Samia BLAST Result against bee

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= S06A01NCLL0023_J03
         (326 letters)

Database: bee 
           438 sequences; 146,343 total letters

Searching......................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

EF625898-1|ABR45905.1|  686|Apis mellifera hexamerin protein.          23   0.94 
AB207270-1|BAE72137.1|  429|Apis mellifera broad-complex protein.      23   0.94 
EF589162-1|ABQ84439.1|  686|Apis mellifera hexamerin 70c protein.      23   1.2  
AB270697-1|BAF75928.1|  735|Apis mellifera FoxP protein protein.       21   2.9  
DQ151547-1|ABA39280.1|  405|Apis mellifera tyramine receptor pro...    21   5.0  
AY268031-1|AAP23056.1|  810|Apis mellifera dorsal protein splice...    21   5.0  
AY268030-1|AAP23055.1|  602|Apis mellifera dorsal protein protein.     21   5.0  
AB231585-1|BAE17127.1|  898|Apis mellifera Mahya protein.              21   5.0  

>EF625898-1|ABR45905.1|  686|Apis mellifera hexamerin protein.
          Length = 686

 Score = 23.0 bits (47), Expect = 0.94
 Identities = 15/86 (17%), Positives = 34/86 (39%)
 Frame = +1

Query: 19  KVHPVVLFQIVDAYERRNADSHRVIGTLLGTSDKGVVEVTNCFCVPHKEHADQVEAELNY 198
           +++P   F      E +N    R    + G ++     V   +   +    +  E +L+Y
Sbjct: 164 EIYPNYFFDSSVIEEAQNLKMSRGSSVVTGMNNIETYIVNTNYSSKYMREYNDPEYKLDY 223

Query: 199 AMDVYELNRRVNASENIVGWWATGNE 276
            M+  ELN        ++ +W + ++
Sbjct: 224 FMEDVELNAYYYYMREMLPYWMSSSQ 249


>AB207270-1|BAE72137.1|  429|Apis mellifera broad-complex protein.
          Length = 429

 Score = 23.0 bits (47), Expect = 0.94
 Identities = 9/13 (69%), Positives = 10/13 (76%)
 Frame = +2

Query: 224 DELMHLRTLLAGG 262
           DEL H+R L AGG
Sbjct: 125 DELSHVRALAAGG 137


>EF589162-1|ABQ84439.1|  686|Apis mellifera hexamerin 70c protein.
          Length = 686

 Score = 22.6 bits (46), Expect = 1.2
 Identities = 15/86 (17%), Positives = 34/86 (39%)
 Frame = +1

Query: 19  KVHPVVLFQIVDAYERRNADSHRVIGTLLGTSDKGVVEVTNCFCVPHKEHADQVEAELNY 198
           +++P   F      E +N    R    + G ++     V   +   +    +  E +L+Y
Sbjct: 164 EIYPNYFFDSSVIEEAQNLKMSRGSSVVTGMNNIETYIVNTNYSSKNMREYNDPEYKLDY 223

Query: 199 AMDVYELNRRVNASENIVGWWATGNE 276
            M+  ELN        ++ +W + ++
Sbjct: 224 FMEDVELNAYYYYMREMLPYWMSSSQ 249


>AB270697-1|BAF75928.1|  735|Apis mellifera FoxP protein protein.
          Length = 735

 Score = 21.4 bits (43), Expect = 2.9
 Identities = 7/12 (58%), Positives = 9/12 (75%)
 Frame = -1

Query: 266 VAHQPTMFSDAL 231
           + H PTM+ DAL
Sbjct: 602 LTHSPTMYGDAL 613


>DQ151547-1|ABA39280.1|  405|Apis mellifera tyramine receptor
           protein.
          Length = 405

 Score = 20.6 bits (41), Expect = 5.0
 Identities = 8/17 (47%), Positives = 11/17 (64%)
 Frame = +1

Query: 193 NYAMDVYELNRRVNASE 243
           NY  DVY+ N  V++ E
Sbjct: 7   NYYGDVYQWNHTVSSGE 23


>AY268031-1|AAP23056.1|  810|Apis mellifera dorsal protein splice
           variant B protein.
          Length = 810

 Score = 20.6 bits (41), Expect = 5.0
 Identities = 7/18 (38%), Positives = 12/18 (66%)
 Frame = -3

Query: 318 PSIVLVNYRGMISHLISC 265
           P+I +V Y+G    ++SC
Sbjct: 85  PTIKIVGYKGRALVVVSC 102


>AY268030-1|AAP23055.1|  602|Apis mellifera dorsal protein protein.
          Length = 602

 Score = 20.6 bits (41), Expect = 5.0
 Identities = 7/18 (38%), Positives = 12/18 (66%)
 Frame = -3

Query: 318 PSIVLVNYRGMISHLISC 265
           P+I +V Y+G    ++SC
Sbjct: 85  PTIKIVGYKGRALVVVSC 102



 Score = 20.2 bits (40), Expect = 6.6
 Identities = 7/29 (24%), Positives = 17/29 (58%)
 Frame = +1

Query: 223 RRVNASENIVGWWATGNEVRNHASVIHEY 309
           +++N S+N +       E   HA+++++Y
Sbjct: 338 QKINNSQNALVLRHVQAEAEKHAAMLYQY 366


>AB231585-1|BAE17127.1|  898|Apis mellifera Mahya protein.
          Length = 898

 Score = 20.6 bits (41), Expect = 5.0
 Identities = 8/13 (61%), Positives = 11/13 (84%)
 Frame = +2

Query: 146 SACRTKSTLTKSR 184
           +AC + S+LTKSR
Sbjct: 134 AACHSGSSLTKSR 146


  Database: bee
    Posted date:  Oct 23, 2007  1:17 PM
  Number of letters in database: 146,343
  Number of sequences in database:  438
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 86,250
Number of Sequences: 438
Number of extensions: 1538
Number of successful extensions: 9
Number of sequences better than 10.0: 8
Number of HSP's better than 10.0 without gapping: 8
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 9
length of database: 146,343
effective HSP length: 50
effective length of database: 124,443
effective search space used:  7217694
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 39 (20.8 bits)