Samia BLAST Result against fruitfly

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= S06A01NCLL0023_J04
         (204 letters)

Database: fruitfly 
           53,049 sequences; 24,988,368 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

AF247761-1|AAF74192.1| 1671|Drosophila melanogaster kinesin supe...    29   0.67 
AE013599-2336|AAM70884.1| 1670|Drosophila melanogaster CG8566-PD...    29   0.67 
AE013599-2377|AAS64833.1|  827|Drosophila melanogaster CG33455-P...    27   3.6  

>AF247761-1|AAF74192.1| 1671|Drosophila melanogaster kinesin
           superfamily member DUnc104 protein.
          Length = 1671

 Score = 29.5 bits (63), Expect = 0.67
 Identities = 11/20 (55%), Positives = 16/20 (80%)
 Frame = -3

Query: 73  VQYQYTSVSGTLWSPAPPSL 14
           VQ+Q+T ++ TL+SP PP L
Sbjct: 747 VQFQFTLLTDTLYSPLPPEL 766


>AE013599-2336|AAM70884.1| 1670|Drosophila melanogaster CG8566-PD
           protein.
          Length = 1670

 Score = 29.5 bits (63), Expect = 0.67
 Identities = 11/20 (55%), Positives = 16/20 (80%)
 Frame = -3

Query: 73  VQYQYTSVSGTLWSPAPPSL 14
           VQ+Q+T ++ TL+SP PP L
Sbjct: 746 VQFQFTLLTDTLYSPLPPEL 765


>AE013599-2377|AAS64833.1|  827|Drosophila melanogaster CG33455-PA
           protein.
          Length = 827

 Score = 27.1 bits (57), Expect = 3.6
 Identities = 13/34 (38%), Positives = 19/34 (55%)
 Frame = +1

Query: 52  HSYIGTEQRVHLFRIDEHVNINYL*RVRGFARCE 153
           H Y   E++    R  E VN+N+L R RGF + +
Sbjct: 507 HIYSEYEEKFESLRNVEPVNLNHLARSRGFTQSQ 540


  Database: fruitfly
    Posted date:  Oct 23, 2007  1:17 PM
  Number of letters in database: 24,988,368
  Number of sequences in database:  53,049
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 9,574,357
Number of Sequences: 53049
Number of extensions: 154813
Number of successful extensions: 563
Number of sequences better than 10.0: 3
Number of HSP's better than 10.0 without gapping: 559
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 563
length of database: 24,988,368
effective HSP length: 47
effective length of database: 22,495,065
effective search space used: 449901300
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)