = -2
Query: 144 GNSSIVQIVLHFYN 103
G S+IVQ++LHFYN
Sbjct: 420 GKSTIVQLLLHFYN 433
>DQ917240-1|ABI94563.1| 1797|Caenorhabditis elegans four domain-type
voltage-gatedion channel alpha-1 subunit protein.
Length = 1797
Score = 26.2 bits (55), Expect = 3.1
Identities = 10/22 (45%), Positives = 14/22 (63%)
Frame = +3
Query: 63 FLFIHTNYRYLYFYCRSVKQFV 128
F F+H NYR Y RS++ F+
Sbjct: 146 FPFLHLNYRAWYGAIRSIRPFI 167
>AY555271-1|AAS65871.2| 1831|Caenorhabditis elegans four domain-type
voltage-gatedion channel alpha-1 subunit protein.
Length = 1831
Score = 26.2 bits (55), Expect = 3.1
Identities = 10/22 (45%), Positives = 14/22 (63%)
Frame = +3
Query: 63 FLFIHTNYRYLYFYCRSVKQFV 128
F F+H NYR Y RS++ F+
Sbjct: 146 FPFLHLNYRAWYGAIRSIRPFI 167
>AF045640-7|AAU05589.1| 978|Caenorhabditis elegans Novel channel
type/putative nematodecalcium channel protein 1, isoform
b protein.
Length = 978
Score = 26.2 bits (55), Expect = 3.1
Identities = 10/22 (45%), Positives = 14/22 (63%)
Frame = +3
Query: 63 FLFIHTNYRYLYFYCRSVKQFV 128
F F+H NYR Y RS++ F+
Sbjct: 204 FPFLHLNYRAWYGAIRSIRPFI 225
>AF045640-6|AAU05588.1| 1562|Caenorhabditis elegans Novel channel
type/putative nematodecalcium channel protein 1, isoform
a protein.
Length = 1562
Score = 26.2 bits (55), Expect = 3.1
Identities = 10/22 (45%), Positives = 14/22 (63%)
Frame = +3
Query: 63 FLFIHTNYRYLYFYCRSVKQFV 128
F F+H NYR Y RS++ F+
Sbjct: 204 FPFLHLNYRAWYGAIRSIRPFI 225
>AF045640-5|AAM81121.1| 1913|Caenorhabditis elegans Novel channel
type/putative nematodecalcium channel protein 1, isoform
c protein.
Length = 1913
Score = 26.2 bits (55), Expect = 3.1
Identities = 10/22 (45%), Positives = 14/22 (63%)
Frame = +3
Query: 63 FLFIHTNYRYLYFYCRSVKQFV 128
F F+H NYR Y RS++ F+
Sbjct: 204 FPFLHLNYRAWYGAIRSIRPFI 225
>AF045640-4|AAU05590.1| 1861|Caenorhabditis elegans Novel channel
type/putative nematodecalcium channel protein 1, isoform
d protein.
Length = 1861
Score = 26.2 bits (55), Expect = 3.1
Identities = 10/22 (45%), Positives = 14/22 (63%)
Frame = +3
Query: 63 FLFIHTNYRYLYFYCRSVKQFV 128
F F+H NYR Y RS++ F+
Sbjct: 176 FPFLHLNYRAWYGAIRSIRPFI 197
>Z70268-5|CAJ85767.2| 1204|Caenorhabditis elegans Hypothetical
protein T21E8.1b protein.
Length = 1204
Score = 25.8 bits (54), Expect = 4.1
Identities = 8/14 (57%), Positives = 13/14 (92%)
Frame = -2
Query: 144 GNSSIVQIVLHFYN 103
G S++VQ++LH+YN
Sbjct: 362 GKSTVVQLLLHYYN 375
>Z70268-4|CAA94220.3| 1263|Caenorhabditis elegans Hypothetical
protein T21E8.1a protein.
Length = 1263
Score = 25.8 bits (54), Expect = 4.1
Identities = 8/14 (57%), Positives = 13/14 (92%)
Frame = -2
Query: 144 GNSSIVQIVLHFYN 103
G S++VQ++LH+YN
Sbjct: 421 GKSTVVQLLLHYYN 434
>Z70268-3|CAA94219.3| 1263|Caenorhabditis elegans Hypothetical
protein T21E8.2 protein.
Length = 1263
Score = 25.8 bits (54), Expect = 4.1
Identities = 8/14 (57%), Positives = 13/14 (92%)
Frame = -2
Query: 144 GNSSIVQIVLHFYN 103
G S++VQ++LH+YN
Sbjct: 421 GKSTVVQLLLHYYN 434
>Z70265-1|CAA94202.1| 1283|Caenorhabditis elegans Hypothetical
protein C05A9.1 protein.
Length = 1283
Score = 25.4 bits (53), Expect = 5.4
Identities = 7/14 (50%), Positives = 13/14 (92%)
Frame = -2
Query: 144 GNSSIVQIVLHFYN 103
G S+++Q++LH+YN
Sbjct: 445 GKSTVIQLLLHYYN 458
>AL021497-8|CAA16409.1| 334|Caenorhabditis elegans Hypothetical
protein Y51A2D.12 protein.
Length = 334
Score = 25.4 bits (53), Expect = 5.4
Identities = 11/23 (47%), Positives = 13/23 (56%)
Frame = +3
Query: 39 LNIFFYFDFLFIHTNYRYLYFYC 107
LNIF F F F +T Y + F C
Sbjct: 93 LNIFHTFHFEFAYTQYIFNCFVC 115
>AF039710-1|AAB96691.1| 316|Caenorhabditis elegans Serpentine
receptor, class x protein110 protein.
Length = 316
Score = 25.4 bits (53), Expect = 5.4
Identities = 10/42 (23%), Positives = 21/42 (50%)
Frame = +3
Query: 24 SCQIVLNIFFYFDFLFIHTNYRYLYFYCRSVKQFVQLSYYHG 149
S +++N+F ++ FL + Y+ +S+ + L Y G
Sbjct: 25 SMGVLINLFMFYHFLSLEKTVFYILCSSKSISNTLVLLIYFG 66
>AF038620-1|AAB93487.1| 256|Caenorhabditis elegans Hypothetical
protein H10D12.2 protein.
Length = 256
Score = 25.4 bits (53), Expect = 5.4
Identities = 12/42 (28%), Positives = 24/42 (57%)
Frame = +3
Query: 15 TRISCQIVLNIFFYFDFLFIHTNYRYLYFYCRSVKQFVQLSY 140
+ +S Q + +IFF+ DF+F+ R F ++V ++ + Y
Sbjct: 209 SEVSVQYLWSIFFWSDFVFVKPKIR--NFRLKNVGIYILIHY 248
>Z83116-6|CAB05565.2| 302|Caenorhabditis elegans Hypothetical
protein M01B2.7 protein.
Length = 302
Score = 25.0 bits (52), Expect = 7.1
Identities = 9/27 (33%), Positives = 15/27 (55%)
Frame = +1
Query: 34 LC*IYFSILIFCLYILITDIYIFIVEV 114
+C I + FC +L TD+ F+V +
Sbjct: 39 ICNILICVCCFCDLLLFTDVIAFVVSM 65
>Z81133-5|CAB03442.2| 1838|Caenorhabditis elegans Hypothetical
protein T28B8.3a protein.
Length = 1838
Score = 25.0 bits (52), Expect = 7.1
Identities = 13/45 (28%), Positives = 24/45 (53%), Gaps = 2/45 (4%)
Frame = +3
Query: 6 EFGTRISCQIVLNI--FFYFDFLFIHTNYRYLYFYCRSVKQFVQL 134
+FG R+S +++LN+ FFY + H + + C + K + L
Sbjct: 61 QFGLRMSKEMLLNLVRFFYEVLIKEHQHTDLIMVACEAFKNMMDL 105
>Z81132-11|CAB03426.2| 302|Caenorhabditis elegans Hypothetical
protein T26E4.15 protein.
Length = 302
Score = 25.0 bits (52), Expect = 7.1
Identities = 9/27 (33%), Positives = 15/27 (55%)
Frame = +1
Query: 34 LC*IYFSILIFCLYILITDIYIFIVEV 114
+C I + FC +L TD+ F+V +
Sbjct: 39 ICNILICVCCFCDLLLFTDVIAFVVSM 65
>U41535-13|AAB63405.1| 1075|Caenorhabditis elegans Hypothetical
protein F18A1.1 protein.
Length = 1075
Score = 25.0 bits (52), Expect = 7.1
Identities = 12/26 (46%), Positives = 17/26 (65%)
Frame = +1
Query: 28 VKLC*IYFSILIFCLYILITDIYIFI 105
V LC + SILIF Y++I + IF+
Sbjct: 752 VSLC-VLASILIFVCYVMIDVVIIFL 776
>U40941-5|AAA81710.1| 300|Caenorhabditis elegans Hypothetical
protein F35C8.5 protein.
Length = 300
Score = 25.0 bits (52), Expect = 7.1
Identities = 10/23 (43%), Positives = 15/23 (65%)
Frame = +3
Query: 48 FFYFDFLFIHTNYRYLYFYCRSV 116
F YF F +I+ ++LY +C SV
Sbjct: 143 FTYFWFHYINHKVKWLYRWCHSV 165
>AL132862-33|CAB70222.3| 308|Caenorhabditis elegans Hypothetical
protein Y73F8A.3 protein.
Length = 308
Score = 25.0 bits (52), Expect = 7.1
Identities = 11/38 (28%), Positives = 21/38 (55%), Gaps = 1/38 (2%)
Frame = +3
Query: 36 VLNIFFYFDFLFIH-TNYRYLYFYCRSVKQFVQLSYYH 146
+L I F + +L IH ++ YFY + F+ ++Y+
Sbjct: 105 ILLIHFIYRYLVIHNSSLTKKYFYIYMLGSFITFAFYY 142
>AL032630-12|CAA21567.1| 260|Caenorhabditis elegans Hypothetical
protein Y62H9A.12 protein.
Length = 260
Score = 25.0 bits (52), Expect = 7.1
Identities = 9/21 (42%), Positives = 14/21 (66%)
Frame = +3
Query: 60 DFLFIHTNYRYLYFYCRSVKQ 122
D+LFI T R Y++ + +KQ
Sbjct: 148 DYLFIDTPIRQFYYFQKHIKQ 168
>AF099920-10|AAO91710.1| 1051|Caenorhabditis elegans Transbilayer
amphipath transporters(subfamily iv p-type atpase)
protein 2, isoform b protein.
Length = 1051
Score = 25.0 bits (52), Expect = 7.1
Identities = 10/21 (47%), Positives = 13/21 (61%)
Frame = +3
Query: 39 LNIFFYFDFLFIHTNYRYLYF 101
L FFY +F F TN+ Y +F
Sbjct: 650 LRYFFYKNFAFTLTNFWYSFF 670
>AF099920-9|AAK29849.1| 1222|Caenorhabditis elegans Transbilayer
amphipath transporters(subfamily iv p-type atpase)
protein 2, isoform a protein.
Length = 1222
Score = 25.0 bits (52), Expect = 7.1
Identities = 10/21 (47%), Positives = 13/21 (61%)
Frame = +3
Query: 39 LNIFFYFDFLFIHTNYRYLYF 101
L FFY +F F TN+ Y +F
Sbjct: 821 LRYFFYKNFAFTLTNFWYSFF 841
>Z79756-6|CAB02117.3| 693|Caenorhabditis elegans Hypothetical
protein F53C11.2 protein.
Length = 693
Score = 24.6 bits (51), Expect = 9.4
Identities = 11/28 (39%), Positives = 16/28 (57%)
Frame = +3
Query: 21 ISCQIVLNIFFYFDFLFIHTNYRYLYFY 104
IS Q+VLN +F D LF+ + Y +
Sbjct: 301 ISRQLVLNSYFSIDTLFVLSGITEAYIF 328
>U50191-1|AAO38600.2| 372|Caenorhabditis elegans Dumpy : shorter
than wild-typeprotein 10, isoform b protein.
Length = 372
Score = 24.6 bits (51), Expect = 9.4
Identities = 10/24 (41%), Positives = 12/24 (50%)
Frame = +3
Query: 36 VLNIFFYFDFLFIHTNYRYLYFYC 107
V N Y D + R+LYFYC
Sbjct: 53 VQNTITYVDREMAYCEVRFLYFYC 76
>AF024498-11|AAF39802.1| 310|Caenorhabditis elegans Serpentine
receptor, class x protein108 protein.
Length = 310
Score = 24.6 bits (51), Expect = 9.4
Identities = 9/42 (21%), Positives = 21/42 (50%)
Frame = +3
Query: 24 SCQIVLNIFFYFDFLFIHTNYRYLYFYCRSVKQFVQLSYYHG 149
S +++N+F ++ F+ + Y+ +S+ + L Y G
Sbjct: 20 SIGVLVNVFMFYHFISLEKTVFYILCSSKSISNTLVLLIYFG 61
Database: celegans
Posted date: Oct 23, 2007 1:18 PM
Number of letters in database: 12,740,198
Number of sequences in database: 27,780
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 3,727,250
Number of Sequences: 27780
Number of extensions: 54521
Number of successful extensions: 218
Number of sequences better than 10.0: 27
Number of HSP's better than 10.0 without gapping: 209
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 218
length of database: 12,740,198
effective HSP length: 40
effective length of database: 11,628,998
effective search space used: 220950962
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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