Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= S06A01NCLL0023_J03
(326 letters)
Database: human
237,096 sequences; 76,859,062 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
U94855-1|AAD03467.1| 357|Homo sapiens translation initiation fa... 135 3e-32
CR456959-1|CAG33240.1| 357|Homo sapiens EIF3S5 protein. 135 3e-32
BT006894-1|AAP35540.1| 357|Homo sapiens eukaryotic translation ... 135 3e-32
BC000490-1|AAH00490.1| 357|Homo sapiens eukaryotic translation ... 135 3e-32
AK095574-1|BAC04577.1| 350|Homo sapiens protein ( Homo sapiens ... 135 3e-32
AF354444-1|AAK18634.1| 348|Homo sapiens IFP38 protein. 119 2e-27
D50063-1|BAA08780.1| 324|Homo sapiens proteasome subunit p40 / ... 72 5e-13
BC012606-1|AAH12606.1| 324|Homo sapiens proteasome (prosome, ma... 72 5e-13
BC000338-1|AAH00338.1| 326|Homo sapiens PSMD7 protein protein. 72 5e-13
AF092576-1|AAC84044.1| 352|Homo sapiens translation initiation ... 50 2e-06
U54559-1|AAD03465.1| 352|Homo sapiens translation initiation fa... 48 7e-06
CR456906-1|CAG33187.1| 352|Homo sapiens EIF3S3 protein. 48 7e-06
BT019594-1|AAV38401.1| 352|Homo sapiens eukaryotic translation ... 48 7e-06
BC000386-1|AAH00386.1| 352|Homo sapiens eukaryotic translation ... 48 7e-06
AK222620-1|BAD96340.1| 352|Homo sapiens eukaryotic translation ... 48 7e-06
AK222520-1|BAD96240.1| 352|Homo sapiens eukaryotic translation ... 48 7e-06
BC090880-1|AAH90880.1| 349|Homo sapiens EIF3H protein protein. 42 4e-04
U70735-1|AAD03469.1| 297|Homo sapiens 34 kDa Mov34 homolog prot... 40 0.001
BC002520-1|AAH02520.2| 327|Homo sapiens COP9 constitutive photo... 40 0.001
AB032953-1|BAA86441.2| 2144|Homo sapiens KIAA1127 protein protein. 31 1.1
>U94855-1|AAD03467.1| 357|Homo sapiens translation initiation
factor 3 47 kDa subunit protein.
Length = 357
Score = 135 bits (326), Expect = 3e-32
Identities = 58/105 (55%), Positives = 82/105 (78%)
Frame = +1
Query: 7 GLSVKVHPVVLFQIVDAYERRNADSHRVIGTLLGTSDKGVVEVTNCFCVPHKEHADQVEA 186
G V++HPV+L IVD+YERRN + RVIGTLLGT DK VEVTNCF VPH E D+V
Sbjct: 89 GRVVRLHPVILASIVDSYERRNEGAARVIGTLLGTVDKHSVEVTNCFSVPHNESEDEVAV 148
Query: 187 ELNYAMDVYELNRRVNASENIVGWWATGNEVRNHASVIHEYYTRE 321
++ +A ++YEL+++V+ +E I+GW+ATG+++ H+ +IHEYY+RE
Sbjct: 149 DMEFAKNMYELHKKVSPNELILGWYATGHDITEHSVLIHEYYSRE 193
>CR456959-1|CAG33240.1| 357|Homo sapiens EIF3S5 protein.
Length = 357
Score = 135 bits (326), Expect = 3e-32
Identities = 58/105 (55%), Positives = 82/105 (78%)
Frame = +1
Query: 7 GLSVKVHPVVLFQIVDAYERRNADSHRVIGTLLGTSDKGVVEVTNCFCVPHKEHADQVEA 186
G V++HPV+L IVD+YERRN + RVIGTLLGT DK VEVTNCF VPH E D+V
Sbjct: 89 GRVVRLHPVILASIVDSYERRNEGAARVIGTLLGTVDKHSVEVTNCFSVPHNESEDEVAV 148
Query: 187 ELNYAMDVYELNRRVNASENIVGWWATGNEVRNHASVIHEYYTRE 321
++ +A ++YEL+++V+ +E I+GW+ATG+++ H+ +IHEYY+RE
Sbjct: 149 DMEFAKNMYELHKKVSPNELILGWYATGHDITEHSVLIHEYYSRE 193
>BT006894-1|AAP35540.1| 357|Homo sapiens eukaryotic translation
initiation factor 3, subunit 5 epsilon, 47kDa protein.
Length = 357
Score = 135 bits (326), Expect = 3e-32
Identities = 58/105 (55%), Positives = 82/105 (78%)
Frame = +1
Query: 7 GLSVKVHPVVLFQIVDAYERRNADSHRVIGTLLGTSDKGVVEVTNCFCVPHKEHADQVEA 186
G V++HPV+L IVD+YERRN + RVIGTLLGT DK VEVTNCF VPH E D+V
Sbjct: 89 GRVVRLHPVILASIVDSYERRNEGAARVIGTLLGTVDKHSVEVTNCFSVPHNESEDEVAV 148
Query: 187 ELNYAMDVYELNRRVNASENIVGWWATGNEVRNHASVIHEYYTRE 321
++ +A ++YEL+++V+ +E I+GW+ATG+++ H+ +IHEYY+RE
Sbjct: 149 DMEFAKNMYELHKKVSPNELILGWYATGHDITEHSVLIHEYYSRE 193
>BC000490-1|AAH00490.1| 357|Homo sapiens eukaryotic translation
initiation factor 3, subunit 5 epsilon, 47kDa protein.
Length = 357
Score = 135 bits (326), Expect = 3e-32
Identities = 58/105 (55%), Positives = 82/105 (78%)
Frame = +1
Query: 7 GLSVKVHPVVLFQIVDAYERRNADSHRVIGTLLGTSDKGVVEVTNCFCVPHKEHADQVEA 186
G V++HPV+L IVD+YERRN + RVIGTLLGT DK VEVTNCF VPH E D+V
Sbjct: 89 GRVVRLHPVILASIVDSYERRNEGAARVIGTLLGTVDKHSVEVTNCFSVPHNESEDEVAV 148
Query: 187 ELNYAMDVYELNRRVNASENIVGWWATGNEVRNHASVIHEYYTRE 321
++ +A ++YEL+++V+ +E I+GW+ATG+++ H+ +IHEYY+RE
Sbjct: 149 DMEFAKNMYELHKKVSPNELILGWYATGHDITEHSVLIHEYYSRE 193
>AK095574-1|BAC04577.1| 350|Homo sapiens protein ( Homo sapiens
cDNA FLJ38255 fis, clone FCBBF3001020, highly similar to
EUKARYOTIC TRANSLATION INITIATION FACTOR 3 SUBUNIT 5. ).
Length = 350
Score = 135 bits (326), Expect = 3e-32
Identities = 58/105 (55%), Positives = 82/105 (78%)
Frame = +1
Query: 7 GLSVKVHPVVLFQIVDAYERRNADSHRVIGTLLGTSDKGVVEVTNCFCVPHKEHADQVEA 186
G V++HPV+L IVD+YERRN + RVIGTLLGT DK VEVTNCF VPH E D+V
Sbjct: 82 GRVVRLHPVILASIVDSYERRNEGAARVIGTLLGTVDKHSVEVTNCFSVPHNESEDEVAV 141
Query: 187 ELNYAMDVYELNRRVNASENIVGWWATGNEVRNHASVIHEYYTRE 321
++ +A ++YEL+++V+ +E I+GW+ATG+++ H+ +IHEYY+RE
Sbjct: 142 DMEFAKNMYELHKKVSPNELILGWYATGHDITEHSVLIHEYYSRE 186
>AF354444-1|AAK18634.1| 348|Homo sapiens IFP38 protein.
Length = 348
Score = 119 bits (286), Expect = 2e-27
Identities = 53/105 (50%), Positives = 80/105 (76%)
Frame = +1
Query: 7 GLSVKVHPVVLFQIVDAYERRNADSHRVIGTLLGTSDKGVVEVTNCFCVPHKEHADQVEA 186
G V++HPV+L VD+YERRN + RVIGTLLGT +K VEVTNCF V + E +D+V
Sbjct: 79 GRVVRLHPVLLASTVDSYERRNKGAARVIGTLLGTVNKHSVEVTNCFSVSYNE-SDEVVV 137
Query: 187 ELNYAMDVYELNRRVNASENIVGWWATGNEVRNHASVIHEYYTRE 321
++ +A ++YEL+++V+ +E I+GW+A G+++ H+ +IHEYY+RE
Sbjct: 138 DMEFAKNMYELHKKVSPNELILGWYAAGHDITEHSVLIHEYYSRE 182
>D50063-1|BAA08780.1| 324|Homo sapiens proteasome subunit p40 /
Mov34 protein protein.
Length = 324
Score = 71.7 bits (168), Expect = 5e-13
Identities = 41/108 (37%), Positives = 63/108 (58%), Gaps = 5/108 (4%)
Frame = +1
Query: 16 VKVHPVVLFQIVDAYER--RNADSHRVIGTLLGTSDKGVVEVTNCFCVPHKEHA--DQVE 183
V VHP+VL +VD + R + + RV+G LLG+ K V++V+N F VP E D V
Sbjct: 9 VVVHPLVLLSVVDHFNRIVKVGNQKRVVGVLLGSWQKKVLDVSNSFAVPFDEDDKDDSVW 68
Query: 184 -AELNYAMDVYELNRRVNASENIVGWWATGNEVRNHASVIHEYYTREC 324
+ +Y ++Y + ++VNA E IVGW+ TG ++ + I+E R C
Sbjct: 69 FLDHDYLENMYGMFKKVNARERIVGWYHTGPKLHKNDIAINELMKRYC 116
>BC012606-1|AAH12606.1| 324|Homo sapiens proteasome (prosome,
macropain) 26S subunit, non-ATPase, 7 (Mov34 homolog)
protein.
Length = 324
Score = 71.7 bits (168), Expect = 5e-13
Identities = 41/108 (37%), Positives = 63/108 (58%), Gaps = 5/108 (4%)
Frame = +1
Query: 16 VKVHPVVLFQIVDAYER--RNADSHRVIGTLLGTSDKGVVEVTNCFCVPHKEHA--DQVE 183
V VHP+VL +VD + R + + RV+G LLG+ K V++V+N F VP E D V
Sbjct: 9 VVVHPLVLLSVVDHFNRIGKVGNQKRVVGVLLGSWQKKVLDVSNSFAVPFDEDDKDDSVW 68
Query: 184 -AELNYAMDVYELNRRVNASENIVGWWATGNEVRNHASVIHEYYTREC 324
+ +Y ++Y + ++VNA E IVGW+ TG ++ + I+E R C
Sbjct: 69 FLDHDYLENMYGMFKKVNARERIVGWYHTGPKLHKNDIAINELMKRYC 116
>BC000338-1|AAH00338.1| 326|Homo sapiens PSMD7 protein protein.
Length = 326
Score = 71.7 bits (168), Expect = 5e-13
Identities = 41/108 (37%), Positives = 63/108 (58%), Gaps = 5/108 (4%)
Frame = +1
Query: 16 VKVHPVVLFQIVDAYER--RNADSHRVIGTLLGTSDKGVVEVTNCFCVPHKEHA--DQVE 183
V VHP+VL +VD + R + + RV+G LLG+ K V++V+N F VP E D V
Sbjct: 9 VVVHPLVLLSVVDHFNRIGKVGNQKRVVGVLLGSWQKKVLDVSNSFAVPFDEDDKDDSVW 68
Query: 184 -AELNYAMDVYELNRRVNASENIVGWWATGNEVRNHASVIHEYYTREC 324
+ +Y ++Y + ++VNA E IVGW+ TG ++ + I+E R C
Sbjct: 69 FLDHDYLENMYGMFKKVNARERIVGWYHTGPKLHKNDIAINELMKRYC 116
>AF092576-1|AAC84044.1| 352|Homo sapiens translation initiation
factor eIF3 p40 subunit protein.
Length = 352
Score = 49.6 bits (113), Expect = 2e-06
Identities = 26/82 (31%), Positives = 40/82 (48%)
Frame = +1
Query: 16 VKVHPVVLFQIVDAYERRNADSHRVIGTLLGTSDKGVVEVTNCFCVPHKEHADQVEAELN 195
V++ +V+ +I+ Y+ + V G LLG K +E+TNCF P D E+
Sbjct: 39 VQIDGLVVLKIIKHYQEEGQGTEVVQGVLLGLVVKDRLEITNCFPFPQHTEDDADFDEVQ 98
Query: 196 YAMDVYELNRRVNASENIVGWW 261
Y M++ R VN VGW+
Sbjct: 99 YQMEMMRSLRHVNIDHLHVGWY 120
>U54559-1|AAD03465.1| 352|Homo sapiens translation initiation
factor eIF3 p40 subunit protein.
Length = 352
Score = 48.0 bits (109), Expect = 7e-06
Identities = 25/82 (30%), Positives = 40/82 (48%)
Frame = +1
Query: 16 VKVHPVVLFQIVDAYERRNADSHRVIGTLLGTSDKGVVEVTNCFCVPHKEHADQVEAELN 195
V++ +V+ +I+ Y+ + V G LLG + +E+TNCF P D E+
Sbjct: 39 VQIDGLVVLKIIKHYQEEGQGTEVVQGVLLGLVVEDRLEITNCFPFPQHTEDDADFDEVQ 98
Query: 196 YAMDVYELNRRVNASENIVGWW 261
Y M++ R VN VGW+
Sbjct: 99 YQMEMMRSLRHVNIDHLHVGWY 120
>CR456906-1|CAG33187.1| 352|Homo sapiens EIF3S3 protein.
Length = 352
Score = 48.0 bits (109), Expect = 7e-06
Identities = 25/82 (30%), Positives = 40/82 (48%)
Frame = +1
Query: 16 VKVHPVVLFQIVDAYERRNADSHRVIGTLLGTSDKGVVEVTNCFCVPHKEHADQVEAELN 195
V++ +V+ +I+ Y+ + V G LLG + +E+TNCF P D E+
Sbjct: 39 VQIDGLVVLKIIKHYQEEGQGTEVVQGVLLGLVVEDRLEITNCFPFPQHTEDDADFDEVQ 98
Query: 196 YAMDVYELNRRVNASENIVGWW 261
Y M++ R VN VGW+
Sbjct: 99 YQMEMMRSLRHVNIDHLHVGWY 120
>BT019594-1|AAV38401.1| 352|Homo sapiens eukaryotic translation
initiation factor 3, subunit 3 gamma, 40kDa protein.
Length = 352
Score = 48.0 bits (109), Expect = 7e-06
Identities = 25/82 (30%), Positives = 40/82 (48%)
Frame = +1
Query: 16 VKVHPVVLFQIVDAYERRNADSHRVIGTLLGTSDKGVVEVTNCFCVPHKEHADQVEAELN 195
V++ +V+ +I+ Y+ + V G LLG + +E+TNCF P D E+
Sbjct: 39 VQIDGLVVLKIIKHYQEEGQGTEVVQGVLLGLVVEDRLEITNCFPFPQHTEDDADFDEVQ 98
Query: 196 YAMDVYELNRRVNASENIVGWW 261
Y M++ R VN VGW+
Sbjct: 99 YQMEMMRSLRHVNIDHLHVGWY 120
>BC000386-1|AAH00386.1| 352|Homo sapiens eukaryotic translation
initiation factor 3, subunit 3 gamma, 40kDa protein.
Length = 352
Score = 48.0 bits (109), Expect = 7e-06
Identities = 25/82 (30%), Positives = 40/82 (48%)
Frame = +1
Query: 16 VKVHPVVLFQIVDAYERRNADSHRVIGTLLGTSDKGVVEVTNCFCVPHKEHADQVEAELN 195
V++ +V+ +I+ Y+ + V G LLG + +E+TNCF P D E+
Sbjct: 39 VQIDGLVVLKIIKHYQEEGQGTEVVQGVLLGLVVEDRLEITNCFPFPQHTEDDADFDEVQ 98
Query: 196 YAMDVYELNRRVNASENIVGWW 261
Y M++ R VN VGW+
Sbjct: 99 YQMEMMRSLRHVNIDHLHVGWY 120
>AK222620-1|BAD96340.1| 352|Homo sapiens eukaryotic translation
initiation factor 3, subunit 3 gamma, 40kDa variant
protein.
Length = 352
Score = 48.0 bits (109), Expect = 7e-06
Identities = 25/82 (30%), Positives = 40/82 (48%)
Frame = +1
Query: 16 VKVHPVVLFQIVDAYERRNADSHRVIGTLLGTSDKGVVEVTNCFCVPHKEHADQVEAELN 195
V++ +V+ +I+ Y+ + V G LLG + +E+TNCF P D E+
Sbjct: 39 VQIDGLVVLKIIKHYQEEGQGTEVVQGVLLGLVVEDRLEITNCFPFPQHTEDDADFDEVQ 98
Query: 196 YAMDVYELNRRVNASENIVGWW 261
Y M++ R VN VGW+
Sbjct: 99 YQMEMMRSLRHVNIDHLHVGWY 120
>AK222520-1|BAD96240.1| 352|Homo sapiens eukaryotic translation
initiation factor 3, subunit 3 gamma, 40kDa variant
protein.
Length = 352
Score = 48.0 bits (109), Expect = 7e-06
Identities = 25/82 (30%), Positives = 40/82 (48%)
Frame = +1
Query: 16 VKVHPVVLFQIVDAYERRNADSHRVIGTLLGTSDKGVVEVTNCFCVPHKEHADQVEAELN 195
V++ +V+ +I+ Y+ + V G LLG + +E+TNCF P D E+
Sbjct: 39 VQIDGLVVLKIIKHYQEEGQGTEVVQGVLLGLVVEDRLEITNCFPFPQHTEDDADFDEVQ 98
Query: 196 YAMDVYELNRRVNASENIVGWW 261
Y M++ R VN VGW+
Sbjct: 99 YQMEMMRSLRHVNIDHLHVGWY 120
>BC090880-1|AAH90880.1| 349|Homo sapiens EIF3H protein protein.
Length = 349
Score = 41.9 bits (94), Expect = 4e-04
Identities = 25/82 (30%), Positives = 39/82 (47%)
Frame = +1
Query: 16 VKVHPVVLFQIVDAYERRNADSHRVIGTLLGTSDKGVVEVTNCFCVPHKEHADQVEAELN 195
V++ +V+F+ Y+ + V G LLG + +E+TNCF P D E+
Sbjct: 39 VQIDGLVVFK---HYQEEGQGTEVVQGVLLGLVVEDRLEITNCFPFPQHTEDDADFDEVQ 95
Query: 196 YAMDVYELNRRVNASENIVGWW 261
Y M++ R VN VGW+
Sbjct: 96 YQMEMMRSLRHVNIDHLHVGWY 117
>U70735-1|AAD03469.1| 297|Homo sapiens 34 kDa Mov34 homolog
protein.
Length = 297
Score = 40.3 bits (90), Expect = 0.001
Identities = 25/90 (27%), Positives = 43/90 (47%), Gaps = 3/90 (3%)
Frame = +1
Query: 10 LSVKVHPVVLFQIVDAYERRNADSHR---VIGTLLGTSDKGVVEVTNCFCVPHKEHADQV 180
+SV +HP+V+ I D + R + R VIG L+G + +EV N F + +++
Sbjct: 9 VSVALHPLVILNISDHWIRMRSQEGRPVQVIGALIGKQEGRNIEVMNSFELLSHTVEEKI 68
Query: 181 EAELNYAMDVYELNRRVNASENIVGWWATG 270
+ Y E ++V +GW+ TG
Sbjct: 69 IIDKEYYYTKEEQFKQVFKELEFLGWYTTG 98
>BC002520-1|AAH02520.2| 327|Homo sapiens COP9 constitutive
photomorphogenic homolog subunit 6 (Arabidopsis)
protein.
Length = 327
Score = 40.3 bits (90), Expect = 0.001
Identities = 25/90 (27%), Positives = 43/90 (47%), Gaps = 3/90 (3%)
Frame = +1
Query: 10 LSVKVHPVVLFQIVDAYERRNADSHR---VIGTLLGTSDKGVVEVTNCFCVPHKEHADQV 180
+SV +HP+V+ I D + R + R VIG L+G + +EV N F + +++
Sbjct: 39 VSVALHPLVILNISDHWIRMRSQEGRPVQVIGALIGKQEGRNIEVMNSFELLSHTVEEKI 98
Query: 181 EAELNYAMDVYELNRRVNASENIVGWWATG 270
+ Y E ++V +GW+ TG
Sbjct: 99 IIDKEYYYTKEEQFKQVFKELEFLGWYTTG 128
>AB032953-1|BAA86441.2| 2144|Homo sapiens KIAA1127 protein protein.
Length = 2144
Score = 30.7 bits (66), Expect = 1.1
Identities = 17/47 (36%), Positives = 27/47 (57%)
Frame = +1
Query: 4 RGLSVKVHPVVLFQIVDAYERRNADSHRVIGTLLGTSDKGVVEVTNC 144
RG++V + ++ F VDA R D + +I TLLG++D V +C
Sbjct: 729 RGIAVDKNGLMYF--VDATMIRKVDQNGIISTLLGSNDLTAVRPLSC 773
Database: human
Posted date: Oct 23, 2007 1:18 PM
Number of letters in database: 76,859,062
Number of sequences in database: 237,096
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 45,615,421
Number of Sequences: 237096
Number of extensions: 846253
Number of successful extensions: 1626
Number of sequences better than 10.0: 20
Number of HSP's better than 10.0 without gapping: 1550
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 1619
length of database: 76,859,062
effective HSP length: 79
effective length of database: 58,128,478
effective search space used: 1685725862
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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